RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TYMSOSQ8TAI1 123 aa7.01□□□□□ -1.29
PDLIM5-208ENST00000504489 SLC25A20O43772 301 aa7□□□□□ -1.29
PDLIM5-208ENST00000504489 SPRR1BP22528 89 aa7□□□□□ -1.29
PDLIM5-208ENST00000504489 H0YGX0 51 aa6.99□□□□□ -1.29
PDLIM5-208ENST00000504489 M0R143 59 aa6.99□□□□□ -1.29
PDLIM5-208ENST00000504489 Q1RN00 199 aa6.99□□□□□ -1.29
PDLIM5-208ENST00000504489 hADV29S1A0JD25 119 aa6.98□□□□□ -1.29
PDLIM5-208ENST00000504489 K7ERJ3 54 aa6.98□□□□□ -1.29
PDLIM5-208ENST00000504489 C3orf22Q8N5N4 141 aa6.98□□□□□ -1.29
PDLIM5-208ENST00000504489 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
PDLIM5-208ENST00000504489 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.3
PDLIM5-208ENST00000504489 LINC01547P58512 204 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-208ENST00000504489 TRIAP1O43715 76 aa6.95□□□□□ -1.3
PDLIM5-208ENST00000504489 TSPAN13O95857 204 aa6.95□□□□□ -1.3
PDLIM5-208ENST00000504489 DEFB105AQ8NG35 78 aa6.95□□□□□ -1.3
PDLIM5-208ENST00000504489 SNCGO76070 127 aa6.94□□□□□ -1.3
PDLIM5-208ENST00000504489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
PDLIM5-208ENST00000504489 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
PDLIM5-208ENST00000504489 LAMTOR3Q9UHA4 124 aa6.94□□□□□ -1.3
PDLIM5-208ENST00000504489 HERC1Q15751 4861 aa6.94□□□□□ -1.3
PDLIM5-208ENST00000504489 IGLV9-49A0A0B4J1Y8 123 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 A0A1B0GX51 115 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 PSMB2P49721 201 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 MOBPQ13875 183 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 Q6ZQY7 126 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 Q8N377 158 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 FAM218AQ96MZ4 157 aa6.93□□□□□ -1.3
PDLIM5-208ENST00000504489 COX6CP09669 75 aa6.92□□□□□ -1.3
PDLIM5-208ENST00000504489 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
PDLIM5-208ENST00000504489 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
PDLIM5-208ENST00000504489 Q8NBF4 154 aa6.91□□□□□ -1.3
PDLIM5-208ENST00000504489 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
PDLIM5-208ENST00000504489 PPDPFLQ8WWR9 84 aa6.9□□□□□ -1.3
PDLIM5-208ENST00000504489 OCIAD2Q56VL3 154 aa6.89□□□□□ -1.31
PDLIM5-208ENST00000504489 CLEC2BQ92478 149 aa6.89□□□□□ -1.31
PDLIM5-208ENST00000504489 BATFQ16520 125 aa6.87□□□□□ -1.31
PDLIM5-208ENST00000504489 SPINK1P00995 79 aa6.86□□□□□ -1.31
PDLIM5-208ENST00000504489 SCGB1C2P0DMR2 95 aa6.86□□□□□ -1.31
PDLIM5-208ENST00000504489 C9orf118A6NHY6 69 aa6.84□□□□□ -1.31
PDLIM5-208ENST00000504489 F8WEM9 126 aa6.84□□□□□ -1.31
PDLIM5-208ENST00000504489 LST1O00453 97 aa6.84□□□□□ -1.31
PDLIM5-208ENST00000504489 DNAL4O96015 105 aa6.84□□□□□ -1.31
PDLIM5-208ENST00000504489 TRACP01848 142 aa6.84□□□□□ -1.31
PDLIM5-208ENST00000504489 RPS29P62273 56 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-208ENST00000504489 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
PDLIM5-208ENST00000504489 IGLV8-61A0A075B6I0 122 aa6.83□□□□□ -1.32
PDLIM5-208ENST00000504489 H3BQ85 93 aa6.83□□□□□ -1.32
PDLIM5-208ENST00000504489 CD164Q04900 197 aa6.83□□□□□ -1.32
PDLIM5-208ENST00000504489 NAA38Q9BRA0 125 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-208ENST00000504489 ORMDL1Q9P0S3 153 aa6.82□□□□□ -1.32
PDLIM5-208ENST00000504489 NDUFV3P56181 108 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-208ENST00000504489 Q6JHZ5 121 aa6.81□□□□□ -1.32
PDLIM5-208ENST00000504489 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
PDLIM5-208ENST00000504489 LYRM7Q5U5X0 104 aa6.8□□□□□ -1.32
PDLIM5-208ENST00000504489 H3BUT2 72 aa6.79□□□□□ -1.32
PDLIM5-208ENST00000504489 TMEM256-PLSCR3K7ERE1 68 aa6.79□□□□□ -1.32
PDLIM5-208ENST00000504489 TCL1BO95988 128 aa6.79□□□□□ -1.32
PDLIM5-208ENST00000504489 FABP2P12104 132 aa6.79□□□□□ -1.32
PDLIM5-208ENST00000504489 ATXN8Q156A1 80 aa6.79□□□□□ -1.32
PDLIM5-208ENST00000504489 IGFL1Q6UW32 110 aa6.78□□□□□ -1.32
PDLIM5-208ENST00000504489 TRBV20-1A0A075B6N2 111 aa6.77□□□□□ -1.33
PDLIM5-208ENST00000504489 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
PDLIM5-208ENST00000504489 PRR4Q16378 134 aa6.77□□□□□ -1.33
PDLIM5-208ENST00000504489 HRCT1Q6UXD1 115 aa6.77□□□□□ -1.33
PDLIM5-208ENST00000504489 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
PDLIM5-208ENST00000504489 PCP4L1A6NKN8 68 aa6.76□□□□□ -1.33
PDLIM5-208ENST00000504489 H3BMG7 143 aa6.76□□□□□ -1.33
PDLIM5-208ENST00000504489 UBE2V1Q13404 147 aa6.76□□□□□ -1.33
PDLIM5-208ENST00000504489 COL5A1-AS1Q5SY13 56 aa6.76□□□□□ -1.33
PDLIM5-208ENST00000504489 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
PDLIM5-208ENST00000504489 LIMD2Q9BT23 127 aa6.76□□□□□ -1.33
PDLIM5-208ENST00000504489 HMCN2Q8NDA2 5059 aa6.76□□□□□ -1.33
PDLIM5-208ENST00000504489 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
PDLIM5-208ENST00000504489 Q5XG85 94 aa6.75□□□□□ -1.33
PDLIM5-208ENST00000504489 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
PDLIM5-208ENST00000504489 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
PDLIM5-208ENST00000504489 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-208ENST00000504489 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
PDLIM5-208ENST00000504489 TRBV7-7A0A0K0K1E9 115 aa6.71□□□□□ -1.34
PDLIM5-208ENST00000504489 Q6Q795 121 aa6.71□□□□□ -1.34
PDLIM5-208ENST00000504489 TEN1Q86WV5 123 aa6.71□□□□□ -1.34
PDLIM5-208ENST00000504489 ANKRD29Q8N6D5 301 aa6.71□□□□□ -1.34
PDLIM5-208ENST00000504489 C9JAW5 83 aa6.69□□□□□ -1.34
PDLIM5-208ENST00000504489 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
PDLIM5-208ENST00000504489 A0A1B0GV72 72 aa6.67□□□□□ -1.34
PDLIM5-208ENST00000504489 RBM3P98179 157 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-208ENST00000504489 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
PDLIM5-208ENST00000504489 LPAP08519 4548 aa6.66□□□□□ -1.34
PDLIM5-208ENST00000504489 TRBV7-4A0A0J9YYF1 115 aa6.66□□□□□ -1.34
PDLIM5-208ENST00000504489 A0A1W2PNM2 257 aa6.66□□□□□ -1.34
PDLIM5-208ENST00000504489 C1orf195Q5TG92 126 aa6.66□□□□□ -1.34
PDLIM5-208ENST00000504489 SPCS1Q9Y6A9 102 aa6.66□□□□□ -1.34
PDLIM5-208ENST00000504489 JMJD7-PLA2G4BH0Y9G9 81 aa6.65□□□□□ -1.34
PDLIM5-208ENST00000504489 H3BT86 120 aa6.65□□□□□ -1.34
PDLIM5-208ENST00000504489 DSCR8Q96T75 97 aa6.65□□□□□ -1.34
PDLIM5-208ENST00000504489 LRP2P98164 4655 aa6.65□□□□□ -1.35
PDLIM5-208ENST00000504489 SS18L2Q9UHA2 77 aa6.64□□□□□ -1.35
PDLIM5-208ENST00000504489 CCKP06307 115 aa6.63□□□□□ -1.35
PDLIM5-208ENST00000504489 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms