RNA–Protein interactions for RNA: ENST00000498044.6

CBWD1-218, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-218ENST00000498044 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
CBWD1-218ENST00000498044 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
CBWD1-218ENST00000498044 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
CBWD1-218ENST00000498044 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
CBWD1-218ENST00000498044 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
CBWD1-218ENST00000498044 FOXD1Q16676 465 aa18.46■□□□□ 0.55
CBWD1-218ENST00000498044 ADRA2BP18089 450 aa18.01■□□□□ 0.47
CBWD1-218ENST00000498044 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
CBWD1-218ENST00000498044 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
CBWD1-218ENST00000498044 MSH5O43196 834 aa16.96■□□□□ 0.31
CBWD1-218ENST00000498044 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
CBWD1-218ENST00000498044 KCNA4P22459 653 aa16.78■□□□□ 0.28
CBWD1-218ENST00000498044 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
CBWD1-218ENST00000498044 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
CBWD1-218ENST00000498044 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
CBWD1-218ENST00000498044 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
CBWD1-218ENST00000498044 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
CBWD1-218ENST00000498044 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
CBWD1-218ENST00000498044 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
CBWD1-218ENST00000498044 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
CBWD1-218ENST00000498044 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
CBWD1-218ENST00000498044 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
CBWD1-218ENST00000498044 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
CBWD1-218ENST00000498044 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
CBWD1-218ENST00000498044 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
CBWD1-218ENST00000498044 ZBTB22O15209 634 aa15.41■□□□□ 0.06
CBWD1-218ENST00000498044 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
CBWD1-218ENST00000498044 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
CBWD1-218ENST00000498044 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
CBWD1-218ENST00000498044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 0
CBWD1-218ENST00000498044 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
CBWD1-218ENST00000498044 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
CBWD1-218ENST00000498044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
CBWD1-218ENST00000498044 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
CBWD1-218ENST00000498044 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
CBWD1-218ENST00000498044 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
CBWD1-218ENST00000498044 APLP2Q06481 763 aa14.6□□□□□ -0.07
CBWD1-218ENST00000498044 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
CBWD1-218ENST00000498044 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
CBWD1-218ENST00000498044 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
CBWD1-218ENST00000498044 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
CBWD1-218ENST00000498044 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
CBWD1-218ENST00000498044 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
CBWD1-218ENST00000498044 CAPN15O75808 1086 aa14.26□□□□□ -0.13
CBWD1-218ENST00000498044 POLA2Q14181 598 aa14.11□□□□□ -0.15
CBWD1-218ENST00000498044 FKBP8Q14318 412 aa14.11□□□□□ -0.15
CBWD1-218ENST00000498044 FBLN2P98095 1184 aa14.01□□□□□ -0.17
CBWD1-218ENST00000498044 ABCB7O75027 752 aa13.99□□□□□ -0.17
CBWD1-218ENST00000498044 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
CBWD1-218ENST00000498044 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
CBWD1-218ENST00000498044 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
CBWD1-218ENST00000498044 DSG3P32926 999 aa13.92□□□□□ -0.18
CBWD1-218ENST00000498044 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
CBWD1-218ENST00000498044 PROM2Q8N271 834 aa13.62□□□□□ -0.23
CBWD1-218ENST00000498044 FBXO3Q9UK99 471 aa13.6□□□□□ -0.23
CBWD1-218ENST00000498044 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
CBWD1-218ENST00000498044 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
CBWD1-218ENST00000498044 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
CBWD1-218ENST00000498044 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
CBWD1-218ENST00000498044 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
CBWD1-218ENST00000498044 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
CBWD1-218ENST00000498044 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
CBWD1-218ENST00000498044 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
CBWD1-218ENST00000498044 RTN4Q9NQC3 1192 aaKnown RBP13.35□□□□□ -0.27
CBWD1-218ENST00000498044 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
CBWD1-218ENST00000498044 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
CBWD1-218ENST00000498044 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
CBWD1-218ENST00000498044 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
CBWD1-218ENST00000498044 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
CBWD1-218ENST00000498044 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
CBWD1-218ENST00000498044 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CBWD1-218ENST00000498044 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
CBWD1-218ENST00000498044 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
CBWD1-218ENST00000498044 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
CBWD1-218ENST00000498044 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
CBWD1-218ENST00000498044 SPOCK2Q92563 424 aa13.01□□□□□ -0.33
CBWD1-218ENST00000498044 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
CBWD1-218ENST00000498044 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
CBWD1-218ENST00000498044 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
CBWD1-218ENST00000498044 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CBWD1-218ENST00000498044 PKD2Q13563 968 aa12.84□□□□□ -0.35
CBWD1-218ENST00000498044 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
CBWD1-218ENST00000498044 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
CBWD1-218ENST00000498044 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
CBWD1-218ENST00000498044 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
CBWD1-218ENST00000498044 DCAF8L2P0C7V8 631 aa12.69□□□□□ -0.38
CBWD1-218ENST00000498044 NUBP1P53384 320 aa12.69□□□□□ -0.38
CBWD1-218ENST00000498044 GSE1Q14687 1217 aa12.69□□□□□ -0.38
CBWD1-218ENST00000498044 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
CBWD1-218ENST00000498044 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
CBWD1-218ENST00000498044 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
CBWD1-218ENST00000498044 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CBWD1-218ENST00000498044 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
CBWD1-218ENST00000498044 CHRDL2Q6WN34 429 aa12.61□□□□□ -0.39
CBWD1-218ENST00000498044 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
CBWD1-218ENST00000498044 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
CBWD1-218ENST00000498044 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
CBWD1-218ENST00000498044 RGL2O15211 777 aa12.57□□□□□ -0.4
CBWD1-218ENST00000498044 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
CBWD1-218ENST00000498044 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms