RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 LCA10Q71F78 164 aa10.11□□□□□ -0.79
HMGXB3-202ENST00000503427 Q8NDZ9 215 aa10.11□□□□□ -0.79
HMGXB3-202ENST00000503427 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
HMGXB3-202ENST00000503427 IGLV7-46A0A075B6I9 117 aa10.09□□□□□ -0.79
HMGXB3-202ENST00000503427 SPRR1AP35321 89 aa10.08□□□□□ -0.8
HMGXB3-202ENST00000503427 NOTCH1P46531 2555 aa10.08□□□□□ -0.8
HMGXB3-202ENST00000503427 PRR26Q8N8Z3 221 aa10.07□□□□□ -0.8
HMGXB3-202ENST00000503427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-202ENST00000503427 Q8N1X5 172 aa10.06□□□□□ -0.8
HMGXB3-202ENST00000503427 SZT2Q5T011 3432 aa10.03□□□□□ -0.8
HMGXB3-202ENST00000503427 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
HMGXB3-202ENST00000503427 MAP1AP78559 2803 aaPredicted RBP10.02□□□□□ -0.8
HMGXB3-202ENST00000503427 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
HMGXB3-202ENST00000503427 PLAC8Q9NZF1 115 aa10□□□□□ -0.81
HMGXB3-202ENST00000503427 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
HMGXB3-202ENST00000503427 Q5XG85 94 aa9.98□□□□□ -0.81
HMGXB3-202ENST00000503427 Q75L30 129 aa9.98□□□□□ -0.81
HMGXB3-202ENST00000503427 COX6B2Q6YFQ2 88 aa9.98□□□□□ -0.81
HMGXB3-202ENST00000503427 HRES1P13985 223 aa9.97□□□□□ -0.81
HMGXB3-202ENST00000503427 FAM229BQ4G0N7 80 aa9.97□□□□□ -0.81
HMGXB3-202ENST00000503427 SPRR1BP22528 89 aa9.96□□□□□ -0.82
HMGXB3-202ENST00000503427 VPS13AQ96RL7 3174 aa9.96□□□□□ -0.82
HMGXB3-202ENST00000503427 RBM12B-AS1Q9P1G2 102 aa9.96□□□□□ -0.82
HMGXB3-202ENST00000503427 REV3LO60673 3130 aa9.94□□□□□ -0.82
HMGXB3-202ENST00000503427 COL6A3P12111 3177 aa9.94□□□□□ -0.82
HMGXB3-202ENST00000503427 FP248Q71RG6 208 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-202ENST00000503427 Q8N9P0 234 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-202ENST00000503427 KRTAP26-1Q6PEX3 210 aa9.93□□□□□ -0.82
HMGXB3-202ENST00000503427 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
HMGXB3-202ENST00000503427 UBR5O95071 2799 aaPredicted RBP9.92□□□□□ -0.82
HMGXB3-202ENST00000503427 LINC00472Q9H8W2 130 aa9.92□□□□□ -0.82
HMGXB3-202ENST00000503427 FLNCQ14315 2725 aa9.9□□□□□ -0.82
HMGXB3-202ENST00000503427 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-202ENST00000503427 KRTAP1-5Q9BYS1 174 aa9.9□□□□□ -0.82
HMGXB3-202ENST00000503427 A0A0D9SG42 100 aa9.9□□□□□ -0.83
HMGXB3-202ENST00000503427 FRYLO94915 3013 aa9.84□□□□□ -0.83
HMGXB3-202ENST00000503427 A0A1B0GU33 70 aa9.84□□□□□ -0.83
HMGXB3-202ENST00000503427 FRYQ5TBA9 3013 aa9.84□□□□□ -0.83
HMGXB3-202ENST00000503427 LCE6AA0A183 80 aa9.81□□□□□ -0.84
HMGXB3-202ENST00000503427 ZCCHC13Q8WW36 166 aaKnown RBP9.81□□□□□ -0.84
HMGXB3-202ENST00000503427 LINC01554Q52M75 96 aa9.8□□□□□ -0.84
HMGXB3-202ENST00000503427 Q5VV11 94 aa9.79□□□□□ -0.84
HMGXB3-202ENST00000503427 ITPR2Q14571 2701 aa9.78□□□□□ -0.84
HMGXB3-202ENST00000503427 Q5W150 140 aa9.78□□□□□ -0.84
HMGXB3-202ENST00000503427 KRTAP21-3Q3LHN1 58 aa9.77□□□□□ -0.84
HMGXB3-202ENST00000503427 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
HMGXB3-202ENST00000503427 OXTP01178 125 aa9.74□□□□□ -0.85
HMGXB3-202ENST00000503427 NSD1Q96L73 2696 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-202ENST00000503427 ITPR1Q14643 2758 aa9.74□□□□□ -0.85
HMGXB3-202ENST00000503427 HIVEP1P15822 2718 aa9.74□□□□□ -0.85
HMGXB3-202ENST00000503427 Q6ZSA8 131 aa9.73□□□□□ -0.85
HMGXB3-202ENST00000503427 COL12A1Q99715 3063 aa9.72□□□□□ -0.85
HMGXB3-202ENST00000503427 KRTAP4-16G5E9R7 235 aaPredicted RBP9.71□□□□□ -0.85
HMGXB3-202ENST00000503427 TACC2O95359 2948 aa9.7□□□□□ -0.86
HMGXB3-202ENST00000503427 ATMQ13315 3056 aa9.7□□□□□ -0.86
HMGXB3-202ENST00000503427 LAMA1P25391 3075 aa9.69□□□□□ -0.86
HMGXB3-202ENST00000503427 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
HMGXB3-202ENST00000503427 VCANP13611 3396 aa9.69□□□□□ -0.86
HMGXB3-202ENST00000503427 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
HMGXB3-202ENST00000503427 DMXL2Q8TDJ6 3036 aa9.68□□□□□ -0.86
HMGXB3-202ENST00000503427 Q6ZR54 194 aa9.67□□□□□ -0.86
HMGXB3-202ENST00000503427 SPINK7P58062 85 aa9.67□□□□□ -0.86
HMGXB3-202ENST00000503427 DMAC1Q96GE9 116 aa9.67□□□□□ -0.86
HMGXB3-202ENST00000503427 KRTAP10-1P60331 282 aa9.66□□□□□ -0.86
HMGXB3-202ENST00000503427 LINC00483Q53H64 154 aa9.66□□□□□ -0.86
HMGXB3-202ENST00000503427 KRTAP10-2P60368 255 aa9.65□□□□□ -0.87
HMGXB3-202ENST00000503427 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
HMGXB3-202ENST00000503427 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
HMGXB3-202ENST00000503427 KMT2BQ9UMN6 2715 aaPredicted RBP9.59□□□□□ -0.87
HMGXB3-202ENST00000503427 CSAG1Q6PB30 78 aa9.59□□□□□ -0.87
HMGXB3-202ENST00000503427 LUZP6Q538Z0 58 aa9.58□□□□□ -0.88
HMGXB3-202ENST00000503427 CELSR3Q9NYQ7 3312 aa9.58□□□□□ -0.88
HMGXB3-202ENST00000503427 S4R3F8 94 aa9.57□□□□□ -0.88
HMGXB3-202ENST00000503427 PANO1I0J062 215 aa9.56□□□□□ -0.88
HMGXB3-202ENST00000503427 UTP20O75691 2785 aaKnown RBP9.56□□□□□ -0.88
HMGXB3-202ENST00000503427 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
HMGXB3-202ENST00000503427 Q5VSD8 79 aa9.55□□□□□ -0.88
HMGXB3-202ENST00000503427 ADGRG4Q8IZF6 3080 aa9.55□□□□□ -0.88
HMGXB3-202ENST00000503427 KALRNO60229 2985 aa9.53□□□□□ -0.88
HMGXB3-202ENST00000503427 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
HMGXB3-202ENST00000503427 BOD1L1Q8NFC6 3051 aa9.51□□□□□ -0.89
HMGXB3-202ENST00000503427 CRYBG3Q68DQ2 2970 aa9.51□□□□□ -0.89
HMGXB3-202ENST00000503427 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
HMGXB3-202ENST00000503427 NBEAQ8NFP9 2946 aa9.48□□□□□ -0.89
HMGXB3-202ENST00000503427 LRBAP50851 2863 aa9.47□□□□□ -0.89
HMGXB3-202ENST00000503427 APCP25054 2843 aa9.47□□□□□ -0.89
HMGXB3-202ENST00000503427 DMXL1Q9Y485 3027 aa9.44□□□□□ -0.9
HMGXB3-202ENST00000503427 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-202ENST00000503427 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
HMGXB3-202ENST00000503427 ZZEF1O43149 2961 aa9.4□□□□□ -0.9
HMGXB3-202ENST00000503427 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
HMGXB3-202ENST00000503427 H1FX-AS1Q4G0G2 97 aa9.4□□□□□ -0.91
HMGXB3-202ENST00000503427 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.91
HMGXB3-202ENST00000503427 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
HMGXB3-202ENST00000503427 DNAH14Q0VDD8 3507 aa9.39□□□□□ -0.91
HMGXB3-202ENST00000503427 R4GN34 69 aa9.38□□□□□ -0.91
HMGXB3-202ENST00000503427 FLG2Q5D862 2391 aaPredicted RBP9.38□□□□□ -0.91
HMGXB3-202ENST00000503427 A0A087X002 238 aa9.37□□□□□ -0.91
HMGXB3-202ENST00000503427 FREM2Q5SZK8 3169 aa9.36□□□□□ -0.91
HMGXB3-202ENST00000503427 ROMO1P60602 79 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms