RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 UBE2BP63146 152 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 SCXQ7RTU7 201 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 MRPL55Q7Z7F7 128 aaKnown RBP1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 SPANXA2-OT1Q8N9U9 137 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 C1orf64Q8NEQ6 169 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 Q9BRP9 147 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 KRTAP4-3Q9BYR4 195 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 TP53AIP1Q9HCN2 124 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 LINC00474Q9P2X8 69 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 PKIGQ9Y2B9 76 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 LINC00588Q9Y4M8 146 aa1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 USP9YO00507 2555 aaPredicted RBP1.27□□□□□ -2.21
SNRNP40-207ENST00000491106 NF1P21359 2839 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 DOPEY1Q5JWR5 2465 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 FN1P02751 2386 aaKnown RBP1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 C16orf90A8MZG2 172 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 C3orf84H3BNL1 204 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 SPRR1BP22528 89 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 KRTAP10-8P60410 259 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 PMAIP1Q13794 54 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 C1orf195Q5TG92 126 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 IGFL1Q6UW32 110 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 PRR15Q8IV56 129 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 LINC00208Q96KT6 92 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 SMR3AQ99954 134 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 B9D2Q9BPU9 175 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 LINC00472Q9H8W2 130 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 PDZD2O15018 2839 aa1.26□□□□□ -2.21
SNRNP40-207ENST00000491106 RELNP78509 3460 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 OBSCNQ5VST9 7968 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 TLN2Q9Y4G6 2542 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 LRCOL1A6NCL2 159 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 A8MWP4 228 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 PSCAO43653 123 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 UBE2AP49459 152 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 CNBPP62633 177 aaKnown RBP1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 CASC2Q6XLA1 102 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 ATP11AUNQ6ZP68 121 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 Q8N9L7 120 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 C9orf163Q8N9P6 203 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 ST20-AS1Q8NBB2 130 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 BRK1Q8WUW1 75 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 NBEAL2Q6ZNJ1 2754 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 ITPR3Q14573 2671 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
SNRNP40-207ENST00000491106 CFAP46Q8IYW2 2715 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 A0A087WSZ3 146 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 TRAV22A0A0B4J277 110 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 LOC101927531A0A1B0GV80 90 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 A0A1W2PNN7 141 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 K7EQZ3 153 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 FAM229BQ4G0N7 80 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 ANAPC11Q9NYG5 84 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 SVEP1Q4LDE5 3571 aa1.24□□□□□ -2.21
SNRNP40-207ENST00000491106 IGF2RP11717 2491 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 FLNCQ14315 2725 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 H0Y9P7 68 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 NDUFS5O43920 106 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 ACYP2P14621 99 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 SEC61GP60059 68 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 DEFB116Q30KQ4 102 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 ASB16-AS1Q495Z4 193 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 SSBP3-AS1Q7Z2R9 100 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 WFDC13Q8IUB5 93 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 SETXQ7Z333 2677 aaKnown RBP1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 IGSF10Q6WRI0 2623 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 LRRK2Q5S007 2527 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 ACACBO00763 2458 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 VPS13CQ709C8 3753 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 FAM208BQ5VWN6 2430 aa1.23□□□□□ -2.21
SNRNP40-207ENST00000491106 TENM2Q9NT68 2774 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 MYO9AB2RTY4 2548 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 NAV2Q8IVL1 2488 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 A0A096LNI7 61 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 A8MUN3 132 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 CHKB-CPT1BH3BT56 60 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 PSPHP1O15172 72 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 CD164Q04900 197 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 CASC10Q5T4H9 136 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 PHF5AQ7RTV0 110 aaKnown RBP1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 RETNQ9HD89 108 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 APLNQ9ULZ1 77 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 ZNF706Q9Y5V0 76 aaPredicted RBP1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 LINC01558Q9Y6Z2 57 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 ABCA12Q86UK0 2595 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 CHD8Q9HCK8 2581 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 UBR5O95071 2799 aaPredicted RBP1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 ZFYVE26Q68DK2 2539 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 CENPEQ02224 2701 aa1.22□□□□□ -2.21
SNRNP40-207ENST00000491106 CSMD2Q7Z408 3487 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 PKD1L2Q7Z442 2459 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 IGKV2-24A0A0C4DH68 120 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 A0A0G2JQZ4 141 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 ZNF861PO60384 105 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 PRLHP81277 87 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 LINC00483Q53H64 154 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 Q5VV11 94 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 MRPL34Q9BQ48 92 aaKnown RBP1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 C8orf17Q9NRJ1 99 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms