RNA–Protein interactions for RNA: ENST00000503962.1

SEMA6A-206, Transcript of semaphorin 6A, humanhuman

TSL 4

Gene SEMA6A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-206ENST00000503962 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
SEMA6A-206ENST00000503962 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
SEMA6A-206ENST00000503962 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
SEMA6A-206ENST00000503962 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
SEMA6A-206ENST00000503962 FOXD1Q16676 465 aa17.89■□□□□ 0.45
SEMA6A-206ENST00000503962 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
SEMA6A-206ENST00000503962 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
SEMA6A-206ENST00000503962 ADRA2BP18089 450 aa16.97■□□□□ 0.31
SEMA6A-206ENST00000503962 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
SEMA6A-206ENST00000503962 MSH5O43196 834 aa16.63■□□□□ 0.25
SEMA6A-206ENST00000503962 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
SEMA6A-206ENST00000503962 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
SEMA6A-206ENST00000503962 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
SEMA6A-206ENST00000503962 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
SEMA6A-206ENST00000503962 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
SEMA6A-206ENST00000503962 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
SEMA6A-206ENST00000503962 KCNA4P22459 653 aa14.97□□□□□ -0.01
SEMA6A-206ENST00000503962 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
SEMA6A-206ENST00000503962 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
SEMA6A-206ENST00000503962 HOXD11P31277 338 aaPredicted RBP14.83□□□□□ -0.04
SEMA6A-206ENST00000503962 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
SEMA6A-206ENST00000503962 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
SEMA6A-206ENST00000503962 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
SEMA6A-206ENST00000503962 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
SEMA6A-206ENST00000503962 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
SEMA6A-206ENST00000503962 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
SEMA6A-206ENST00000503962 SLC4A2P04920 1241 aa14.1□□□□□ -0.15
SEMA6A-206ENST00000503962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
SEMA6A-206ENST00000503962 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
SEMA6A-206ENST00000503962 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
SEMA6A-206ENST00000503962 ZBTB22O15209 634 aa13.85□□□□□ -0.19
SEMA6A-206ENST00000503962 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
SEMA6A-206ENST00000503962 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-206ENST00000503962 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
SEMA6A-206ENST00000503962 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
SEMA6A-206ENST00000503962 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
SEMA6A-206ENST00000503962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
SEMA6A-206ENST00000503962 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
SEMA6A-206ENST00000503962 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
SEMA6A-206ENST00000503962 CAPN15O75808 1086 aa13.46□□□□□ -0.25
SEMA6A-206ENST00000503962 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
SEMA6A-206ENST00000503962 DSG3P32926 999 aa13.38□□□□□ -0.27
SEMA6A-206ENST00000503962 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
SEMA6A-206ENST00000503962 APLP2Q06481 763 aa13.34□□□□□ -0.27
SEMA6A-206ENST00000503962 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
SEMA6A-206ENST00000503962 ABCB7O75027 752 aa13.27□□□□□ -0.29
SEMA6A-206ENST00000503962 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
SEMA6A-206ENST00000503962 POLA2Q14181 598 aa13.12□□□□□ -0.31
SEMA6A-206ENST00000503962 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
SEMA6A-206ENST00000503962 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
SEMA6A-206ENST00000503962 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
SEMA6A-206ENST00000503962 FBLN2P98095 1184 aa12.67□□□□□ -0.38
SEMA6A-206ENST00000503962 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
SEMA6A-206ENST00000503962 POTEHQ6S545 545 aa12.66□□□□□ -0.38
SEMA6A-206ENST00000503962 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
SEMA6A-206ENST00000503962 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
SEMA6A-206ENST00000503962 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
SEMA6A-206ENST00000503962 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
SEMA6A-206ENST00000503962 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
SEMA6A-206ENST00000503962 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
SEMA6A-206ENST00000503962 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
SEMA6A-206ENST00000503962 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
SEMA6A-206ENST00000503962 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
SEMA6A-206ENST00000503962 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
SEMA6A-206ENST00000503962 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
SEMA6A-206ENST00000503962 FKBP8Q14318 412 aa12.2□□□□□ -0.46
SEMA6A-206ENST00000503962 PROM2Q8N271 834 aa12.17□□□□□ -0.46
SEMA6A-206ENST00000503962 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
SEMA6A-206ENST00000503962 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
SEMA6A-206ENST00000503962 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
SEMA6A-206ENST00000503962 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEMA6A-206ENST00000503962 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
SEMA6A-206ENST00000503962 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
SEMA6A-206ENST00000503962 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
SEMA6A-206ENST00000503962 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
SEMA6A-206ENST00000503962 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
SEMA6A-206ENST00000503962 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
SEMA6A-206ENST00000503962 HAX1O00165 279 aa11.85□□□□□ -0.51
SEMA6A-206ENST00000503962 EVX2Q03828 476 aa11.83□□□□□ -0.52
SEMA6A-206ENST00000503962 MNX1P50219 401 aaPredicted RBP11.76□□□□□ -0.53
SEMA6A-206ENST00000503962 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
SEMA6A-206ENST00000503962 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
SEMA6A-206ENST00000503962 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
SEMA6A-206ENST00000503962 MIER1Q8N108 512 aa11.66□□□□□ -0.54
SEMA6A-206ENST00000503962 VASPP50552 380 aaPredicted RBP11.65□□□□□ -0.54
SEMA6A-206ENST00000503962 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
SEMA6A-206ENST00000503962 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
SEMA6A-206ENST00000503962 IFNLR1Q8IU57 520 aaPredicted RBP11.52□□□□□ -0.57
SEMA6A-206ENST00000503962 GABBR2O75899 941 aa11.51□□□□□ -0.57
SEMA6A-206ENST00000503962 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
SEMA6A-206ENST00000503962 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
SEMA6A-206ENST00000503962 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
SEMA6A-206ENST00000503962 NUBP1P53384 320 aa11.48□□□□□ -0.57
SEMA6A-206ENST00000503962 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
SEMA6A-206ENST00000503962 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
SEMA6A-206ENST00000503962 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
SEMA6A-206ENST00000503962 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
SEMA6A-206ENST00000503962 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
SEMA6A-206ENST00000503962 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
SEMA6A-206ENST00000503962 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms