RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SMIM5Q71RC9 77 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 WFDC10BQ8IUB3 73 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 TMEM263Q8WUH6 116 aaKnown RBP-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 C1orf54Q8WWF1 131 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 TSLPQ969D9 159 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 TRGV9Q99603 122 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 NOP10Q9NPE3 64 aaKnown RBP-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 KAAG1Q9UBP8 84 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 SCN11AQ9UI33 1791 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 LY75O60449 1722 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 C4AP0C0L4 1744 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 C4BP0C0L5 1744 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 TJP1Q07157 1748 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 PKD1L3Q7Z443 1732 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 NALCNQ8IZF0 1738 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 PARP4Q9UKK3 1724 aaKnown RBP-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 TOGARAM1Q9Y4F4 1720 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 MYOM1P52179 1685 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 ZNF831Q5JPB2 1677 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 TMEM131LA2VDJ0 1609 aa-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.27□□□□□ -2.45
HMGB1P29-201ENST00000505659 EIF4G3O43432 1585 aaKnown RBP-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 TRPM2O94759 1503 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 NFAT5O94916 1531 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 MRC2Q9UBG0 1479 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 NSD3Q9BZ95 1437 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 PLIN4Q96Q06 1357 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 KIF20BQ96Q89 1820 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 LOC100130705A0A1B0GUX0 176 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 CHKB-CPT1BH3BT56 60 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 H3BUX3 64 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 M0QY20 66 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 C3orf79P0CE67 100 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 FCER1GP30273 86 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 MRPS10P82664 201 aaKnown RBP-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 TFF3Q07654 80 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 DEFB114Q30KQ6 69 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 PSMG4Q5JS54 123 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 NCMAPQ5T1S8 102 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 C10orf113Q5VZT2 155 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 NCBP2-AS2Q69YL0 99 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 SFTA2Q6UW10 78 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 LCN9Q8WX39 176 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 USMG5Q96IX5 58 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 SMIM2Q9BVW6 85 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 RHPN1-AS1Q9BWJ2 59 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 PRO1933Q9H354 126 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 NXT2Q9NPJ8 142 aaKnown RBP-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 ANKRD36CQ5JPF3 1778 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 NRAPQ86VF7 1730 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 ROBO1Q9Y6N7 1651 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 PLXNC1O60486 1568 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 PEG3Q9GZU2 1588 aa-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.28□□□□□ -2.45
HMGB1P29-201ENST00000505659 NRXN1Q9ULB1 1477 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 EEA1Q15075 1411 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 VPS8Q8N3P4 1428 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 FOCADQ5VW36 1801 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 XRN1Q8IZH2 1706 aaKnown RBP-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABCA3Q99758 1704 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 KIAA1551Q9HCM1 1747 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 A0A1B0GU69 56 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 ETDCA0A1B0GVM5 59 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 SMIM27A0A1W2PRY6 76 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 hADV29S1A0JD25 119 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 D6R8Y8 96 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 H3BUT2 72 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 K7EMI3 77 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 NDUFA2O43678 99 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 LEPROTL1O95214 131 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 SNCAP37840 140 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 ATP5EP56381 51 aaPredicted RBP-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEFB131AP59861 70 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 SEC11AP67812 179 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 TDRG1Q3Y452 100 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 NMSQ5H8A3 153 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 MINOS1Q5TGZ0 78 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 DEFB108BQ8NET1 73 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 C20orf78Q9BR46 151 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 C2orf88Q9BSF0 95 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 SNHG12Q9BXW3 62 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 PSENENQ9NZ42 101 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 TOMM7Q9P0U1 55 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 ABRACLQ9P1F3 81 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 LINC00474Q9P2X8 69 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 HILPDAQ9Y5L2 63 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 KIAA0556O60303 1618 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 KIF21BO75037 1637 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 SHROOM2Q13796 1616 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 SETBP1Q9Y6X0 1596 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 CLASP1Q7Z460 1538 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 DOCK2Q92608 1830 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 ERVK-7P63135 1459 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 TEX14Q8IWB6 1497 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 CD163L1Q9NR16 1453 aa-0.29□□□□□ -2.46
HMGB1P29-201ENST00000505659 SUPT6HQ7KZ85 1726 aaKnown RBP-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 CUL7Q14999 1698 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 PLCH1Q4KWH8 1693 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 SCRIBQ14160 1630 aa-0.3□□□□□ -2.46
HMGB1P29-201ENST00000505659 GLI2P10070 1586 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms