RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 KRTAP13-2Q52LG2 175 aa11.81□□□□□ -0.52
CTSD-206ENST00000497544 C3orf22Q8N5N4 141 aa11.81□□□□□ -0.52
CTSD-206ENST00000497544 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
CTSD-206ENST00000497544 LINC01547P58512 204 aaPredicted RBP11.8□□□□□ -0.52
CTSD-206ENST00000497544 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
CTSD-206ENST00000497544 Q8N377 158 aa11.79□□□□□ -0.52
CTSD-206ENST00000497544 DNAL4O96015 105 aa11.78□□□□□ -0.52
CTSD-206ENST00000497544 OCIAD2Q56VL3 154 aa11.78□□□□□ -0.52
CTSD-206ENST00000497544 C9orf118A6NHY6 69 aa11.77□□□□□ -0.53
CTSD-206ENST00000497544 H3BUT2 72 aa11.77□□□□□ -0.53
CTSD-206ENST00000497544 TAX1BP3O14907 124 aa11.77□□□□□ -0.53
CTSD-206ENST00000497544 GHRHP01286 108 aa11.76□□□□□ -0.53
CTSD-206ENST00000497544 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
CTSD-206ENST00000497544 C9orf153Q5TBE3 101 aa11.76□□□□□ -0.53
CTSD-206ENST00000497544 LYRM7Q5U5X0 104 aa11.76□□□□□ -0.53
CTSD-206ENST00000497544 MOBPQ13875 183 aa11.75□□□□□ -0.53
CTSD-206ENST00000497544 SSBP3-AS1Q7Z2R9 100 aa11.74□□□□□ -0.53
CTSD-206ENST00000497544 PPDPFLQ8WWR9 84 aa11.74□□□□□ -0.53
CTSD-206ENST00000497544 LST1O00453 97 aa11.73□□□□□ -0.53
CTSD-206ENST00000497544 SMIM29Q86T20 159 aa11.73□□□□□ -0.53
CTSD-206ENST00000497544 TRACP01848 142 aa11.72□□□□□ -0.53
CTSD-206ENST00000497544 ATXN8Q156A1 80 aa11.71□□□□□ -0.53
CTSD-206ENST00000497544 F8WEM9 126 aa11.7□□□□□ -0.54
CTSD-206ENST00000497544 TCL1BO95988 128 aa11.7□□□□□ -0.54
CTSD-206ENST00000497544 Q8NBF4 154 aa11.7□□□□□ -0.54
CTSD-206ENST00000497544 ORMDL1Q9P0S3 153 aa11.7□□□□□ -0.54
CTSD-206ENST00000497544 H3BQ85 93 aa11.69□□□□□ -0.54
CTSD-206ENST00000497544 FABP2P12104 132 aa11.69□□□□□ -0.54
CTSD-206ENST00000497544 LINC00304Q8N9R0 145 aa11.69□□□□□ -0.54
CTSD-206ENST00000497544 TRBV20-1A0A075B6N2 111 aa11.68□□□□□ -0.54
CTSD-206ENST00000497544 C4orf48Q5BLP8 95 aa11.68□□□□□ -0.54
CTSD-206ENST00000497544 A0A1W2PPM0 123 aa11.67□□□□□ -0.54
CTSD-206ENST00000497544 TMEM256-PLSCR3K7ERE1 68 aa11.65□□□□□ -0.54
CTSD-206ENST00000497544 SPAG11AQ6PDA7 123 aa11.65□□□□□ -0.54
CTSD-206ENST00000497544 NDUFV3P56181 108 aaKnown RBP11.64□□□□□ -0.55
CTSD-206ENST00000497544 LPAP08519 4548 aa11.62□□□□□ -0.55
CTSD-206ENST00000497544 BAALC-AS2P0C853 105 aa11.61□□□□□ -0.55
CTSD-206ENST00000497544 MUC2Q02817 5179 aa11.58□□□□□ -0.55
CTSD-206ENST00000497544 IGLV8-61A0A075B6I0 122 aa11.58□□□□□ -0.56
CTSD-206ENST00000497544 UBE2V1Q13404 147 aa11.58□□□□□ -0.56
CTSD-206ENST00000497544 Q6JHZ5 121 aa11.58□□□□□ -0.56
CTSD-206ENST00000497544 H3BMG7 143 aa11.57□□□□□ -0.56
CTSD-206ENST00000497544 SPINK1P00995 79 aa11.57□□□□□ -0.56
CTSD-206ENST00000497544 SPCS1Q9Y6A9 102 aa11.57□□□□□ -0.56
CTSD-206ENST00000497544 HRCT1Q6UXD1 115 aa11.56□□□□□ -0.56
CTSD-206ENST00000497544 C9JAW5 83 aa11.55□□□□□ -0.56
CTSD-206ENST00000497544 A0A0G2JQZ4 141 aa11.54□□□□□ -0.56
CTSD-206ENST00000497544 CD164Q04900 197 aa11.52□□□□□ -0.57
CTSD-206ENST00000497544 IGFL1Q6UW32 110 aa11.52□□□□□ -0.57
CTSD-206ENST00000497544 ANKRD29Q8N6D5 301 aa11.52□□□□□ -0.57
CTSD-206ENST00000497544 A0A1B0GV72 72 aa11.5□□□□□ -0.57
CTSD-206ENST00000497544 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
CTSD-206ENST00000497544 RBM3P98179 157 aaKnown RBP11.47□□□□□ -0.57
CTSD-206ENST00000497544 LCE2AQ5TA79 106 aaPredicted RBP11.47□□□□□ -0.57
CTSD-206ENST00000497544 K7EP34 96 aa11.46□□□□□ -0.57
CTSD-206ENST00000497544 H3BT86 120 aa11.45□□□□□ -0.58
CTSD-206ENST00000497544 GTF2H5Q6ZYL4 71 aa11.45□□□□□ -0.58
CTSD-206ENST00000497544 MTURNQ8N3F0 131 aa11.45□□□□□ -0.58
CTSD-206ENST00000497544 LIMD2Q9BT23 127 aa11.45□□□□□ -0.58
CTSD-206ENST00000497544 JMJD7-PLA2G4BH0Y9G9 81 aa11.43□□□□□ -0.58
CTSD-206ENST00000497544 DSCR8Q96T75 97 aa11.43□□□□□ -0.58
CTSD-206ENST00000497544 TEN1Q86WV5 123 aa11.42□□□□□ -0.58
CTSD-206ENST00000497544 TRBV7-7A0A0K0K1E9 115 aa11.4□□□□□ -0.58
CTSD-206ENST00000497544 PRR4Q16378 134 aa11.4□□□□□ -0.58
CTSD-206ENST00000497544 RETNLBQ9BQ08 111 aa11.4□□□□□ -0.58
CTSD-206ENST00000497544 A0A0U1RQV1 116 aa11.39□□□□□ -0.59
CTSD-206ENST00000497544 Q6Q795 121 aa11.39□□□□□ -0.59
CTSD-206ENST00000497544 TRBV7-4A0A0J9YYF1 115 aa11.38□□□□□ -0.59
CTSD-206ENST00000497544 Q5XG85 94 aa11.37□□□□□ -0.59
CTSD-206ENST00000497544 A0A1W2PNM2 257 aa11.36□□□□□ -0.59
CTSD-206ENST00000497544 CCKP06307 115 aa11.35□□□□□ -0.59
CTSD-206ENST00000497544 VPS25Q9BRG1 176 aa11.34□□□□□ -0.59
CTSD-206ENST00000497544 SMCPP49901 116 aaPredicted RBP11.33□□□□□ -0.6
CTSD-206ENST00000497544 PDE6GP18545 87 aa11.32□□□□□ -0.6
CTSD-206ENST00000497544 OBSCN-AS1Q96MR7 158 aa11.32□□□□□ -0.6
CTSD-206ENST00000497544 C14orf132Q9NPU4 83 aa11.32□□□□□ -0.6
CTSD-206ENST00000497544 CRCT1Q9UGL9 99 aa11.32□□□□□ -0.6
CTSD-206ENST00000497544 PRO0461Q9UI25 63 aa11.32□□□□□ -0.6
CTSD-206ENST00000497544 A0A087WSZ3 146 aa11.31□□□□□ -0.6
CTSD-206ENST00000497544 FP248Q71RG6 208 aaPredicted RBP11.31□□□□□ -0.6
CTSD-206ENST00000497544 SS18L2Q9UHA2 77 aa11.31□□□□□ -0.6
CTSD-206ENST00000497544 LOC110117498A0A087WWA1 95 aa11.3□□□□□ -0.6
CTSD-206ENST00000497544 FSIP2Q5CZC0 6907 aa11.29□□□□□ -0.6
CTSD-206ENST00000497544 IGLV7-46A0A075B6I9 117 aa11.29□□□□□ -0.6
CTSD-206ENST00000497544 F8W1H4 67 aa11.29□□□□□ -0.6
CTSD-206ENST00000497544 Q6ZQT0 140 aa11.28□□□□□ -0.6
CTSD-206ENST00000497544 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
CTSD-206ENST00000497544 C1orf195Q5TG92 126 aa11.27□□□□□ -0.61
CTSD-206ENST00000497544 A0A1B0GV90 55 aa11.25□□□□□ -0.61
CTSD-206ENST00000497544 C21orf62-AS1Q17RA5 79 aa11.25□□□□□ -0.61
CTSD-206ENST00000497544 A0A1B0GW54 56 aa11.2□□□□□ -0.62
CTSD-206ENST00000497544 ETDBQ3ZM63 59 aa11.17□□□□□ -0.62
CTSD-206ENST00000497544 TPRXLQ17RH7 258 aa11.15□□□□□ -0.62
CTSD-206ENST00000497544 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
CTSD-206ENST00000497544 Q96NJ1 140 aa11.12□□□□□ -0.63
CTSD-206ENST00000497544 KRTAP13-3Q3SY46 172 aa11.11□□□□□ -0.63
CTSD-206ENST00000497544 CDIP1Q9H305 208 aa11.1□□□□□ -0.63
CTSD-206ENST00000497544 LINC00472Q9H8W2 130 aa11.1□□□□□ -0.63
CTSD-206ENST00000497544 IGKV4-1P06312 121 aa11.09□□□□□ -0.63
CTSD-206ENST00000497544 DEFB116Q30KQ4 102 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms