RNA–Protein interactions for RNA: ENST00000497622.1

FAM3C-205, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-205ENST00000497622 IGF2RP11717 2491 aa1.66□□□□□ -2.14
FAM3C-205ENST00000497622 WNK1Q9H4A3 2382 aa1.65□□□□□ -2.14
FAM3C-205ENST00000497622 SPRR1AP35321 89 aa1.65□□□□□ -2.15
FAM3C-205ENST00000497622 CHD7Q9P2D1 2997 aa1.65□□□□□ -2.15
FAM3C-205ENST00000497622 HTN1P15515 57 aa1.64□□□□□ -2.15
FAM3C-205ENST00000497622 H1FX-AS1Q4G0G2 97 aa1.64□□□□□ -2.15
FAM3C-205ENST00000497622 SPACA4Q8TDM5 124 aa1.64□□□□□ -2.15
FAM3C-205ENST00000497622 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
FAM3C-205ENST00000497622 ACACAQ13085 2346 aa1.63□□□□□ -2.15
FAM3C-205ENST00000497622 PTPRZ1P23471 2315 aaPredicted RBP1.63□□□□□ -2.15
FAM3C-205ENST00000497622 H3BUX3 64 aa1.62□□□□□ -2.15
FAM3C-205ENST00000497622 RPL37P61927 97 aaKnown RBP1.62□□□□□ -2.15
FAM3C-205ENST00000497622 C10orf99Q6UWK7 81 aa1.62□□□□□ -2.15
FAM3C-205ENST00000497622 COL6A3P12111 3177 aa1.62□□□□□ -2.15
FAM3C-205ENST00000497622 AKAP6Q13023 2319 aa1.62□□□□□ -2.15
FAM3C-205ENST00000497622 FN1P02751 2386 aaKnown RBP1.62□□□□□ -2.15
FAM3C-205ENST00000497622 SPTA1P02549 2419 aa1.61□□□□□ -2.15
FAM3C-205ENST00000497622 DEFB130BP0DP73 79 aa1.61□□□□□ -2.15
FAM3C-205ENST00000497622 DEFB130AP0DP74 79 aa1.61□□□□□ -2.15
FAM3C-205ENST00000497622 SPRR1BP22528 89 aa1.61□□□□□ -2.15
FAM3C-205ENST00000497622 Q6ZRN7 208 aaPredicted RBP1.61□□□□□ -2.15
FAM3C-205ENST00000497622 CEP350Q5VT06 3117 aa1.61□□□□□ -2.15
FAM3C-205ENST00000497622 APC2O95996 2303 aa1.6□□□□□ -2.15
FAM3C-205ENST00000497622 OTOGLQ3ZCN5 2332 aa1.6□□□□□ -2.15
FAM3C-205ENST00000497622 PCNX1Q96RV3 2341 aa1.6□□□□□ -2.15
FAM3C-205ENST00000497622 DEFB119Q8N690 84 aa1.6□□□□□ -2.15
FAM3C-205ENST00000497622 FLG2Q5D862 2391 aaPredicted RBP1.6□□□□□ -2.15
FAM3C-205ENST00000497622 TENM2Q9NT68 2774 aa1.6□□□□□ -2.15
FAM3C-205ENST00000497622 PKDREJQ9NTG1 2253 aa1.59□□□□□ -2.15
FAM3C-205ENST00000497622 LYNX1P0DP58 116 aa1.59□□□□□ -2.15
FAM3C-205ENST00000497622 DEFB133Q30KQ1 61 aa1.59□□□□□ -2.15
FAM3C-205ENST00000497622 UBE2DNLQ8IWF7 75 aa1.59□□□□□ -2.15
FAM3C-205ENST00000497622 SPTBN2O15020 2390 aa1.59□□□□□ -2.16
FAM3C-205ENST00000497622 MAP1BP46821 2468 aaKnown RBP1.58□□□□□ -2.16
FAM3C-205ENST00000497622 NOP10Q9NPE3 64 aaKnown RBP1.58□□□□□ -2.16
FAM3C-205ENST00000497622 CEP250Q9BV73 2442 aa1.58□□□□□ -2.16
FAM3C-205ENST00000497622 K7EIL1 84 aa1.57□□□□□ -2.16
FAM3C-205ENST00000497622 PRLHP81277 87 aa1.57□□□□□ -2.16
FAM3C-205ENST00000497622 DEFB123Q8N688 67 aa1.57□□□□□ -2.16
FAM3C-205ENST00000497622 SPTBN4Q9H254 2564 aa1.57□□□□□ -2.16
FAM3C-205ENST00000497622 PIEZO2Q9H5I5 2752 aa1.56□□□□□ -2.16
FAM3C-205ENST00000497622 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
FAM3C-205ENST00000497622 PRO0255Q9UI72 69 aa1.56□□□□□ -2.16
FAM3C-205ENST00000497622 LELP1Q5T871 98 aa1.55□□□□□ -2.16
FAM3C-205ENST00000497622 CSPG4Q6UVK1 2322 aa1.55□□□□□ -2.16
FAM3C-205ENST00000497622 FAM186AA6NE01 2351 aa1.55□□□□□ -2.16
FAM3C-205ENST00000497622 OTOGQ6ZRI0 2925 aa1.54□□□□□ -2.16
FAM3C-205ENST00000497622 NBEAQ8NFP9 2946 aa1.54□□□□□ -2.16
FAM3C-205ENST00000497622 CHD6Q8TD26 2715 aa1.54□□□□□ -2.16
FAM3C-205ENST00000497622 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
FAM3C-205ENST00000497622 TNRC18O15417 2968 aaPredicted RBP1.53□□□□□ -2.16
FAM3C-205ENST00000497622 DEFB136Q30KP8 78 aa1.53□□□□□ -2.16
FAM3C-205ENST00000497622 ASH1LQ9NR48 2969 aaKnown RBP1.53□□□□□ -2.16
FAM3C-205ENST00000497622 FAM208BQ5VWN6 2430 aa1.52□□□□□ -2.17
FAM3C-205ENST00000497622 UBR5O95071 2799 aaPredicted RBP1.52□□□□□ -2.17
FAM3C-205ENST00000497622 SPINK1P00995 79 aa1.52□□□□□ -2.17
FAM3C-205ENST00000497622 ROS1P08922 2347 aa1.51□□□□□ -2.17
FAM3C-205ENST00000497622 PRUNE2Q8WUY3 3088 aa1.51□□□□□ -2.17
FAM3C-205ENST00000497622 ZZEF1O43149 2961 aa1.5□□□□□ -2.17
FAM3C-205ENST00000497622 GVINP1Q7Z2Y8 2422 aa1.5□□□□□ -2.17
FAM3C-205ENST00000497622 S4R3F8 94 aa1.5□□□□□ -2.17
FAM3C-205ENST00000497622 CELSR2Q9HCU4 2923 aa1.5□□□□□ -2.17
FAM3C-205ENST00000497622 SRCAPQ6ZRS2 3230 aa1.49□□□□□ -2.17
FAM3C-205ENST00000497622 CFAP54Q96N23 3096 aa1.49□□□□□ -2.17
FAM3C-205ENST00000497622 CACNA1HO95180 2353 aa1.49□□□□□ -2.17
FAM3C-205ENST00000497622 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
FAM3C-205ENST00000497622 ZNF462Q96JM2 2506 aa1.49□□□□□ -2.17
FAM3C-205ENST00000497622 DSPP15924 2871 aaKnown RBP1.49□□□□□ -2.17
FAM3C-205ENST00000497622 RP1L1Q8IWN7 2480 aaPredicted RBP1.48□□□□□ -2.17
FAM3C-205ENST00000497622 APLNQ9ULZ1 77 aa1.48□□□□□ -2.17
FAM3C-205ENST00000497622 U3KQA8 63 aa1.48□□□□□ -2.17
FAM3C-205ENST00000497622 NCOR1O75376 2440 aa1.47□□□□□ -2.17
FAM3C-205ENST00000497622 FBN3Q75N90 2809 aa1.47□□□□□ -2.17
FAM3C-205ENST00000497622 A0A096LPF7 62 aa1.47□□□□□ -2.17
FAM3C-205ENST00000497622 EP300Q09472 2414 aaPredicted RBP1.47□□□□□ -2.17
FAM3C-205ENST00000497622 MAP1AP78559 2803 aaPredicted RBP1.47□□□□□ -2.17
FAM3C-205ENST00000497622 ITPR1Q14643 2758 aa1.47□□□□□ -2.17
FAM3C-205ENST00000497622 NCOR2Q9Y618 2525 aa1.46□□□□□ -2.18
FAM3C-205ENST00000497622 GOLGB1Q14789 3259 aaKnown RBP1.46□□□□□ -2.18
FAM3C-205ENST00000497622 PCNTO95613 3336 aa1.46□□□□□ -2.18
FAM3C-205ENST00000497622 C2CD3Q4AC94 2353 aa1.46□□□□□ -2.18
FAM3C-205ENST00000497622 H3BNG1 76 aa1.46□□□□□ -2.18
FAM3C-205ENST00000497622 DEFB103AP81534 67 aa1.46□□□□□ -2.18
FAM3C-205ENST00000497622 MUC6Q6W4X9 2439 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 SPG11Q96JI7 2443 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 VWFP04275 2813 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 AKAP13Q12802 2813 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 CCDC168Q8NDH2 2452 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 SRRM2Q9UQ35 2752 aaKnown RBP1.45□□□□□ -2.18
FAM3C-205ENST00000497622 CENPFP49454 3210 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 CREBBPQ92793 2442 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 VPS13AQ96RL7 3174 aa1.45□□□□□ -2.18
FAM3C-205ENST00000497622 A0A096LNI7 61 aa1.44□□□□□ -2.18
FAM3C-205ENST00000497622 A0A0D9SG42 100 aa1.44□□□□□ -2.18
FAM3C-205ENST00000497622 KALRNO60229 2985 aa1.44□□□□□ -2.18
FAM3C-205ENST00000497622 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
FAM3C-205ENST00000497622 LRBAP50851 2863 aa1.44□□□□□ -2.18
FAM3C-205ENST00000497622 ABCA2Q9BZC7 2435 aa1.44□□□□□ -2.18
FAM3C-205ENST00000497622 JMJD1CQ15652 2540 aa1.43□□□□□ -2.18
FAM3C-205ENST00000497622 UTRNP46939 3433 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms