RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
NPHP1-211ENST00000496524 PLAC8Q9NZF1 115 aa5□□□□□ -1.61
NPHP1-211ENST00000496524 BPTFQ12830 3046 aa4.99□□□□□ -1.61
NPHP1-211ENST00000496524 CASC10Q5T4H9 136 aa4.98□□□□□ -1.61
NPHP1-211ENST00000496524 Q8NDZ9 215 aa4.97□□□□□ -1.61
NPHP1-211ENST00000496524 KRTAP26-1Q6PEX3 210 aa4.96□□□□□ -1.62
NPHP1-211ENST00000496524 ADM2Q7Z4H4 148 aa4.96□□□□□ -1.62
NPHP1-211ENST00000496524 PANO1I0J062 215 aa4.94□□□□□ -1.62
NPHP1-211ENST00000496524 USP24Q9UPU5 2620 aa4.92□□□□□ -1.62
NPHP1-211ENST00000496524 SRCAPQ6ZRS2 3230 aa4.92□□□□□ -1.62
NPHP1-211ENST00000496524 DMBT1Q9UGM3 2413 aaPredicted RBP4.9□□□□□ -1.62
NPHP1-211ENST00000496524 MAST4O15021 2626 aa4.9□□□□□ -1.63
NPHP1-211ENST00000496524 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
NPHP1-211ENST00000496524 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
NPHP1-211ENST00000496524 TNP1P09430 55 aa4.85□□□□□ -1.63
NPHP1-211ENST00000496524 KRTAP10-3P60369 221 aa4.85□□□□□ -1.63
NPHP1-211ENST00000496524 HELZ2Q9BYK8 2649 aaKnown RBP4.84□□□□□ -1.64
NPHP1-211ENST00000496524 A8MUU9 505 aa4.82□□□□□ -1.64
NPHP1-211ENST00000496524 LCE6AA0A183 80 aa4.81□□□□□ -1.64
NPHP1-211ENST00000496524 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
NPHP1-211ENST00000496524 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
NPHP1-211ENST00000496524 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
NPHP1-211ENST00000496524 CENPFP49454 3210 aa4.78□□□□□ -1.64
NPHP1-211ENST00000496524 GCN1Q92616 2671 aaKnown RBP4.76□□□□□ -1.65
NPHP1-211ENST00000496524 CENPEQ02224 2701 aa4.76□□□□□ -1.65
NPHP1-211ENST00000496524 A8MU10 97 aa4.76□□□□□ -1.65
NPHP1-211ENST00000496524 KRTAP4-16G5E9R7 235 aaPredicted RBP4.75□□□□□ -1.65
NPHP1-211ENST00000496524 PRRC2CQ9Y520 2896 aaKnown RBP4.75□□□□□ -1.65
NPHP1-211ENST00000496524 NBEAL1Q6ZS30 2694 aa4.72□□□□□ -1.65
NPHP1-211ENST00000496524 ATRQ13535 2644 aa4.71□□□□□ -1.66
NPHP1-211ENST00000496524 MGAM2Q2M2H8 2515 aa4.7□□□□□ -1.66
NPHP1-211ENST00000496524 Q5VSD8 79 aa4.7□□□□□ -1.66
NPHP1-211ENST00000496524 NOTCH2NLQ7Z3S9 236 aa4.7□□□□□ -1.66
NPHP1-211ENST00000496524 NOTCH1P46531 2555 aa4.69□□□□□ -1.66
NPHP1-211ENST00000496524 HECTD1Q9ULT8 2610 aa4.66□□□□□ -1.66
NPHP1-211ENST00000496524 AKAP13Q12802 2813 aa4.66□□□□□ -1.66
NPHP1-211ENST00000496524 P0C880 135 aa4.64□□□□□ -1.67
NPHP1-211ENST00000496524 SETXQ7Z333 2677 aaKnown RBP4.64□□□□□ -1.67
NPHP1-211ENST00000496524 UNC79Q9P2D8 2635 aa4.63□□□□□ -1.67
NPHP1-211ENST00000496524 KRTAP1-3Q8IUG1 177 aa4.63□□□□□ -1.67
NPHP1-211ENST00000496524 STAB1Q9NY15 2570 aa4.63□□□□□ -1.67
NPHP1-211ENST00000496524 CFAP46Q8IYW2 2715 aa4.6□□□□□ -1.67
NPHP1-211ENST00000496524 KRTAP10-1P60331 282 aa4.6□□□□□ -1.67
NPHP1-211ENST00000496524 KRTAP1-1Q07627 177 aa4.59□□□□□ -1.67
NPHP1-211ENST00000496524 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
NPHP1-211ENST00000496524 KRTAP1-5Q9BYS1 174 aa4.57□□□□□ -1.68
NPHP1-211ENST00000496524 BAHCC1Q9P281 2608 aa4.56□□□□□ -1.68
NPHP1-211ENST00000496524 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
NPHP1-211ENST00000496524 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
NPHP1-211ENST00000496524 FLNAP21333 2647 aaKnown RBP4.54□□□□□ -1.68
NPHP1-211ENST00000496524 KRTAP10-2P60368 255 aa4.53□□□□□ -1.68
NPHP1-211ENST00000496524 KMT2BQ9UMN6 2715 aaPredicted RBP4.52□□□□□ -1.69
NPHP1-211ENST00000496524 CHD6Q8TD26 2715 aa4.49□□□□□ -1.69
NPHP1-211ENST00000496524 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
NPHP1-211ENST00000496524 ZNF292O60281 2723 aa4.49□□□□□ -1.69
NPHP1-211ENST00000496524 TEP1Q99973 2627 aaKnown RBP4.49□□□□□ -1.69
NPHP1-211ENST00000496524 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
NPHP1-211ENST00000496524 H0YAA0 97 aa4.47□□□□□ -1.69
NPHP1-211ENST00000496524 UTP20O75691 2785 aaKnown RBP4.47□□□□□ -1.69
NPHP1-211ENST00000496524 KRTAP13-1Q8IUC0 172 aa4.45□□□□□ -1.7
NPHP1-211ENST00000496524 COL6A5A8TX70 2615 aa4.45□□□□□ -1.7
NPHP1-211ENST00000496524 CEP350Q5VT06 3117 aa4.42□□□□□ -1.7
NPHP1-211ENST00000496524 EP400Q96L91 3159 aa4.41□□□□□ -1.7
NPHP1-211ENST00000496524 KRTAP13-2Q52LG2 175 aa4.41□□□□□ -1.7
NPHP1-211ENST00000496524 C5orf42Q9H799 3197 aa4.41□□□□□ -1.7
NPHP1-211ENST00000496524 A0A0C4DFX4 3053 aa4.39□□□□□ -1.71
NPHP1-211ENST00000496524 PCNTO95613 3336 aa4.38□□□□□ -1.71
NPHP1-211ENST00000496524 TEX15Q9BXT5 2789 aa4.36□□□□□ -1.71
NPHP1-211ENST00000496524 IGSF10Q6WRI0 2623 aa4.35□□□□□ -1.71
NPHP1-211ENST00000496524 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.71
NPHP1-211ENST00000496524 CFAP54Q96N23 3096 aa4.32□□□□□ -1.72
NPHP1-211ENST00000496524 INE1O15225 51 aa4.32□□□□□ -1.72
NPHP1-211ENST00000496524 NSD1Q96L73 2696 aaPredicted RBP4.31□□□□□ -1.72
NPHP1-211ENST00000496524 DNAH12Q6ZR08 3092 aa4.29□□□□□ -1.72
NPHP1-211ENST00000496524 APCP25054 2843 aa4.29□□□□□ -1.72
NPHP1-211ENST00000496524 XP32Q5T750 250 aa4.26□□□□□ -1.73
NPHP1-211ENST00000496524 UTRNP46939 3433 aa4.25□□□□□ -1.73
NPHP1-211ENST00000496524 ITPR2Q14571 2701 aa4.25□□□□□ -1.73
NPHP1-211ENST00000496524 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
NPHP1-211ENST00000496524 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
NPHP1-211ENST00000496524 NBEAL2Q6ZNJ1 2754 aa4.21□□□□□ -1.74
NPHP1-211ENST00000496524 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
NPHP1-211ENST00000496524 UBR5O95071 2799 aaPredicted RBP4.2□□□□□ -1.74
NPHP1-211ENST00000496524 GOLGB1Q14789 3259 aaKnown RBP4.2□□□□□ -1.74
NPHP1-211ENST00000496524 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
NPHP1-211ENST00000496524 FLNCQ14315 2725 aa4.19□□□□□ -1.74
NPHP1-211ENST00000496524 REV3LO60673 3130 aa4.19□□□□□ -1.74
NPHP1-211ENST00000496524 ITPR1Q14643 2758 aa4.18□□□□□ -1.74
NPHP1-211ENST00000496524 LAMA2P24043 3122 aaKnown RBP4.18□□□□□ -1.74
NPHP1-211ENST00000496524 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
NPHP1-211ENST00000496524 FREM2Q5SZK8 3169 aa4.15□□□□□ -1.75
NPHP1-211ENST00000496524 MAP1AP78559 2803 aaPredicted RBP4.14□□□□□ -1.75
NPHP1-211ENST00000496524 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
NPHP1-211ENST00000496524 TRANK1O15050 2925 aa4.09□□□□□ -1.75
NPHP1-211ENST00000496524 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
NPHP1-211ENST00000496524 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
NPHP1-211ENST00000496524 FRYQ5TBA9 3013 aa4.07□□□□□ -1.76
NPHP1-211ENST00000496524 DSPP15924 2871 aaKnown RBP4.06□□□□□ -1.76
NPHP1-211ENST00000496524 TRIOO75962 3097 aa4.06□□□□□ -1.76
NPHP1-211ENST00000496524 HIVEP1P15822 2718 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms