RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 A0A1B0GX51 115 aa6.31□□□□□ -1.4
CACNA1C-227ENST00000491104 LST1O00453 97 aa6.31□□□□□ -1.4
CACNA1C-227ENST00000491104 COL5A1-AS1Q5SY13 56 aa6.31□□□□□ -1.4
CACNA1C-227ENST00000491104 C9orf153Q5TBE3 101 aa6.31□□□□□ -1.4
CACNA1C-227ENST00000491104 SMIM29Q86T20 159 aa6.31□□□□□ -1.4
CACNA1C-227ENST00000491104 LAMTOR3Q9UHA4 124 aa6.31□□□□□ -1.4
CACNA1C-227ENST00000491104 SNCGO76070 127 aa6.3□□□□□ -1.4
CACNA1C-227ENST00000491104 DNAL4O96015 105 aa6.3□□□□□ -1.4
CACNA1C-227ENST00000491104 Q8NBF4 154 aa6.29□□□□□ -1.4
CACNA1C-227ENST00000491104 A0A1W2PPM0 123 aa6.28□□□□□ -1.4
CACNA1C-227ENST00000491104 TRACP01848 142 aa6.28□□□□□ -1.4
CACNA1C-227ENST00000491104 ATXN8Q156A1 80 aa6.27□□□□□ -1.41
CACNA1C-227ENST00000491104 LYRM7Q5U5X0 104 aa6.27□□□□□ -1.41
CACNA1C-227ENST00000491104 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
CACNA1C-227ENST00000491104 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
CACNA1C-227ENST00000491104 A0A0G2JQZ4 141 aa6.26□□□□□ -1.41
CACNA1C-227ENST00000491104 FABP2P12104 132 aa6.26□□□□□ -1.41
CACNA1C-227ENST00000491104 OCIAD2Q56VL3 154 aa6.26□□□□□ -1.41
CACNA1C-227ENST00000491104 LINC00304Q8N9R0 145 aa6.26□□□□□ -1.41
CACNA1C-227ENST00000491104 A0A1B0GV72 72 aa6.25□□□□□ -1.41
CACNA1C-227ENST00000491104 F8WEM9 126 aa6.25□□□□□ -1.41
CACNA1C-227ENST00000491104 PPDPFLQ8WWR9 84 aa6.25□□□□□ -1.41
CACNA1C-227ENST00000491104 NDUFV3P56181 108 aaKnown RBP6.24□□□□□ -1.41
CACNA1C-227ENST00000491104 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
CACNA1C-227ENST00000491104 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
CACNA1C-227ENST00000491104 HRCT1Q6UXD1 115 aa6.23□□□□□ -1.41
CACNA1C-227ENST00000491104 MTURNQ8N3F0 131 aa6.23□□□□□ -1.41
CACNA1C-227ENST00000491104 SPCS1Q9Y6A9 102 aa6.23□□□□□ -1.41
CACNA1C-227ENST00000491104 C9JAW5 83 aa6.21□□□□□ -1.42
CACNA1C-227ENST00000491104 H3BMG7 143 aa6.21□□□□□ -1.42
CACNA1C-227ENST00000491104 TMEM256-PLSCR3K7ERE1 68 aa6.21□□□□□ -1.42
CACNA1C-227ENST00000491104 GHRHP01286 108 aa6.21□□□□□ -1.42
CACNA1C-227ENST00000491104 BAALC-AS2P0C853 105 aa6.21□□□□□ -1.42
CACNA1C-227ENST00000491104 IGLV8-61A0A075B6I0 122 aa6.2□□□□□ -1.42
CACNA1C-227ENST00000491104 C4orf48Q5BLP8 95 aa6.2□□□□□ -1.42
CACNA1C-227ENST00000491104 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
CACNA1C-227ENST00000491104 K7EP34 96 aa6.19□□□□□ -1.42
CACNA1C-227ENST00000491104 H3BQ85 93 aa6.18□□□□□ -1.42
CACNA1C-227ENST00000491104 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
CACNA1C-227ENST00000491104 SPAG11AQ6PDA7 123 aa6.18□□□□□ -1.42
CACNA1C-227ENST00000491104 ANKRD29Q8N6D5 301 aa6.18□□□□□ -1.42
CACNA1C-227ENST00000491104 Q6JHZ5 121 aa6.17□□□□□ -1.42
CACNA1C-227ENST00000491104 RETNLBQ9BQ08 111 aa6.17□□□□□ -1.42
CACNA1C-227ENST00000491104 SPINK1P00995 79 aa6.16□□□□□ -1.42
CACNA1C-227ENST00000491104 H3BT86 120 aa6.14□□□□□ -1.43
CACNA1C-227ENST00000491104 SMCPP49901 116 aaPredicted RBP6.14□□□□□ -1.43
CACNA1C-227ENST00000491104 CD164Q04900 197 aa6.14□□□□□ -1.43
CACNA1C-227ENST00000491104 RBM3P98179 157 aaKnown RBP6.13□□□□□ -1.43
CACNA1C-227ENST00000491104 PRO0461Q9UI25 63 aa6.13□□□□□ -1.43
CACNA1C-227ENST00000491104 HMCN2Q8NDA2 5059 aa6.12□□□□□ -1.43
CACNA1C-227ENST00000491104 TRBV7-4A0A0J9YYF1 115 aa6.12□□□□□ -1.43
CACNA1C-227ENST00000491104 TRBV7-7A0A0K0K1E9 115 aa6.12□□□□□ -1.43
CACNA1C-227ENST00000491104 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
CACNA1C-227ENST00000491104 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
CACNA1C-227ENST00000491104 GTF2H5Q6ZYL4 71 aa6.12□□□□□ -1.43
CACNA1C-227ENST00000491104 A0A1B0GV90 55 aa6.11□□□□□ -1.43
CACNA1C-227ENST00000491104 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
CACNA1C-227ENST00000491104 PRR4Q16378 134 aa6.1□□□□□ -1.43
CACNA1C-227ENST00000491104 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
CACNA1C-227ENST00000491104 VPS25Q9BRG1 176 aa6.1□□□□□ -1.43
CACNA1C-227ENST00000491104 C14orf132Q9NPU4 83 aa6.1□□□□□ -1.43
CACNA1C-227ENST00000491104 JMJD7-PLA2G4BH0Y9G9 81 aa6.09□□□□□ -1.43
CACNA1C-227ENST00000491104 CCKP06307 115 aa6.09□□□□□ -1.43
CACNA1C-227ENST00000491104 Q6Q795 121 aa6.09□□□□□ -1.43
CACNA1C-227ENST00000491104 TEN1Q86WV5 123 aa6.09□□□□□ -1.43
CACNA1C-227ENST00000491104 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
CACNA1C-227ENST00000491104 A0A087WSZ3 146 aa6.08□□□□□ -1.44
CACNA1C-227ENST00000491104 OBSCN-AS1Q96MR7 158 aa6.08□□□□□ -1.44
CACNA1C-227ENST00000491104 Q6ZQT0 140 aa6.07□□□□□ -1.44
CACNA1C-227ENST00000491104 LOC110117498A0A087WWA1 95 aa6.06□□□□□ -1.44
CACNA1C-227ENST00000491104 Q5XG85 94 aa6.06□□□□□ -1.44
CACNA1C-227ENST00000491104 IGLV7-46A0A075B6I9 117 aa6.04□□□□□ -1.44
CACNA1C-227ENST00000491104 F8W1H4 67 aa6.04□□□□□ -1.44
CACNA1C-227ENST00000491104 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
CACNA1C-227ENST00000491104 LPAP08519 4548 aa6.04□□□□□ -1.44
CACNA1C-227ENST00000491104 ETDBQ3ZM63 59 aa6.02□□□□□ -1.45
CACNA1C-227ENST00000491104 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
CACNA1C-227ENST00000491104 SS18L2Q9UHA2 77 aa6.02□□□□□ -1.45
CACNA1C-227ENST00000491104 PDE6GP18545 87 aa6.01□□□□□ -1.45
CACNA1C-227ENST00000491104 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
CACNA1C-227ENST00000491104 Q96NJ1 140 aa6□□□□□ -1.45
CACNA1C-227ENST00000491104 DEFB116Q30KQ4 102 aa5.98□□□□□ -1.45
CACNA1C-227ENST00000491104 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
CACNA1C-227ENST00000491104 LRP2P98164 4655 aa5.96□□□□□ -1.45
CACNA1C-227ENST00000491104 C9orf92A6NGG3 77 aa5.96□□□□□ -1.46
CACNA1C-227ENST00000491104 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
CACNA1C-227ENST00000491104 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
CACNA1C-227ENST00000491104 SIGMAR1Q99720 223 aa5.95□□□□□ -1.46
CACNA1C-227ENST00000491104 IGKV4-1P06312 121 aa5.94□□□□□ -1.46
CACNA1C-227ENST00000491104 C21orf62-AS1Q17RA5 79 aa5.94□□□□□ -1.46
CACNA1C-227ENST00000491104 A0A1B0GW54 56 aa5.93□□□□□ -1.46
CACNA1C-227ENST00000491104 CDIP1Q9H305 208 aa5.92□□□□□ -1.46
CACNA1C-227ENST00000491104 NREPQ16612 68 aa5.91□□□□□ -1.46
CACNA1C-227ENST00000491104 LINC00846Q9NV44 126 aa5.9□□□□□ -1.46
CACNA1C-227ENST00000491104 XP32Q5T750 250 aa5.89□□□□□ -1.47
CACNA1C-227ENST00000491104 Q6ZVQ6 151 aa5.89□□□□□ -1.47
CACNA1C-227ENST00000491104 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
CACNA1C-227ENST00000491104 DSCR10P59022 87 aa5.88□□□□□ -1.47
CACNA1C-227ENST00000491104 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
CACNA1C-227ENST00000491104 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms