RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 A0A1B0GUT8 65 aa-1.9□□□□□ -2.71
SMAD1-203ENST00000502342 C20orf202A1L168 122 aa-1.9□□□□□ -2.71
SMAD1-203ENST00000502342 IQCF6A8MYZ5 107 aa-1.9□□□□□ -2.71
SMAD1-203ENST00000502342 H0YAA0 97 aa-1.9□□□□□ -2.71
SMAD1-203ENST00000502342 RELNP78509 3460 aa-1.9□□□□□ -2.71
SMAD1-203ENST00000502342 SUPT6HQ7KZ85 1726 aaKnown RBP-1.91□□□□□ -2.71
SMAD1-203ENST00000502342 FRYQ5TBA9 3013 aa-1.91□□□□□ -2.72
SMAD1-203ENST00000502342 FAUP35544 74 aaKnown RBP-1.91□□□□□ -2.72
SMAD1-203ENST00000502342 TLN2Q9Y4G6 2542 aa-1.92□□□□□ -2.72
SMAD1-203ENST00000502342 FYCO1Q9BQS8 1478 aa-1.92□□□□□ -2.72
SMAD1-203ENST00000502342 NESP48681 1621 aa-1.93□□□□□ -2.72
SMAD1-203ENST00000502342 C5orf42Q9H799 3197 aa-1.93□□□□□ -2.72
SMAD1-203ENST00000502342 RANBP2P49792 3224 aaKnown RBP-1.93□□□□□ -2.72
SMAD1-203ENST00000502342 CYB5AP00167 134 aa-1.94□□□□□ -2.72
SMAD1-203ENST00000502342 PLGLAQ15195 96 aa-1.94□□□□□ -2.72
SMAD1-203ENST00000502342 EYSQ5T1H1 3165 aa-1.94□□□□□ -2.72
SMAD1-203ENST00000502342 EPRSP07814 1512 aaKnown RBP-1.95□□□□□ -2.72
SMAD1-203ENST00000502342 LINC00587B1AMM8 73 aa-1.95□□□□□ -2.72
SMAD1-203ENST00000502342 S100A10P60903 97 aa-1.95□□□□□ -2.72
SMAD1-203ENST00000502342 ATP7BP35670 1465 aa-1.95□□□□□ -2.72
SMAD1-203ENST00000502342 POLR1AO95602 1720 aaPredicted RBP-1.96□□□□□ -2.72
SMAD1-203ENST00000502342 NWD1Q149M9 1564 aa-1.96□□□□□ -2.72
SMAD1-203ENST00000502342 WFDC9Q8NEX5 89 aa-1.96□□□□□ -2.72
SMAD1-203ENST00000502342 MAGI3Q5TCQ9 1506 aa-1.96□□□□□ -2.72
SMAD1-203ENST00000502342 DEPDC5O75140 1603 aa-1.97□□□□□ -2.72
SMAD1-203ENST00000502342 LINC00032P0C843 101 aa-1.97□□□□□ -2.72
SMAD1-203ENST00000502342 KRTAP19-5Q3LI72 72 aa-1.97□□□□□ -2.72
SMAD1-203ENST00000502342 WIZO95785 1651 aa-1.97□□□□□ -2.73
SMAD1-203ENST00000502342 SRCAPQ6ZRS2 3230 aa-1.97□□□□□ -2.73
SMAD1-203ENST00000502342 FANCAO15360 1455 aa-1.98□□□□□ -2.73
SMAD1-203ENST00000502342 LTN1O94822 1766 aa-1.98□□□□□ -2.73
SMAD1-203ENST00000502342 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.98□□□□□ -2.73
SMAD1-203ENST00000502342 SMG1Q96Q15 3661 aaKnown RBP-1.98□□□□□ -2.73
SMAD1-203ENST00000502342 ITPR2Q14571 2701 aa-1.99□□□□□ -2.73
SMAD1-203ENST00000502342 TRAV21A0A0B4J279 112 aa-1.99□□□□□ -2.73
SMAD1-203ENST00000502342 HMGN2P05204 90 aaKnown RBP-1.99□□□□□ -2.73
SMAD1-203ENST00000502342 DEFB106AQ8N104 65 aa-1.99□□□□□ -2.73
SMAD1-203ENST00000502342 CSMD1Q96PZ7 3565 aa-2□□□□□ -2.73
SMAD1-203ENST00000502342 KRTAP19-6Q3LI70 58 aa-2□□□□□ -2.73
SMAD1-203ENST00000502342 CHD7Q9P2D1 2997 aa-2□□□□□ -2.73
SMAD1-203ENST00000502342 ATP10BO94823 1461 aa-2.01□□□□□ -2.73
SMAD1-203ENST00000502342 TEX14Q8IWB6 1497 aa-2.01□□□□□ -2.73
SMAD1-203ENST00000502342 SMIM11AP58511 58 aa-2.01□□□□□ -2.73
SMAD1-203ENST00000502342 MT1XP80297 61 aa-2.01□□□□□ -2.73
SMAD1-203ENST00000502342 SARNPP82979 210 aaKnown RBP-2.01□□□□□ -2.73
SMAD1-203ENST00000502342 PEA15Q15121 130 aa-2.02□□□□□ -2.73
SMAD1-203ENST00000502342 CEP295Q9C0D2 2601 aa-2.02□□□□□ -2.73
SMAD1-203ENST00000502342 IFI6P09912 130 aa-2.03□□□□□ -2.73
SMAD1-203ENST00000502342 IAPPP10997 89 aa-2.03□□□□□ -2.73
SMAD1-203ENST00000502342 DPY30Q9C005 99 aa-2.03□□□□□ -2.73
SMAD1-203ENST00000502342 PLIN4Q96Q06 1357 aa-2.03□□□□□ -2.73
SMAD1-203ENST00000502342 DOT1LQ8TEK3 1739 aa-2.03□□□□□ -2.73
SMAD1-203ENST00000502342 MT1BP07438 61 aa-2.04□□□□□ -2.74
SMAD1-203ENST00000502342 DEFB130BP0DP73 79 aa-2.04□□□□□ -2.74
SMAD1-203ENST00000502342 DEFB130AP0DP74 79 aa-2.04□□□□□ -2.74
SMAD1-203ENST00000502342 MYO3AQ8NEV4 1616 aa-2.04□□□□□ -2.74
SMAD1-203ENST00000502342 SPENQ96T58 3664 aaKnown RBP-2.05□□□□□ -2.74
SMAD1-203ENST00000502342 LYNX1G3V0Z9 82 aa-2.06□□□□□ -2.74
SMAD1-203ENST00000502342 MYO9AB2RTY4 2548 aa-2.06□□□□□ -2.74
SMAD1-203ENST00000502342 DNAH5Q8TE73 4624 aa-2.06□□□□□ -2.74
SMAD1-203ENST00000502342 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.06□□□□□ -2.74
SMAD1-203ENST00000502342 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.06□□□□□ -2.74
SMAD1-203ENST00000502342 UBR1Q8IWV7 1749 aa-2.07□□□□□ -2.74
SMAD1-203ENST00000502342 ACYP1P07311 99 aa-2.07□□□□□ -2.74
SMAD1-203ENST00000502342 LCE6AA0A183 80 aa-2.08□□□□□ -2.74
SMAD1-203ENST00000502342 NDUFB1O75438 58 aa-2.08□□□□□ -2.74
SMAD1-203ENST00000502342 NEXMIFQ5QGS0 1516 aa-2.08□□□□□ -2.74
SMAD1-203ENST00000502342 BPTFQ12830 3046 aa-2.08□□□□□ -2.74
SMAD1-203ENST00000502342 ANKRD36CQ5JPF3 1778 aa-2.08□□□□□ -2.74
SMAD1-203ENST00000502342 CNTLNQ9NXG0 1405 aa-2.09□□□□□ -2.74
SMAD1-203ENST00000502342 CFAP46Q8IYW2 2715 aa-2.1□□□□□ -2.74
SMAD1-203ENST00000502342 TCEAL7Q9BRU2 100 aa-2.1□□□□□ -2.75
SMAD1-203ENST00000502342 SPTAN1Q13813 2472 aaKnown RBP-2.1□□□□□ -2.75
SMAD1-203ENST00000502342 DDX60LQ5H9U9 1706 aaKnown RBP-2.11□□□□□ -2.75
SMAD1-203ENST00000502342 CLPSL2Q6UWE3 100 aa-2.11□□□□□ -2.75
SMAD1-203ENST00000502342 LRBAP50851 2863 aa-2.12□□□□□ -2.75
SMAD1-203ENST00000502342 DNAH17Q9UFH2 4485 aa-2.12□□□□□ -2.75
SMAD1-203ENST00000502342 MYMXA0A1B0GTQ4 84 aa-2.12□□□□□ -2.75
SMAD1-203ENST00000502342 S100PP25815 95 aa-2.12□□□□□ -2.75
SMAD1-203ENST00000502342 C14orf144Q96I85 54 aa-2.12□□□□□ -2.75
SMAD1-203ENST00000502342 NCOA2Q15596 1464 aa-2.13□□□□□ -2.75
SMAD1-203ENST00000502342 GYPAP02724 150 aa-2.13□□□□□ -2.75
SMAD1-203ENST00000502342 MT1MQ8N339 61 aa-2.13□□□□□ -2.75
SMAD1-203ENST00000502342 RBP2P50120 134 aa-2.14□□□□□ -2.75
SMAD1-203ENST00000502342 DIP2BQ9P265 1576 aa-2.15□□□□□ -2.75
SMAD1-203ENST00000502342 ZNF831Q5JPB2 1677 aa-2.15□□□□□ -2.75
SMAD1-203ENST00000502342 IFI27P40305 119 aaPredicted RBP-2.15□□□□□ -2.75
SMAD1-203ENST00000502342 ACBD7Q8N6N7 88 aa-2.15□□□□□ -2.75
SMAD1-203ENST00000502342 C20orf78Q9BR46 151 aa-2.15□□□□□ -2.75
SMAD1-203ENST00000502342 MYO15AQ9UKN7 3530 aa-2.15□□□□□ -2.75
SMAD1-203ENST00000502342 ABCC10Q5T3U5 1492 aa-2.15□□□□□ -2.75
SMAD1-203ENST00000502342 ATP6V1G2-DDX39BF2Z307 99 aa-2.16□□□□□ -2.76
SMAD1-203ENST00000502342 MT2AP02795 61 aa-2.16□□□□□ -2.76
SMAD1-203ENST00000502342 SMR3BP02814 79 aaPredicted RBP-2.16□□□□□ -2.76
SMAD1-203ENST00000502342 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.16□□□□□ -2.76
SMAD1-203ENST00000502342 CEP162Q5TB80 1403 aa-2.17□□□□□ -2.76
SMAD1-203ENST00000502342 URB2Q14146 1524 aaKnown RBP-2.17□□□□□ -2.76
SMAD1-203ENST00000502342 TMEM131LA2VDJ0 1609 aa-2.17□□□□□ -2.76
SMAD1-203ENST00000502342 ARFGEF2Q9Y6D5 1785 aa-2.17□□□□□ -2.76
SMAD1-203ENST00000502342 NCMAPQ5T1S8 102 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms