RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 C4orf48Q5BLP8 95 aa6.47□□□□□ -1.37
VCAN-205ENST00000503923 Q8N377 158 aa6.47□□□□□ -1.37
VCAN-205ENST00000503923 A0A1B0GX51 115 aa6.46□□□□□ -1.38
VCAN-205ENST00000503923 SMIM29Q86T20 159 aa6.46□□□□□ -1.38
VCAN-205ENST00000503923 FAM218AQ96MZ4 157 aa6.46□□□□□ -1.38
VCAN-205ENST00000503923 PPDPFLQ8WWR9 84 aa6.45□□□□□ -1.38
VCAN-205ENST00000503923 OCIAD2Q56VL3 154 aa6.44□□□□□ -1.38
VCAN-205ENST00000503923 F8WEM9 126 aa6.42□□□□□ -1.38
VCAN-205ENST00000503923 SPINK1P00995 79 aa6.42□□□□□ -1.38
VCAN-205ENST00000503923 GHRHP01286 108 aa6.42□□□□□ -1.38
VCAN-205ENST00000503923 SCGB1C2P0DMR2 95 aa6.42□□□□□ -1.38
VCAN-205ENST00000503923 BATFQ16520 125 aa6.42□□□□□ -1.38
VCAN-205ENST00000503923 CLEC2BQ92478 149 aa6.42□□□□□ -1.38
VCAN-205ENST00000503923 DNAL4O96015 105 aa6.41□□□□□ -1.38
VCAN-205ENST00000503923 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.38
VCAN-205ENST00000503923 SNHG12Q9BXW3 62 aa6.4□□□□□ -1.38
VCAN-205ENST00000503923 H3BQ85 93 aa6.38□□□□□ -1.39
VCAN-205ENST00000503923 TRACP01848 142 aa6.38□□□□□ -1.39
VCAN-205ENST00000503923 IGLV8-61A0A075B6I0 122 aa6.37□□□□□ -1.39
VCAN-205ENST00000503923 LST1O00453 97 aa6.37□□□□□ -1.39
VCAN-205ENST00000503923 CD164Q04900 197 aa6.37□□□□□ -1.39
VCAN-205ENST00000503923 PRR4Q16378 134 aa6.37□□□□□ -1.39
VCAN-205ENST00000503923 Q6JHZ5 121 aa6.37□□□□□ -1.39
VCAN-205ENST00000503923 ORMDL1Q9P0S3 153 aa6.37□□□□□ -1.39
VCAN-205ENST00000503923 FABP2P12104 132 aa6.36□□□□□ -1.39
VCAN-205ENST00000503923 HRCT1Q6UXD1 115 aa6.36□□□□□ -1.39
VCAN-205ENST00000503923 NAA38Q9BRA0 125 aaKnown RBP6.36□□□□□ -1.39
VCAN-205ENST00000503923 NDUFV3P56181 108 aaKnown RBP6.35□□□□□ -1.39
VCAN-205ENST00000503923 LYRM7Q5U5X0 104 aa6.35□□□□□ -1.39
VCAN-205ENST00000503923 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
VCAN-205ENST00000503923 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
VCAN-205ENST00000503923 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
VCAN-205ENST00000503923 TMEM256-PLSCR3K7ERE1 68 aa6.34□□□□□ -1.39
VCAN-205ENST00000503923 ATXN8Q156A1 80 aa6.34□□□□□ -1.39
VCAN-205ENST00000503923 C9orf118A6NHY6 69 aa6.33□□□□□ -1.4
VCAN-205ENST00000503923 H3BUT2 72 aa6.33□□□□□ -1.4
VCAN-205ENST00000503923 TCL1BO95988 128 aa6.33□□□□□ -1.4
VCAN-205ENST00000503923 IGFL1Q6UW32 110 aa6.33□□□□□ -1.4
VCAN-205ENST00000503923 TAX1BP3O14907 124 aa6.32□□□□□ -1.4
VCAN-205ENST00000503923 FP248Q71RG6 208 aaPredicted RBP6.32□□□□□ -1.4
VCAN-205ENST00000503923 LRP2P98164 4655 aa6.31□□□□□ -1.4
VCAN-205ENST00000503923 TRBV20-1A0A075B6N2 111 aa6.31□□□□□ -1.4
VCAN-205ENST00000503923 H3BMG7 143 aa6.31□□□□□ -1.4
VCAN-205ENST00000503923 LCE2BO14633 110 aa6.31□□□□□ -1.4
VCAN-205ENST00000503923 UBE2V1Q13404 147 aa6.3□□□□□ -1.4
VCAN-205ENST00000503923 Q5XG85 94 aa6.3□□□□□ -1.4
VCAN-205ENST00000503923 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
VCAN-205ENST00000503923 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
VCAN-205ENST00000503923 COL5A1-AS1Q5SY13 56 aa6.29□□□□□ -1.4
VCAN-205ENST00000503923 LPAP08519 4548 aa6.28□□□□□ -1.4
VCAN-205ENST00000503923 TRBV7-7A0A0K0K1E9 115 aa6.28□□□□□ -1.4
VCAN-205ENST00000503923 A0A1W2PPM0 123 aa6.28□□□□□ -1.4
VCAN-205ENST00000503923 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
VCAN-205ENST00000503923 Q6Q795 121 aa6.27□□□□□ -1.41
VCAN-205ENST00000503923 ANKRD29Q8N6D5 301 aa6.27□□□□□ -1.41
VCAN-205ENST00000503923 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
VCAN-205ENST00000503923 A0A1B0GV72 72 aa6.25□□□□□ -1.41
VCAN-205ENST00000503923 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
VCAN-205ENST00000503923 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
VCAN-205ENST00000503923 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
VCAN-205ENST00000503923 C9JAW5 83 aa6.23□□□□□ -1.41
VCAN-205ENST00000503923 ASB16-AS1Q495Z4 193 aa6.23□□□□□ -1.41
VCAN-205ENST00000503923 A0A1W2PNM2 257 aa6.22□□□□□ -1.41
VCAN-205ENST00000503923 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
VCAN-205ENST00000503923 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
VCAN-205ENST00000503923 SS18L2Q9UHA2 77 aa6.22□□□□□ -1.41
VCAN-205ENST00000503923 SPCS1Q9Y6A9 102 aa6.22□□□□□ -1.41
VCAN-205ENST00000503923 TRBV7-4A0A0J9YYF1 115 aa6.21□□□□□ -1.42
VCAN-205ENST00000503923 JMJD7-PLA2G4BH0Y9G9 81 aa6.21□□□□□ -1.42
VCAN-205ENST00000503923 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
VCAN-205ENST00000503923 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
VCAN-205ENST00000503923 A0A087WSZ3 146 aa6.2□□□□□ -1.42
VCAN-205ENST00000503923 H3BT86 120 aa6.2□□□□□ -1.42
VCAN-205ENST00000503923 CCKP06307 115 aa6.2□□□□□ -1.42
VCAN-205ENST00000503923 VPS25Q9BRG1 176 aa6.17□□□□□ -1.42
VCAN-205ENST00000503923 K7EP34 96 aa6.16□□□□□ -1.42
VCAN-205ENST00000503923 PDE6GP18545 87 aa6.16□□□□□ -1.42
VCAN-205ENST00000503923 MTURNQ8N3F0 131 aa6.16□□□□□ -1.42
VCAN-205ENST00000503923 OBSCN-AS1Q96MR7 158 aa6.16□□□□□ -1.42
VCAN-205ENST00000503923 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
VCAN-205ENST00000503923 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
VCAN-205ENST00000503923 Q6ZQT0 140 aa6.14□□□□□ -1.43
VCAN-205ENST00000503923 C14orf132Q9NPU4 83 aa6.14□□□□□ -1.43
VCAN-205ENST00000503923 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
VCAN-205ENST00000503923 RNF213Q63HN8 5207 aa6.12□□□□□ -1.43
VCAN-205ENST00000503923 A0A1B0GW54 56 aa6.12□□□□□ -1.43
VCAN-205ENST00000503923 C9orf92A6NGG3 77 aa6.12□□□□□ -1.43
VCAN-205ENST00000503923 Q96NJ1 140 aa6.12□□□□□ -1.43
VCAN-205ENST00000503923 XP32Q5T750 250 aa6.11□□□□□ -1.43
VCAN-205ENST00000503923 MUC17Q685J3 4493 aa6.11□□□□□ -1.43
VCAN-205ENST00000503923 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
VCAN-205ENST00000503923 PRO0461Q9UI25 63 aa6.1□□□□□ -1.43
VCAN-205ENST00000503923 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.43
VCAN-205ENST00000503923 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
VCAN-205ENST00000503923 SIGMAR1Q99720 223 aa6.08□□□□□ -1.44
VCAN-205ENST00000503923 F8W1H4 67 aa6.06□□□□□ -1.44
VCAN-205ENST00000503923 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
VCAN-205ENST00000503923 DEFB116Q30KQ4 102 aa6.05□□□□□ -1.44
VCAN-205ENST00000503923 J3KT08 172 aa6.04□□□□□ -1.44
VCAN-205ENST00000503923 NREPQ16612 68 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms