RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 SMIM29Q86T20 159 aa13.54□□□□□ -0.24
SCN5A-213ENST00000491944 SSBP3-AS1Q7Z2R9 100 aa13.53□□□□□ -0.24
SCN5A-213ENST00000491944 OCIAD2Q56VL3 154 aa13.51□□□□□ -0.25
SCN5A-213ENST00000491944 PCP4L1A6NKN8 68 aa13.5□□□□□ -0.25
SCN5A-213ENST00000491944 DNAL4O96015 105 aa13.5□□□□□ -0.25
SCN5A-213ENST00000491944 C4orf48Q5BLP8 95 aa13.49□□□□□ -0.25
SCN5A-213ENST00000491944 PPDPFLQ8WWR9 84 aa13.49□□□□□ -0.25
SCN5A-213ENST00000491944 F8WEM9 126 aa13.48□□□□□ -0.25
SCN5A-213ENST00000491944 SNHG12Q9BXW3 62 aa13.48□□□□□ -0.25
SCN5A-213ENST00000491944 SPAG11AQ6PDA7 123 aa13.46□□□□□ -0.25
SCN5A-213ENST00000491944 HERC1Q15751 4861 aa13.45□□□□□ -0.26
SCN5A-213ENST00000491944 H3BUT2 72 aa13.45□□□□□ -0.26
SCN5A-213ENST00000491944 LST1O00453 97 aa13.45□□□□□ -0.26
SCN5A-213ENST00000491944 GHRHP01286 108 aa13.44□□□□□ -0.26
SCN5A-213ENST00000491944 TAX1BP3O14907 124 aa13.43□□□□□ -0.26
SCN5A-213ENST00000491944 TRACP01848 142 aa13.43□□□□□ -0.26
SCN5A-213ENST00000491944 ORMDL1Q9P0S3 153 aa13.43□□□□□ -0.26
SCN5A-213ENST00000491944 FABP2P12104 132 aa13.42□□□□□ -0.26
SCN5A-213ENST00000491944 LYRM7Q5U5X0 104 aa13.42□□□□□ -0.26
SCN5A-213ENST00000491944 C9orf118A6NHY6 69 aa13.41□□□□□ -0.26
SCN5A-213ENST00000491944 TCL1BO95988 128 aa13.39□□□□□ -0.27
SCN5A-213ENST00000491944 SPINK1P00995 79 aa13.39□□□□□ -0.27
SCN5A-213ENST00000491944 ATXN8Q156A1 80 aa13.39□□□□□ -0.27
SCN5A-213ENST00000491944 NDUFV3P56181 108 aaKnown RBP13.37□□□□□ -0.27
SCN5A-213ENST00000491944 COL5A1-AS1Q5SY13 56 aa13.37□□□□□ -0.27
SCN5A-213ENST00000491944 HRCT1Q6UXD1 115 aa13.37□□□□□ -0.27
SCN5A-213ENST00000491944 A0A0G2JQZ4 141 aa13.36□□□□□ -0.27
SCN5A-213ENST00000491944 H3BQ85 93 aa13.36□□□□□ -0.27
SCN5A-213ENST00000491944 IGLV8-61A0A075B6I0 122 aa13.34□□□□□ -0.27
SCN5A-213ENST00000491944 TMEM256-PLSCR3K7ERE1 68 aa13.33□□□□□ -0.27
SCN5A-213ENST00000491944 Q6JHZ5 121 aa13.33□□□□□ -0.27
SCN5A-213ENST00000491944 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
SCN5A-213ENST00000491944 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
SCN5A-213ENST00000491944 H3BMG7 143 aa13.3□□□□□ -0.28
SCN5A-213ENST00000491944 RPS29P62273 56 aaKnown RBP13.3□□□□□ -0.28
SCN5A-213ENST00000491944 CD164Q04900 197 aa13.3□□□□□ -0.28
SCN5A-213ENST00000491944 IGFL1Q6UW32 110 aa13.3□□□□□ -0.28
SCN5A-213ENST00000491944 RETNLBQ9BQ08 111 aa13.3□□□□□ -0.28
SCN5A-213ENST00000491944 BAALC-AS2P0C853 105 aa13.28□□□□□ -0.28
SCN5A-213ENST00000491944 PRR4Q16378 134 aa13.28□□□□□ -0.28
SCN5A-213ENST00000491944 A0A1B0GV72 72 aa13.27□□□□□ -0.29
SCN5A-213ENST00000491944 UBE2V1Q13404 147 aa13.26□□□□□ -0.29
SCN5A-213ENST00000491944 LIMD2Q9BT23 127 aa13.25□□□□□ -0.29
SCN5A-213ENST00000491944 C9JAW5 83 aa13.22□□□□□ -0.29
SCN5A-213ENST00000491944 ANKRD29Q8N6D5 301 aa13.22□□□□□ -0.29
SCN5A-213ENST00000491944 SPCS1Q9Y6A9 102 aa13.2□□□□□ -0.3
SCN5A-213ENST00000491944 TRBV7-7A0A0K0K1E9 115 aa13.16□□□□□ -0.3
SCN5A-213ENST00000491944 RBM3P98179 157 aaKnown RBP13.13□□□□□ -0.31
SCN5A-213ENST00000491944 Q5XG85 94 aa13.13□□□□□ -0.31
SCN5A-213ENST00000491944 TEN1Q86WV5 123 aa13.13□□□□□ -0.31
SCN5A-213ENST00000491944 MTURNQ8N3F0 131 aa13.13□□□□□ -0.31
SCN5A-213ENST00000491944 IGLV7-46A0A075B6I9 117 aa13.12□□□□□ -0.31
SCN5A-213ENST00000491944 FP248Q71RG6 208 aaPredicted RBP13.12□□□□□ -0.31
SCN5A-213ENST00000491944 Q6Q795 121 aa13.11□□□□□ -0.31
SCN5A-213ENST00000491944 HMCN2Q8NDA2 5059 aa13.09□□□□□ -0.31
SCN5A-213ENST00000491944 DSCR8Q96T75 97 aa13.09□□□□□ -0.31
SCN5A-213ENST00000491944 A0A1W2PNM2 257 aa13.08□□□□□ -0.31
SCN5A-213ENST00000491944 H3BT86 120 aa13.08□□□□□ -0.31
SCN5A-213ENST00000491944 TRBV7-4A0A0J9YYF1 115 aa13.07□□□□□ -0.32
SCN5A-213ENST00000491944 K7EP34 96 aa13.07□□□□□ -0.32
SCN5A-213ENST00000491944 JMJD7-PLA2G4BH0Y9G9 81 aa13.07□□□□□ -0.32
SCN5A-213ENST00000491944 CCKP06307 115 aa13.06□□□□□ -0.32
SCN5A-213ENST00000491944 A0A087WSZ3 146 aa13.04□□□□□ -0.32
SCN5A-213ENST00000491944 C1orf195Q5TG92 126 aa13.04□□□□□ -0.32
SCN5A-213ENST00000491944 VPS25Q9BRG1 176 aa13.04□□□□□ -0.32
SCN5A-213ENST00000491944 SS18L2Q9UHA2 77 aa13.03□□□□□ -0.32
SCN5A-213ENST00000491944 GTF2H5Q6ZYL4 71 aa13.02□□□□□ -0.33
SCN5A-213ENST00000491944 ASB16-AS1Q495Z4 193 aa13.01□□□□□ -0.33
SCN5A-213ENST00000491944 C14orf132Q9NPU4 83 aa12.99□□□□□ -0.33
SCN5A-213ENST00000491944 TPRXLQ17RH7 258 aa12.98□□□□□ -0.33
SCN5A-213ENST00000491944 OBSCN-AS1Q96MR7 158 aa12.98□□□□□ -0.33
SCN5A-213ENST00000491944 LOC110117498A0A087WWA1 95 aa12.96□□□□□ -0.33
SCN5A-213ENST00000491944 SMCPP49901 116 aaPredicted RBP12.95□□□□□ -0.34
SCN5A-213ENST00000491944 Q6ZQT0 140 aa12.95□□□□□ -0.34
SCN5A-213ENST00000491944 PRO0461Q9UI25 63 aa12.94□□□□□ -0.34
SCN5A-213ENST00000491944 PDE6GP18545 87 aa12.94□□□□□ -0.34
SCN5A-213ENST00000491944 KRTAP13-3Q3SY46 172 aa12.93□□□□□ -0.34
SCN5A-213ENST00000491944 CDIP1Q9H305 208 aa12.93□□□□□ -0.34
SCN5A-213ENST00000491944 LPAP08519 4548 aa12.91□□□□□ -0.34
SCN5A-213ENST00000491944 LRP2P98164 4655 aa12.89□□□□□ -0.35
SCN5A-213ENST00000491944 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
SCN5A-213ENST00000491944 Q96NJ1 140 aa12.84□□□□□ -0.35
SCN5A-213ENST00000491944 C9orf92A6NGG3 77 aa12.83□□□□□ -0.36
SCN5A-213ENST00000491944 F8W1H4 67 aa12.83□□□□□ -0.36
SCN5A-213ENST00000491944 A0A1B0GW54 56 aa12.81□□□□□ -0.36
SCN5A-213ENST00000491944 SIGMAR1Q99720 223 aa12.8□□□□□ -0.36
SCN5A-213ENST00000491944 DEFB116Q30KQ4 102 aa12.78□□□□□ -0.36
SCN5A-213ENST00000491944 LINC00472Q9H8W2 130 aa12.78□□□□□ -0.36
SCN5A-213ENST00000491944 A0A1B0GV90 55 aa12.77□□□□□ -0.37
SCN5A-213ENST00000491944 IGKV4-1P06312 121 aa12.77□□□□□ -0.37
SCN5A-213ENST00000491944 ETDBQ3ZM63 59 aa12.73□□□□□ -0.37
SCN5A-213ENST00000491944 XP32Q5T750 250 aa12.73□□□□□ -0.37
SCN5A-213ENST00000491944 NREPQ16612 68 aa12.69□□□□□ -0.38
SCN5A-213ENST00000491944 J3KT08 172 aa12.66□□□□□ -0.38
SCN5A-213ENST00000491944 UBR4Q5T4S7 5183 aa12.62□□□□□ -0.39
SCN5A-213ENST00000491944 DSCR10P59022 87 aa12.61□□□□□ -0.39
SCN5A-213ENST00000491944 IGHV6-1A0A0B4J1U7 121 aa12.6□□□□□ -0.39
SCN5A-213ENST00000491944 SEC61BP60468 96 aaKnown RBP12.59□□□□□ -0.39
SCN5A-213ENST00000491944 A0A1B0GVX0 72 aa12.57□□□□□ -0.4
SCN5A-213ENST00000491944 LINC00313P59037 77 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms