RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 PSMB2P49721 201 aa4.81□□□□□ -1.64
TM4SF1-204ENST00000493348 FXYD2P54710 66 aa4.81□□□□□ -1.64
TM4SF1-204ENST00000493348 LINC00483Q53H64 154 aa4.81□□□□□ -1.64
TM4SF1-204ENST00000493348 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
TM4SF1-204ENST00000493348 F8WEM9 126 aa4.8□□□□□ -1.64
TM4SF1-204ENST00000493348 TSPAN13O95857 204 aa4.8□□□□□ -1.64
TM4SF1-204ENST00000493348 MOBPQ13875 183 aa4.8□□□□□ -1.64
TM4SF1-204ENST00000493348 SPAG11AQ6PDA7 123 aa4.8□□□□□ -1.64
TM4SF1-204ENST00000493348 C3orf22Q8N5N4 141 aa4.8□□□□□ -1.64
TM4SF1-204ENST00000493348 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
TM4SF1-204ENST00000493348 HERC1Q15751 4861 aa4.8□□□□□ -1.64
TM4SF1-204ENST00000493348 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
TM4SF1-204ENST00000493348 LINC00575Q6W349 94 aa4.79□□□□□ -1.64
TM4SF1-204ENST00000493348 SSBP3-AS1Q7Z2R9 100 aa4.79□□□□□ -1.64
TM4SF1-204ENST00000493348 LOC105371267A0A1B0GV96 52 aa4.78□□□□□ -1.64
TM4SF1-204ENST00000493348 Q8NBF4 154 aa4.78□□□□□ -1.64
TM4SF1-204ENST00000493348 DNAL4O96015 105 aa4.77□□□□□ -1.65
TM4SF1-204ENST00000493348 SCGB1C2P0DMR2 95 aa4.77□□□□□ -1.65
TM4SF1-204ENST00000493348 CTAG1AP78358 180 aa4.77□□□□□ -1.65
TM4SF1-204ENST00000493348 OCIAD2Q56VL3 154 aa4.77□□□□□ -1.65
TM4SF1-204ENST00000493348 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.77□□□□□ -1.65
TM4SF1-204ENST00000493348 Q6ZQY7 126 aa4.77□□□□□ -1.65
TM4SF1-204ENST00000493348 K7ERJ3 54 aa4.76□□□□□ -1.65
TM4SF1-204ENST00000493348 SPRR1BP22528 89 aa4.76□□□□□ -1.65
TM4SF1-204ENST00000493348 PRR4Q16378 134 aa4.76□□□□□ -1.65
TM4SF1-204ENST00000493348 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
TM4SF1-204ENST00000493348 A0A1B0GX51 115 aa4.75□□□□□ -1.65
TM4SF1-204ENST00000493348 H3BS24 57 aa4.75□□□□□ -1.65
TM4SF1-204ENST00000493348 SPINK1P00995 79 aa4.75□□□□□ -1.65
TM4SF1-204ENST00000493348 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
TM4SF1-204ENST00000493348 PPDPFLQ8WWR9 84 aa4.75□□□□□ -1.65
TM4SF1-204ENST00000493348 IGLV5-48A0A075B6I7 105 aa4.74□□□□□ -1.65
TM4SF1-204ENST00000493348 TRIAP1O43715 76 aa4.74□□□□□ -1.65
TM4SF1-204ENST00000493348 BATFQ16520 125 aa4.74□□□□□ -1.65
TM4SF1-204ENST00000493348 H3BQ85 93 aa4.73□□□□□ -1.65
TM4SF1-204ENST00000493348 LIMD2Q9BT23 127 aa4.73□□□□□ -1.65
TM4SF1-204ENST00000493348 FABP2P12104 132 aa4.72□□□□□ -1.65
TM4SF1-204ENST00000493348 LYRM7Q5U5X0 104 aa4.72□□□□□ -1.65
TM4SF1-204ENST00000493348 HRCT1Q6UXD1 115 aa4.72□□□□□ -1.65
TM4SF1-204ENST00000493348 Q8N377 158 aa4.72□□□□□ -1.65
TM4SF1-204ENST00000493348 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
TM4SF1-204ENST00000493348 LINC01547P58512 204 aaPredicted RBP4.71□□□□□ -1.66
TM4SF1-204ENST00000493348 Q6JHZ5 121 aa4.71□□□□□ -1.66
TM4SF1-204ENST00000493348 CLEC2BQ92478 149 aa4.71□□□□□ -1.66
TM4SF1-204ENST00000493348 ORMDL1Q9P0S3 153 aa4.71□□□□□ -1.66
TM4SF1-204ENST00000493348 RPS29P62273 56 aaKnown RBP4.7□□□□□ -1.66
TM4SF1-204ENST00000493348 CD164Q04900 197 aa4.69□□□□□ -1.66
TM4SF1-204ENST00000493348 FAM218AQ96MZ4 157 aa4.69□□□□□ -1.66
TM4SF1-204ENST00000493348 RETNLBQ9BQ08 111 aa4.69□□□□□ -1.66
TM4SF1-204ENST00000493348 TMEM256-PLSCR3K7ERE1 68 aa4.68□□□□□ -1.66
TM4SF1-204ENST00000493348 TCL1BO95988 128 aa4.68□□□□□ -1.66
TM4SF1-204ENST00000493348 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
TM4SF1-204ENST00000493348 SMIM29Q86T20 159 aa4.68□□□□□ -1.66
TM4SF1-204ENST00000493348 TRACP01848 142 aa4.67□□□□□ -1.66
TM4SF1-204ENST00000493348 NDUFV3P56181 108 aaKnown RBP4.67□□□□□ -1.66
TM4SF1-204ENST00000493348 FP248Q71RG6 208 aaPredicted RBP4.67□□□□□ -1.66
TM4SF1-204ENST00000493348 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
TM4SF1-204ENST00000493348 IGLV7-46A0A075B6I9 117 aa4.66□□□□□ -1.66
TM4SF1-204ENST00000493348 H3BMG7 143 aa4.66□□□□□ -1.66
TM4SF1-204ENST00000493348 LST1O00453 97 aa4.66□□□□□ -1.66
TM4SF1-204ENST00000493348 H3BUT2 72 aa4.65□□□□□ -1.67
TM4SF1-204ENST00000493348 NAA38Q9BRA0 125 aaKnown RBP4.65□□□□□ -1.67
TM4SF1-204ENST00000493348 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
TM4SF1-204ENST00000493348 TRBV20-1A0A075B6N2 111 aa4.64□□□□□ -1.67
TM4SF1-204ENST00000493348 IGFL1Q6UW32 110 aa4.64□□□□□ -1.67
TM4SF1-204ENST00000493348 CDIP1Q9H305 208 aa4.64□□□□□ -1.67
TM4SF1-204ENST00000493348 A0A1B0GV72 72 aa4.63□□□□□ -1.67
TM4SF1-204ENST00000493348 ANKRD29Q8N6D5 301 aa4.63□□□□□ -1.67
TM4SF1-204ENST00000493348 SS18L2Q9UHA2 77 aa4.63□□□□□ -1.67
TM4SF1-204ENST00000493348 A0A0G2JQZ4 141 aa4.62□□□□□ -1.67
TM4SF1-204ENST00000493348 C9orf118A6NHY6 69 aa4.62□□□□□ -1.67
TM4SF1-204ENST00000493348 PCP4L1A6NKN8 68 aa4.62□□□□□ -1.67
TM4SF1-204ENST00000493348 BAALC-AS2P0C853 105 aa4.62□□□□□ -1.67
TM4SF1-204ENST00000493348 UBE2V1Q13404 147 aa4.62□□□□□ -1.67
TM4SF1-204ENST00000493348 COL5A1-AS1Q5SY13 56 aa4.62□□□□□ -1.67
TM4SF1-204ENST00000493348 TEN1Q86WV5 123 aa4.62□□□□□ -1.67
TM4SF1-204ENST00000493348 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
TM4SF1-204ENST00000493348 RBM3P98179 157 aaKnown RBP4.61□□□□□ -1.67
TM4SF1-204ENST00000493348 DSCR8Q96T75 97 aa4.61□□□□□ -1.67
TM4SF1-204ENST00000493348 C21orf62-AS1Q17RA5 79 aa4.6□□□□□ -1.67
TM4SF1-204ENST00000493348 TPRXLQ17RH7 258 aa4.6□□□□□ -1.67
TM4SF1-204ENST00000493348 Q5XG85 94 aa4.6□□□□□ -1.67
TM4SF1-204ENST00000493348 VPS25Q9BRG1 176 aa4.6□□□□□ -1.67
TM4SF1-204ENST00000493348 A0A1W2PPM0 123 aa4.59□□□□□ -1.67
TM4SF1-204ENST00000493348 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
TM4SF1-204ENST00000493348 JMJD7-PLA2G4BH0Y9G9 81 aa4.59□□□□□ -1.67
TM4SF1-204ENST00000493348 TAX1BP3O14907 124 aa4.59□□□□□ -1.67
TM4SF1-204ENST00000493348 C9JAW5 83 aa4.58□□□□□ -1.68
TM4SF1-204ENST00000493348 Q6Q795 121 aa4.58□□□□□ -1.68
TM4SF1-204ENST00000493348 LRP2P98164 4655 aa4.58□□□□□ -1.68
TM4SF1-204ENST00000493348 LPAP08519 4548 aa4.57□□□□□ -1.68
TM4SF1-204ENST00000493348 A0A087WSZ3 146 aa4.57□□□□□ -1.68
TM4SF1-204ENST00000493348 CCKP06307 115 aa4.57□□□□□ -1.68
TM4SF1-204ENST00000493348 TRBV7-4A0A0J9YYF1 115 aa4.56□□□□□ -1.68
TM4SF1-204ENST00000493348 PDE6GP18545 87 aa4.56□□□□□ -1.68
TM4SF1-204ENST00000493348 ASB16-AS1Q495Z4 193 aa4.56□□□□□ -1.68
TM4SF1-204ENST00000493348 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
TM4SF1-204ENST00000493348 C1orf195Q5TG92 126 aa4.56□□□□□ -1.68
TM4SF1-204ENST00000493348 SPCS1Q9Y6A9 102 aa4.56□□□□□ -1.68
TM4SF1-204ENST00000493348 H3BT86 120 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms