RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 RPS27P42677 84 aaKnown RBP1.39□□□□□ -2.19
CALD1-224ENST00000498254 KRTAP21-3Q3LHN1 58 aa1.39□□□□□ -2.19
CALD1-224ENST00000498254 MKI67P46013 3256 aaKnown RBP1.39□□□□□ -2.19
CALD1-224ENST00000498254 ANGP03950 147 aaKnown RBP1.38□□□□□ -2.19
CALD1-224ENST00000498254 RPL39P62891 51 aaKnown RBP1.38□□□□□ -2.19
CALD1-224ENST00000498254 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
CALD1-224ENST00000498254 RPL39LQ96EH5 51 aaKnown RBP1.38□□□□□ -2.19
CALD1-224ENST00000498254 TECTAO75443 2155 aa1.38□□□□□ -2.19
CALD1-224ENST00000498254 FAM208BQ5VWN6 2430 aa1.38□□□□□ -2.19
CALD1-224ENST00000498254 ATRQ13535 2644 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 ALMS1Q8TCU4 4167 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 MUC3AQ02505 3323 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 SPTBN5Q9NRC6 3674 aaKnown RBP1.37□□□□□ -2.19
CALD1-224ENST00000498254 LINC00575Q6W349 94 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 IGSF10Q6WRI0 2623 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 CADP27708 2225 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 NBEAL2Q6ZNJ1 2754 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 REV3LO60673 3130 aa1.37□□□□□ -2.19
CALD1-224ENST00000498254 ABCA1O95477 2261 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 K7EQZ3 153 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 CCL22O00626 93 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 UBR5O95071 2799 aaPredicted RBP1.36□□□□□ -2.19
CALD1-224ENST00000498254 PIGYQ3MUY2 71 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 TENM4Q6N022 2769 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 BOD1L1Q8NFC6 3051 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 LEAP2Q969E1 77 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 TTC28Q96AY4 2481 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 MYO9AB2RTY4 2548 aa1.36□□□□□ -2.19
CALD1-224ENST00000498254 ZDBF2Q9HCK1 2354 aa1.35□□□□□ -2.19
CALD1-224ENST00000498254 POLR2KP53803 58 aaKnown RBP1.35□□□□□ -2.19
CALD1-224ENST00000498254 MINOS1Q5TGZ0 78 aa1.35□□□□□ -2.19
CALD1-224ENST00000498254 UNQ6190/PRO20217Q6UXQ8 127 aa1.35□□□□□ -2.19
CALD1-224ENST00000498254 WFDC13Q8IUB5 93 aa1.35□□□□□ -2.19
CALD1-224ENST00000498254 DNHD1Q96M86 4753 aa1.35□□□□□ -2.19
CALD1-224ENST00000498254 PKD1L1Q8TDX9 2849 aa1.34□□□□□ -2.19
CALD1-224ENST00000498254 CENPFP49454 3210 aa1.34□□□□□ -2.19
CALD1-224ENST00000498254 RYR3Q15413 4870 aa1.34□□□□□ -2.19
CALD1-224ENST00000498254 I3L2K1 104 aa1.34□□□□□ -2.19
CALD1-224ENST00000498254 Q6ZSA8 131 aa1.34□□□□□ -2.19
CALD1-224ENST00000498254 DEFB119Q8N690 84 aa1.34□□□□□ -2.19
CALD1-224ENST00000498254 FBN2P35556 2912 aa1.34□□□□□ -2.2
CALD1-224ENST00000498254 ASPMQ8IZT6 3477 aa1.34□□□□□ -2.2
CALD1-224ENST00000498254 LYNX1P0DP58 116 aa1.33□□□□□ -2.2
CALD1-224ENST00000498254 WFDC10BQ8IUB3 73 aa1.33□□□□□ -2.2
CALD1-224ENST00000498254 C10orf95Q9H7T3 257 aa1.33□□□□□ -2.2
CALD1-224ENST00000498254 C6orf48Q9UBA6 75 aa1.33□□□□□ -2.2
CALD1-224ENST00000498254 CFAP46Q8IYW2 2715 aa1.33□□□□□ -2.2
CALD1-224ENST00000498254 GOLGB1Q14789 3259 aaKnown RBP1.33□□□□□ -2.2
CALD1-224ENST00000498254 C5orf42Q9H799 3197 aa1.33□□□□□ -2.2
CALD1-224ENST00000498254 SPEGQ15772 3267 aa1.32□□□□□ -2.2
CALD1-224ENST00000498254 POLQO75417 2590 aa1.32□□□□□ -2.2
CALD1-224ENST00000498254 H0YAA0 97 aa1.32□□□□□ -2.2
CALD1-224ENST00000498254 LELP1Q5T871 98 aa1.32□□□□□ -2.2
CALD1-224ENST00000498254 C10orf99Q6UWK7 81 aa1.32□□□□□ -2.2
CALD1-224ENST00000498254 UBE2DNLQ8IWF7 75 aa1.32□□□□□ -2.2
CALD1-224ENST00000498254 MRPL34Q9BQ48 92 aaKnown RBP1.32□□□□□ -2.2
CALD1-224ENST00000498254 CEP295Q9C0D2 2601 aa1.32□□□□□ -2.2
CALD1-224ENST00000498254 RELNP78509 3460 aa1.31□□□□□ -2.2
CALD1-224ENST00000498254 URB1O60287 2271 aaKnown RBP1.31□□□□□ -2.2
CALD1-224ENST00000498254 LYNX1G3V0Z9 82 aa1.31□□□□□ -2.2
CALD1-224ENST00000498254 PRCDQ00LT1 54 aa1.31□□□□□ -2.2
CALD1-224ENST00000498254 DEFB104AQ8WTQ1 72 aa1.31□□□□□ -2.2
CALD1-224ENST00000498254 BRCA2P51587 3418 aa1.31□□□□□ -2.2
CALD1-224ENST00000498254 KNTC1P50748 2209 aa1.31□□□□□ -2.2
CALD1-224ENST00000498254 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
CALD1-224ENST00000498254 MUC6Q6W4X9 2439 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 CFAP54Q96N23 3096 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 NBEAL1Q6ZS30 2694 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 ASXL3Q9C0F0 2248 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 ITPR1Q14643 2758 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 KAAG1Q9UBP8 84 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 TPRP12270 2363 aaKnown RBP1.3□□□□□ -2.2
CALD1-224ENST00000498254 SPTAN1Q13813 2472 aaKnown RBP1.3□□□□□ -2.2
CALD1-224ENST00000498254 PDZD2O15018 2839 aa1.3□□□□□ -2.2
CALD1-224ENST00000498254 PCNX1Q96RV3 2341 aa1.29□□□□□ -2.2
CALD1-224ENST00000498254 UTP20O75691 2785 aaKnown RBP1.29□□□□□ -2.2
CALD1-224ENST00000498254 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
CALD1-224ENST00000498254 ZFYVE26Q68DK2 2539 aa1.29□□□□□ -2.2
CALD1-224ENST00000498254 EPPK1P58107 5090 aaKnown RBP1.28□□□□□ -2.2
CALD1-224ENST00000498254 PTPRQQ9UMZ3 2332 aa1.28□□□□□ -2.2
CALD1-224ENST00000498254 GVINP1Q7Z2Y8 2422 aa1.28□□□□□ -2.2
CALD1-224ENST00000498254 HTTP42858 3142 aa1.28□□□□□ -2.2
CALD1-224ENST00000498254 COX6A2Q02221 97 aa1.28□□□□□ -2.2
CALD1-224ENST00000498254 DEFB106AQ8N104 65 aa1.28□□□□□ -2.2
CALD1-224ENST00000498254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.28□□□□□ -2.2
CALD1-224ENST00000498254 CREBBPQ92793 2442 aa1.28□□□□□ -2.2
CALD1-224ENST00000498254 USP34Q70CQ2 3546 aa1.28□□□□□ -2.21
CALD1-224ENST00000498254 BIRC6Q9NR09 4857 aa1.28□□□□□ -2.21
CALD1-224ENST00000498254 EP400Q96L91 3159 aa1.27□□□□□ -2.21
CALD1-224ENST00000498254 COL6A6A6NMZ7 2263 aa1.27□□□□□ -2.21
CALD1-224ENST00000498254 IGLV5-48A0A075B6I7 105 aa1.27□□□□□ -2.21
CALD1-224ENST00000498254 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
CALD1-224ENST00000498254 CSMD1Q96PZ7 3565 aa1.27□□□□□ -2.21
CALD1-224ENST00000498254 NSD1Q96L73 2696 aaPredicted RBP1.27□□□□□ -2.21
CALD1-224ENST00000498254 TEX15Q9BXT5 2789 aa1.26□□□□□ -2.21
CALD1-224ENST00000498254 CNOT1A5YKK6 2376 aaKnown RBP1.26□□□□□ -2.21
CALD1-224ENST00000498254 M0QY20 66 aa1.26□□□□□ -2.21
CALD1-224ENST00000498254 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
CALD1-224ENST00000498254 USMG5Q96IX5 58 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms