RNA–Protein interactions for RNA: ENST00000498044.6

CBWD1-218, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-218ENST00000498044 RGPD5Q99666 1765 aa-1.2□□□□□ -2.6
CBWD1-218ENST00000498044 HSD52Q0P140 79 aa-1.2□□□□□ -2.6
CBWD1-218ENST00000498044 MT1LQ93083 61 aa-1.2□□□□□ -2.6
CBWD1-218ENST00000498044 UBR3Q6ZT12 1888 aa-1.2□□□□□ -2.6
CBWD1-218ENST00000498044 H0Y9P7 68 aa-1.21□□□□□ -2.6
CBWD1-218ENST00000498044 H0YAA0 97 aa-1.21□□□□□ -2.6
CBWD1-218ENST00000498044 CCL22O00626 93 aa-1.21□□□□□ -2.6
CBWD1-218ENST00000498044 NDUFC1O43677 76 aa-1.21□□□□□ -2.6
CBWD1-218ENST00000498044 WFDC13Q8IUB5 93 aa-1.21□□□□□ -2.6
CBWD1-218ENST00000498044 ABCC5O15440 1437 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 ANKRD50Q9ULJ7 1429 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 MYH4Q9Y623 1939 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 A0A0G2JND7 137 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 SMR3BP02814 79 aaPredicted RBP-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 DEFB1P60022 68 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 PSMG4Q5JS54 123 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 CACFD1Q9UGQ2 172 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 CDKN2A-AS1Q9UH64 79 aa-1.22□□□□□ -2.6
CBWD1-218ENST00000498044 MAP3K1Q13233 1512 aa-1.23□□□□□ -2.61
CBWD1-218ENST00000498044 PMCHL1Q16048 86 aa-1.23□□□□□ -2.61
CBWD1-218ENST00000498044 DEFB107AQ8IZN7 70 aa-1.23□□□□□ -2.61
CBWD1-218ENST00000498044 HIGD1BQ9P298 99 aa-1.23□□□□□ -2.61
CBWD1-218ENST00000498044 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.23□□□□□ -2.61
CBWD1-218ENST00000498044 CLIP1P30622 1438 aa-1.23□□□□□ -2.61
CBWD1-218ENST00000498044 ALKQ9UM73 1620 aa-1.24□□□□□ -2.61
CBWD1-218ENST00000498044 GNGT1P63211 74 aa-1.24□□□□□ -2.61
CBWD1-218ENST00000498044 HEPN1Q6WQI6 88 aa-1.24□□□□□ -2.61
CBWD1-218ENST00000498044 SAMD9Q5K651 1589 aa-1.25□□□□□ -2.61
CBWD1-218ENST00000498044 SUPT6HQ7KZ85 1726 aaKnown RBP-1.25□□□□□ -2.61
CBWD1-218ENST00000498044 TRBV25-1A0A075B6N4 114 aa-1.25□□□□□ -2.61
CBWD1-218ENST00000498044 TRAV30A0A087WSZ9 112 aa-1.25□□□□□ -2.61
CBWD1-218ENST00000498044 C20orf202A1L168 122 aa-1.25□□□□□ -2.61
CBWD1-218ENST00000498044 MLH3Q9UHC1 1453 aa-1.27□□□□□ -2.61
CBWD1-218ENST00000498044 RGPD1P0DJD0 1748 aa-1.27□□□□□ -2.61
CBWD1-218ENST00000498044 POLR1AO95602 1720 aaPredicted RBP-1.28□□□□□ -2.61
CBWD1-218ENST00000498044 PLXNC1O60486 1568 aa-1.28□□□□□ -2.61
CBWD1-218ENST00000498044 GNGT2O14610 69 aa-1.28□□□□□ -2.61
CBWD1-218ENST00000498044 KRTAP19-5Q3LI72 72 aa-1.28□□□□□ -2.61
CBWD1-218ENST00000498044 SPTY2D1-AS1A0A0U1RR47 76 aa-1.29□□□□□ -2.62
CBWD1-218ENST00000498044 ARMS2P0C7Q2 107 aa-1.29□□□□□ -2.62
CBWD1-218ENST00000498044 NESP48681 1621 aa-1.29□□□□□ -2.62
CBWD1-218ENST00000498044 LTN1O94822 1766 aa-1.3□□□□□ -2.62
CBWD1-218ENST00000498044 ZFYVE16Q7Z3T8 1539 aa-1.3□□□□□ -2.62
CBWD1-218ENST00000498044 WIZO95785 1651 aa-1.31□□□□□ -2.62
CBWD1-218ENST00000498044 TRBV7-7A0A0K0K1E9 115 aa-1.31□□□□□ -2.62
CBWD1-218ENST00000498044 MPC2O95563 127 aa-1.31□□□□□ -2.62
CBWD1-218ENST00000498044 UQCRHP07919 91 aa-1.31□□□□□ -2.62
CBWD1-218ENST00000498044 USP32Q8NFA0 1604 aa-1.31□□□□□ -2.62
CBWD1-218ENST00000498044 PRDM15P57071 1507 aaPredicted RBP-1.31□□□□□ -2.62
CBWD1-218ENST00000498044 MAGI2Q86UL8 1455 aa-1.31□□□□□ -2.62
CBWD1-218ENST00000498044 COX6B2Q6YFQ2 88 aa-1.32□□□□□ -2.62
CBWD1-218ENST00000498044 TRGV9Q99603 122 aa-1.32□□□□□ -2.62
CBWD1-218ENST00000498044 UBR1Q8IWV7 1749 aa-1.32□□□□□ -2.62
CBWD1-218ENST00000498044 CLTCQ00610 1675 aaKnown RBP-1.32□□□□□ -2.62
CBWD1-218ENST00000498044 ABCC2Q92887 1545 aa-1.33□□□□□ -2.62
CBWD1-218ENST00000498044 H7BZZ5 65 aa-1.33□□□□□ -2.62
CBWD1-218ENST00000498044 NMSQ5H8A3 153 aa-1.33□□□□□ -2.62
CBWD1-218ENST00000498044 LCE6AA0A183 80 aa-1.34□□□□□ -2.62
CBWD1-218ENST00000498044 NDUFA3O95167 84 aa-1.34□□□□□ -2.62
CBWD1-218ENST00000498044 DEFB110Q30KQ9 67 aa-1.34□□□□□ -2.62
CBWD1-218ENST00000498044 S4R3F8 94 aa-1.34□□□□□ -2.62
CBWD1-218ENST00000498044 ANKRD36CQ5JPF3 1778 aa-1.34□□□□□ -2.62
CBWD1-218ENST00000498044 DOT1LQ8TEK3 1739 aa-1.35□□□□□ -2.62
CBWD1-218ENST00000498044 LRRC9Q6ZRR7 1453 aa-1.36□□□□□ -2.63
CBWD1-218ENST00000498044 NRXN1Q9ULB1 1477 aa-1.36□□□□□ -2.63
CBWD1-218ENST00000498044 RAPGEF2Q9Y4G8 1499 aa-1.36□□□□□ -2.63
CBWD1-218ENST00000498044 DEPDC5O75140 1603 aa-1.36□□□□□ -2.63
CBWD1-218ENST00000498044 PMCHL2Q9BQD1 86 aa-1.36□□□□□ -2.63
CBWD1-218ENST00000498044 NWD1Q149M9 1564 aa-1.37□□□□□ -2.63
CBWD1-218ENST00000498044 CDC42BPGQ6DT37 1551 aa-1.37□□□□□ -2.63
CBWD1-218ENST00000498044 PRLHP81277 87 aa-1.37□□□□□ -2.63
CBWD1-218ENST00000498044 PSENENQ9NZ42 101 aa-1.37□□□□□ -2.63
CBWD1-218ENST00000498044 AP4S1Q9Y587 144 aa-1.37□□□□□ -2.63
CBWD1-218ENST00000498044 MED14O60244 1454 aa-1.37□□□□□ -2.63
CBWD1-218ENST00000498044 LRRC7Q96NW7 1537 aa-1.38□□□□□ -2.63
CBWD1-218ENST00000498044 ATOX1O00244 68 aa-1.38□□□□□ -2.63
CBWD1-218ENST00000498044 IGLC2P0DOY2 106 aa-1.38□□□□□ -2.63
CBWD1-218ENST00000498044 IGLC3P0DOY3 106 aa-1.38□□□□□ -2.63
CBWD1-218ENST00000498044 DDX60LQ5H9U9 1706 aaKnown RBP-1.38□□□□□ -2.63
CBWD1-218ENST00000498044 TMEM218A2RU14 115 aa-1.39□□□□□ -2.63
CBWD1-218ENST00000498044 COX7BP24311 80 aa-1.39□□□□□ -2.63
CBWD1-218ENST00000498044 ANKRD36BQ8N2N9 1353 aa-1.39□□□□□ -2.63
CBWD1-218ENST00000498044 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.39□□□□□ -2.63
CBWD1-218ENST00000498044 CLPSL2Q6UWE3 100 aa-1.4□□□□□ -2.63
CBWD1-218ENST00000498044 SERP2Q8N6R1 65 aa-1.4□□□□□ -2.63
CBWD1-218ENST00000498044 MT-ATP8P03928 68 aa-1.41□□□□□ -2.64
CBWD1-218ENST00000498044 ZNF831Q5JPB2 1677 aa-1.42□□□□□ -2.64
CBWD1-218ENST00000498044 S100PP25815 95 aa-1.42□□□□□ -2.64
CBWD1-218ENST00000498044 HMGN3Q15651 99 aa-1.42□□□□□ -2.64
CBWD1-218ENST00000498044 ALKAL2Q6UX46 152 aa-1.42□□□□□ -2.64
CBWD1-218ENST00000498044 UBE2D4Q9Y2X8 147 aa-1.42□□□□□ -2.64
CBWD1-218ENST00000498044 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.42□□□□□ -2.64
CBWD1-218ENST00000498044 ITSN1Q15811 1721 aa-1.43□□□□□ -2.64
CBWD1-218ENST00000498044 CDC42BPAQ5VT25 1732 aa-1.43□□□□□ -2.64
CBWD1-218ENST00000498044 MYO3AQ8NEV4 1616 aa-1.43□□□□□ -2.64
CBWD1-218ENST00000498044 MAGI3Q5TCQ9 1506 aa-1.43□□□□□ -2.64
CBWD1-218ENST00000498044 C3orf79P0CE67 100 aa-1.43□□□□□ -2.64
CBWD1-218ENST00000498044 ARFGEF2Q9Y6D5 1785 aa-1.44□□□□□ -2.64
CBWD1-218ENST00000498044 S100A10P60903 97 aa-1.44□□□□□ -2.64
CBWD1-218ENST00000498044 RPS29P62273 56 aaKnown RBP-1.44□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms