RNA–Protein interactions for RNA: ENST00000503962.1

SEMA6A-206, Transcript of semaphorin 6A, humanhuman

TSL 4

Gene SEMA6A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-206ENST00000503962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.74□□□□□ -2.131e-6■■■■□ 25.3
SEMA6A-206ENST00000503962 ZGRF1Q86YA3 2104 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 ACACAQ13085 2346 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 CSPG4Q6UVK1 2322 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 A0A087WVE0 104 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 A0A1W2PNN7 141 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 FDCSPQ8NFU4 85 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 LINC00846Q9NV44 126 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 SPTBN1Q01082 2364 aaKnown RBP1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 ICE1Q9Y2F5 2266 aa1.73□□□□□ -2.13
SEMA6A-206ENST00000503962 ATMQ13315 3056 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 NBASA2RRP1 2371 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 TRGV4A0A0C4DH28 118 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 IGKV3D-7A0A0C4DH55 119 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 IGKV3OR2-268A0A0C4DH90 116 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 TRBV7-4A0A0J9YYF1 115 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 H0Y9P7 68 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 PIN1P1O15428 100 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 OTOGQ6ZRI0 2925 aa1.72□□□□□ -2.13
SEMA6A-206ENST00000503962 URB1O60287 2271 aaKnown RBP1.71□□□□□ -2.13
SEMA6A-206ENST00000503962 LAMA1P25391 3075 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 MGAQ8IWI9 3026 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 IGKV2-29A2NJV5 120 aaPredicted RBP1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 LINC01549A6NIU2 74 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 FXYD3Q14802 87 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 PRR9Q5T870 116 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 TTTY12Q9BZ98 90 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 CSMD2Q7Z408 3487 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 BSNQ9UPA5 3926 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 CADP27708 2225 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 PLCE1Q9P212 2302 aa1.71□□□□□ -2.14
SEMA6A-206ENST00000503962 HEATR1Q9H583 2144 aaKnown RBP1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 CUBNO60494 3623 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 WNK1Q9H4A3 2382 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 MGAM2Q2M2H8 2515 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 TRAV1-2A0A0B4J238 106 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 FCER1GP30273 86 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 RPS27P42677 84 aaKnown RBP1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 FXYD4P59646 89 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 HERC1Q15751 4861 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 TPRXLQ17RH7 258 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 HCP5Q6MZN7 132 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 COA5Q86WW8 74 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 LINC00208Q96KT6 92 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 TTTY10Q9BZA0 68 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 COL6A6A6NMZ7 2263 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 MUC2Q02817 5179 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 DOCK11Q5JSL3 2073 aa1.7□□□□□ -2.14
SEMA6A-206ENST00000503962 ARFGEF3Q5TH69 2177 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 ABCA13Q86UQ4 5058 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 AKAP9Q99996 3911 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 LOC110117498A0A087WWA1 95 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 TRBV30A0A0K0K1B3 111 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 INE1O15225 51 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 CAV3P56539 151 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 NREPQ16612 68 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 WFDC9Q8NEX5 89 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 SPACA4Q8TDM5 124 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 TXNDC17Q9BRA2 123 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 UBL5Q9BZL1 73 aa1.69□□□□□ -2.14
SEMA6A-206ENST00000503962 DCHS2Q6V1P9 2916 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 NBDYA0A0U1RRE5 68 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 M0R2N4 97 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 ACYP2P14621 99 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 ZNF137PP52743 207 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 DEFB109BQ30KR1 87 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 C10orf113Q5VZT2 155 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 C5orf56Q8N8D9 126 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 NMES1Q9C002 83 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 TENM1Q9UKZ4 2725 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 VPS13CQ709C8 3753 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 ACANP16112 2415 aa1.68□□□□□ -2.14
SEMA6A-206ENST00000503962 TRGV2A0A075B6R0 118 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 TRGV1A0A0A0MS02 117 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 TRAV21A0A0B4J279 112 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 SERF2P84101 59 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 Q6ZQY7 126 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 GAFA1Q96PS6 74 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 ABRACLQ9P1F3 81 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 ARHGAP32A7KAX9 2087 aa1.67□□□□□ -2.14
SEMA6A-206ENST00000503962 PKDREJQ9NTG1 2253 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 USF3Q68DE3 2245 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 ROS1P08922 2347 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 APCP25054 2843 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 A0A087WTM6 91 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 TRBV6-1A0A0K0K1D8 114 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 H3BSH0 61 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 IGKV4-1P06312 121 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 DEFB112Q30KQ8 113 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 GDF5OSQ5U4N7 250 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 LINC00304Q8N9R0 145 aa1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 PRRC2CQ9Y520 2896 aaKnown RBP1.66□□□□□ -2.14
SEMA6A-206ENST00000503962 ABCA4P78363 2273 aa1.65□□□□□ -2.14
SEMA6A-206ENST00000503962 MRPL33O75394 65 aaKnown RBP1.65□□□□□ -2.15
SEMA6A-206ENST00000503962 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
SEMA6A-206ENST00000503962 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms