RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 TCTE3Q8IZS6 198 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 C20orf166-AS1Q96NR2 134 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 SMCO4Q9NRQ5 59 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 PRO0628Q9UI54 55 aa1.82□□□□□ -2.12
USP46-205ENST00000504078 C20orf202A1L168 122 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 LINC00614P0C842 121 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 S100A7L2Q5SY68 101 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 SMIM29Q86T20 159 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 BAGE3Q86Y29 109 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 RPS10P5Q9NQ39 176 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 SS18L2Q9UHA2 77 aa1.81□□□□□ -2.12
USP46-205ENST00000504078 TMEM223A0PJW6 202 aa1.8□□□□□ -2.12
USP46-205ENST00000504078 K7EMI3 77 aa1.8□□□□□ -2.12
USP46-205ENST00000504078 ZNF73O43830 326 aaPredicted RBP1.8□□□□□ -2.12
USP46-205ENST00000504078 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
USP46-205ENST00000504078 NDUFV3P56181 108 aaKnown RBP1.8□□□□□ -2.12
USP46-205ENST00000504078 SOSTDC1Q6X4U4 206 aa1.8□□□□□ -2.12
USP46-205ENST00000504078 ATP11AUNQ6ZP68 121 aa1.8□□□□□ -2.12
USP46-205ENST00000504078 RBM12B-AS1Q9P1G2 102 aa1.8□□□□□ -2.12
USP46-205ENST00000504078 LAMTOR3Q9UHA4 124 aa1.8□□□□□ -2.12
USP46-205ENST00000504078 TRBV20-1A0A075B6N2 111 aa1.79□□□□□ -2.12
USP46-205ENST00000504078 HBDP02042 147 aa1.79□□□□□ -2.12
USP46-205ENST00000504078 SCGB1A1P11684 91 aa1.79□□□□□ -2.12
USP46-205ENST00000504078 JOSD1Q15040 202 aaPredicted RBP1.79□□□□□ -2.12
USP46-205ENST00000504078 PEA15Q15121 130 aa1.79□□□□□ -2.12
USP46-205ENST00000504078 MIEN1Q9BRT3 115 aa1.79□□□□□ -2.12
USP46-205ENST00000504078 PRO1933Q9H354 126 aa1.79□□□□□ -2.12
USP46-205ENST00000504078 LINC00846Q9NV44 126 aa1.79□□□□□ -2.12
USP46-205ENST00000504078 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 NEBP20929 6669 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 SMIM26A0A096LP01 95 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 TSTD3H0UI37 97 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 SPRR1BP22528 89 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 SFTA2Q6UW10 78 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 OR13C6PQ8NH95 151 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 Q96NJ1 140 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 OCR1Q9BZK8 76 aa1.78□□□□□ -2.12
USP46-205ENST00000504078 TRBV10-2A0A0K0K1G8 114 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 LINC01546A6NGU7 62 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 MT-ND4LP03901 98 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 FABP9Q0Z7S8 132 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 PMAIP1Q13794 54 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 C6orf99Q4VX62 202 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 SLC25A34Q6PIV7 304 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 IGFL1Q6UW32 110 aa1.77□□□□□ -2.13
USP46-205ENST00000504078 MYMXA0A1B0GTQ4 84 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 NDUFS5O43920 106 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 TCL1BO95988 128 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 COX7BP24311 80 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 AKR1D1P51857 326 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 DSCR10P59022 87 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 ELOF1P60002 83 aaKnown RBP1.76□□□□□ -2.13
USP46-205ENST00000504078 C18orf32Q8TCD1 76 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 HIST1H4GQ99525 98 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 PMCHL2Q9BQD1 86 aa1.76□□□□□ -2.13
USP46-205ENST00000504078 IGHV6-1A0A0B4J1U7 121 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 TEX49A0A1B0GTD5 131 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 LINC01549A6NIU2 74 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 KRTAP16-1A8MUX0 517 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 HRES1P13985 223 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 HINT1P49773 126 aaPredicted RBP1.75□□□□□ -2.13
USP46-205ENST00000504078 LCE3CQ5T5A8 94 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 ADAMTSL4-AS1Q5T5F5 129 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 Q5XG85 94 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 NOTCH2NLQ7Z3S9 236 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 IFI27L1Q96BM0 104 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 DHRS4-AS1Q9P1J3 65 aa1.75□□□□□ -2.13
USP46-205ENST00000504078 LOC107984156A0A0G2JMH3 177 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 J3QQQ9 107 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 LEPROTO15243 131 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 DLEU1O43261 78 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 NDUFC2O95298 119 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 RHEBQ15382 184 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 ARL17AQ8IVW1 177 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 SEC11CQ9BY50 192 aa1.74□□□□□ -2.13
USP46-205ENST00000504078 TRAV12-1A0A0B4J245 112 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 A0A0J9YXY3 114 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 TRBV7-7A0A0K0K1E9 115 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 A8MUU9 505 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 F8WEM9 126 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 PSPHP1O15172 72 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 S100PP25815 95 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 CXCL6P80162 114 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 C12orf57Q99622 126 aa1.73□□□□□ -2.13
USP46-205ENST00000504078 IGLV5-48A0A075B6I7 105 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 A6NN06 94 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 H3BUT2 72 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 LINC00313P59037 77 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 HERVK_113P61574 105 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 LINC00308Q8TCZ7 52 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 CLEC2BQ92478 149 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 VPS25Q9BRG1 176 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 TTTY13Q9BZ97 58 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 TRAPPC1Q9Y5R8 145 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
USP46-205ENST00000504078 LST1O00453 97 aa1.71□□□□□ -2.14
USP46-205ENST00000504078 SERF1AO75920 110 aa1.71□□□□□ -2.14
USP46-205ENST00000504078 PSMB2P49721 201 aa1.71□□□□□ -2.14
USP46-205ENST00000504078 MP68P56378 58 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms