RNA–Protein interactions for RNA: ENST00000497622.1

FAM3C-205, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-205ENST00000497622 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
FAM3C-205ENST00000497622 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
FAM3C-205ENST00000497622 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
FAM3C-205ENST00000497622 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
FAM3C-205ENST00000497622 FOXD1Q16676 465 aa20.64■□□□□ 0.89
FAM3C-205ENST00000497622 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
FAM3C-205ENST00000497622 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
FAM3C-205ENST00000497622 ADRA2BP18089 450 aa19.45■□□□□ 0.7
FAM3C-205ENST00000497622 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
FAM3C-205ENST00000497622 MSH5O43196 834 aa19.28■□□□□ 0.68
FAM3C-205ENST00000497622 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
FAM3C-205ENST00000497622 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
FAM3C-205ENST00000497622 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
FAM3C-205ENST00000497622 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
FAM3C-205ENST00000497622 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
FAM3C-205ENST00000497622 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
FAM3C-205ENST00000497622 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
FAM3C-205ENST00000497622 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
FAM3C-205ENST00000497622 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
FAM3C-205ENST00000497622 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
FAM3C-205ENST00000497622 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
FAM3C-205ENST00000497622 KCNA4P22459 653 aa16.66■□□□□ 0.26
FAM3C-205ENST00000497622 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
FAM3C-205ENST00000497622 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
FAM3C-205ENST00000497622 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
FAM3C-205ENST00000497622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
FAM3C-205ENST00000497622 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
FAM3C-205ENST00000497622 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
FAM3C-205ENST00000497622 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
FAM3C-205ENST00000497622 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
FAM3C-205ENST00000497622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
FAM3C-205ENST00000497622 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
FAM3C-205ENST00000497622 CAPN15O75808 1086 aa15.68■□□□□ 0.1
FAM3C-205ENST00000497622 APLP2Q06481 763 aa15.65■□□□□ 0.1
FAM3C-205ENST00000497622 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
FAM3C-205ENST00000497622 SAMD1Q6SPF0 538 aaPredicted RBP15.58■□□□□ 0.08
FAM3C-205ENST00000497622 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
FAM3C-205ENST00000497622 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
FAM3C-205ENST00000497622 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
FAM3C-205ENST00000497622 DSG3P32926 999 aa15.47■□□□□ 0.07
FAM3C-205ENST00000497622 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
FAM3C-205ENST00000497622 ABCB7O75027 752 aa15.3■□□□□ 0.04
FAM3C-205ENST00000497622 ZBTB22O15209 634 aa15.27■□□□□ 0.04
FAM3C-205ENST00000497622 POLA2Q14181 598 aa15.11■□□□□ 0.01
FAM3C-205ENST00000497622 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
FAM3C-205ENST00000497622 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
FAM3C-205ENST00000497622 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
FAM3C-205ENST00000497622 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
FAM3C-205ENST00000497622 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
FAM3C-205ENST00000497622 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
FAM3C-205ENST00000497622 POTEHQ6S545 545 aa14.65□□□□□ -0.06
FAM3C-205ENST00000497622 FBLN2P98095 1184 aa14.61□□□□□ -0.07
FAM3C-205ENST00000497622 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
FAM3C-205ENST00000497622 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
FAM3C-205ENST00000497622 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
FAM3C-205ENST00000497622 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
FAM3C-205ENST00000497622 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
FAM3C-205ENST00000497622 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
FAM3C-205ENST00000497622 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
FAM3C-205ENST00000497622 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
FAM3C-205ENST00000497622 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
FAM3C-205ENST00000497622 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
FAM3C-205ENST00000497622 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
FAM3C-205ENST00000497622 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
FAM3C-205ENST00000497622 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
FAM3C-205ENST00000497622 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
FAM3C-205ENST00000497622 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
FAM3C-205ENST00000497622 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
FAM3C-205ENST00000497622 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
FAM3C-205ENST00000497622 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
FAM3C-205ENST00000497622 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
FAM3C-205ENST00000497622 HAX1O00165 279 aa13.8□□□□□ -0.2
FAM3C-205ENST00000497622 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
FAM3C-205ENST00000497622 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
FAM3C-205ENST00000497622 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
FAM3C-205ENST00000497622 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
FAM3C-205ENST00000497622 PROM2Q8N271 834 aa13.56□□□□□ -0.24
FAM3C-205ENST00000497622 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
FAM3C-205ENST00000497622 EVX2Q03828 476 aa13.55□□□□□ -0.24
FAM3C-205ENST00000497622 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
FAM3C-205ENST00000497622 FKBP8Q14318 412 aa13.49□□□□□ -0.25
FAM3C-205ENST00000497622 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
FAM3C-205ENST00000497622 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
FAM3C-205ENST00000497622 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
FAM3C-205ENST00000497622 GABBR2O75899 941 aa13.31□□□□□ -0.28
FAM3C-205ENST00000497622 MIER1Q8N108 512 aa13.31□□□□□ -0.28
FAM3C-205ENST00000497622 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
FAM3C-205ENST00000497622 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
FAM3C-205ENST00000497622 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
FAM3C-205ENST00000497622 CLCN6P51797 869 aa13.25□□□□□ -0.29
FAM3C-205ENST00000497622 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
FAM3C-205ENST00000497622 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
FAM3C-205ENST00000497622 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
FAM3C-205ENST00000497622 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
FAM3C-205ENST00000497622 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
FAM3C-205ENST00000497622 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
FAM3C-205ENST00000497622 DCBLD2Q96PD2 775 aa13.06□□□□□ -0.32
FAM3C-205ENST00000497622 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
FAM3C-205ENST00000497622 RASEFQ8IZ41 740 aa13□□□□□ -0.33
FAM3C-205ENST00000497622 CCDC61Q9Y6R9 512 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms