RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 C4orf48Q5BLP8 95 aa7.26□□□□□ -1.25
SNCA-208ENST00000505199 Q8N377 158 aa7.26□□□□□ -1.25
SNCA-208ENST00000505199 IGLV9-49A0A0B4J1Y8 123 aa7.25□□□□□ -1.25
SNCA-208ENST00000505199 MOBPQ13875 183 aa7.25□□□□□ -1.25
SNCA-208ENST00000505199 SMIM29Q86T20 159 aa7.25□□□□□ -1.25
SNCA-208ENST00000505199 DNAL4O96015 105 aa7.24□□□□□ -1.25
SNCA-208ENST00000505199 TRACP01848 142 aa7.24□□□□□ -1.25
SNCA-208ENST00000505199 CD164Q04900 197 aa7.24□□□□□ -1.25
SNCA-208ENST00000505199 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
SNCA-208ENST00000505199 LYRM7Q5U5X0 104 aa7.24□□□□□ -1.25
SNCA-208ENST00000505199 DEFB105AQ8NG35 78 aa7.24□□□□□ -1.25
SNCA-208ENST00000505199 FAM218AQ96MZ4 157 aa7.24□□□□□ -1.25
SNCA-208ENST00000505199 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
SNCA-208ENST00000505199 F8WEM9 126 aa7.23□□□□□ -1.25
SNCA-208ENST00000505199 C9orf153Q5TBE3 101 aa7.23□□□□□ -1.25
SNCA-208ENST00000505199 Q6JHZ5 121 aa7.22□□□□□ -1.25
SNCA-208ENST00000505199 LST1O00453 97 aa7.21□□□□□ -1.26
SNCA-208ENST00000505199 SCGB1C2P0DMR2 95 aa7.21□□□□□ -1.26
SNCA-208ENST00000505199 TMEM256-PLSCR3K7ERE1 68 aa7.2□□□□□ -1.26
SNCA-208ENST00000505199 SNHG12Q9BXW3 62 aa7.2□□□□□ -1.26
SNCA-208ENST00000505199 ORMDL1Q9P0S3 153 aa7.2□□□□□ -1.26
SNCA-208ENST00000505199 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
SNCA-208ENST00000505199 CLEC2BQ92478 149 aa7.19□□□□□ -1.26
SNCA-208ENST00000505199 Q5XG85 94 aa7.18□□□□□ -1.26
SNCA-208ENST00000505199 HERC1Q15751 4861 aa7.18□□□□□ -1.26
SNCA-208ENST00000505199 BATFQ16520 125 aa7.17□□□□□ -1.26
SNCA-208ENST00000505199 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
SNCA-208ENST00000505199 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
SNCA-208ENST00000505199 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
SNCA-208ENST00000505199 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
SNCA-208ENST00000505199 UBE2V1Q13404 147 aa7.15□□□□□ -1.26
SNCA-208ENST00000505199 FP248Q71RG6 208 aaPredicted RBP7.15□□□□□ -1.26
SNCA-208ENST00000505199 COL5A1-AS1Q5SY13 56 aa7.14□□□□□ -1.27
SNCA-208ENST00000505199 FABP2P12104 132 aa7.13□□□□□ -1.27
SNCA-208ENST00000505199 Q6Q795 121 aa7.13□□□□□ -1.27
SNCA-208ENST00000505199 H3BUT2 72 aa7.12□□□□□ -1.27
SNCA-208ENST00000505199 TAX1BP3O14907 124 aa7.12□□□□□ -1.27
SNCA-208ENST00000505199 TCL1BO95988 128 aa7.12□□□□□ -1.27
SNCA-208ENST00000505199 H3BMG7 143 aa7.11□□□□□ -1.27
SNCA-208ENST00000505199 IGFL1Q6UW32 110 aa7.11□□□□□ -1.27
SNCA-208ENST00000505199 A0A1W2PPM0 123 aa7.1□□□□□ -1.27
SNCA-208ENST00000505199 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
SNCA-208ENST00000505199 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
SNCA-208ENST00000505199 TRBV7-7A0A0K0K1E9 115 aa7.07□□□□□ -1.28
SNCA-208ENST00000505199 BAALC-AS2P0C853 105 aa7.07□□□□□ -1.28
SNCA-208ENST00000505199 PRR4Q16378 134 aa7.07□□□□□ -1.28
SNCA-208ENST00000505199 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
SNCA-208ENST00000505199 ANKRD29Q8N6D5 301 aa7.07□□□□□ -1.28
SNCA-208ENST00000505199 NAA38Q9BRA0 125 aaKnown RBP7.07□□□□□ -1.28
SNCA-208ENST00000505199 SS18L2Q9UHA2 77 aa7.07□□□□□ -1.28
SNCA-208ENST00000505199 JMJD7-PLA2G4BH0Y9G9 81 aa7.06□□□□□ -1.28
SNCA-208ENST00000505199 TRBV7-4A0A0J9YYF1 115 aa7.05□□□□□ -1.28
SNCA-208ENST00000505199 RBM3P98179 157 aaKnown RBP7.05□□□□□ -1.28
SNCA-208ENST00000505199 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
SNCA-208ENST00000505199 A0A1B0GW54 56 aa7.04□□□□□ -1.28
SNCA-208ENST00000505199 H3BT86 120 aa7.04□□□□□ -1.28
SNCA-208ENST00000505199 PDE6GP18545 87 aa7.04□□□□□ -1.28
SNCA-208ENST00000505199 HRCT1Q6UXD1 115 aa7.03□□□□□ -1.28
SNCA-208ENST00000505199 DSCR8Q96T75 97 aa7.03□□□□□ -1.28
SNCA-208ENST00000505199 RETNLBQ9BQ08 111 aa7.02□□□□□ -1.29
SNCA-208ENST00000505199 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.29
SNCA-208ENST00000505199 C9JAW5 83 aa7.01□□□□□ -1.29
SNCA-208ENST00000505199 SPCS1Q9Y6A9 102 aa7.01□□□□□ -1.29
SNCA-208ENST00000505199 A0A0G2JQZ4 141 aa7□□□□□ -1.29
SNCA-208ENST00000505199 OBSCN-AS1Q96MR7 158 aa7□□□□□ -1.29
SNCA-208ENST00000505199 C1orf195Q5TG92 126 aa6.99□□□□□ -1.29
SNCA-208ENST00000505199 LOC110117498A0A087WWA1 95 aa6.98□□□□□ -1.29
SNCA-208ENST00000505199 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
SNCA-208ENST00000505199 CCKP06307 115 aa6.98□□□□□ -1.29
SNCA-208ENST00000505199 K7EP34 96 aa6.97□□□□□ -1.29
SNCA-208ENST00000505199 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
SNCA-208ENST00000505199 GTF2H5Q6ZYL4 71 aa6.97□□□□□ -1.29
SNCA-208ENST00000505199 A0A087WSZ3 146 aa6.96□□□□□ -1.3
SNCA-208ENST00000505199 CDIP1Q9H305 208 aa6.94□□□□□ -1.3
SNCA-208ENST00000505199 Q6ZQT0 140 aa6.93□□□□□ -1.3
SNCA-208ENST00000505199 F8W1H4 67 aa6.91□□□□□ -1.3
SNCA-208ENST00000505199 A0A1B0GV72 72 aa6.9□□□□□ -1.3
SNCA-208ENST00000505199 PRO0461Q9UI25 63 aa6.9□□□□□ -1.3
SNCA-208ENST00000505199 C14orf132Q9NPU4 83 aa6.89□□□□□ -1.31
SNCA-208ENST00000505199 LRP2P98164 4655 aa6.88□□□□□ -1.31
SNCA-208ENST00000505199 A0A1B0GV90 55 aa6.88□□□□□ -1.31
SNCA-208ENST00000505199 Q96NJ1 140 aa6.88□□□□□ -1.31
SNCA-208ENST00000505199 XP32Q5T750 250 aa6.87□□□□□ -1.31
SNCA-208ENST00000505199 VPS25Q9BRG1 176 aa6.87□□□□□ -1.31
SNCA-208ENST00000505199 LINC00472Q9H8W2 130 aa6.87□□□□□ -1.31
SNCA-208ENST00000505199 J3KT08 172 aa6.86□□□□□ -1.31
SNCA-208ENST00000505199 SMCPP49901 116 aaPredicted RBP6.86□□□□□ -1.31
SNCA-208ENST00000505199 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
SNCA-208ENST00000505199 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
SNCA-208ENST00000505199 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
SNCA-208ENST00000505199 LPAP08519 4548 aa6.82□□□□□ -1.32
SNCA-208ENST00000505199 IGKV4-1P06312 121 aa6.81□□□□□ -1.32
SNCA-208ENST00000505199 NREPQ16612 68 aa6.79□□□□□ -1.32
SNCA-208ENST00000505199 SIGMAR1Q99720 223 aa6.79□□□□□ -1.32
SNCA-208ENST00000505199 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
SNCA-208ENST00000505199 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
SNCA-208ENST00000505199 NDUFB1O75438 58 aa6.77□□□□□ -1.33
SNCA-208ENST00000505199 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
SNCA-208ENST00000505199 ETDBQ3ZM63 59 aa6.76□□□□□ -1.33
SNCA-208ENST00000505199 Q75L30 129 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms