RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CHTF8P0CG12 524 aa7.15□□□□□ -1.27
CRNKL1-204ENST00000490910 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
CRNKL1-204ENST00000490910 SPINK7P58062 85 aa7.14□□□□□ -1.27
CRNKL1-204ENST00000490910 LINC01554Q52M75 96 aa7.14□□□□□ -1.27
CRNKL1-204ENST00000490910 ITPR3Q14573 2671 aa7.14□□□□□ -1.27
CRNKL1-204ENST00000490910 IGLV8-61A0A075B6I0 122 aa7.13□□□□□ -1.27
CRNKL1-204ENST00000490910 LINC00313P59037 77 aa7.13□□□□□ -1.27
CRNKL1-204ENST00000490910 IGKV2D-30A0A075B6S6 120 aa7.12□□□□□ -1.27
CRNKL1-204ENST00000490910 H3BS24 57 aa7.12□□□□□ -1.27
CRNKL1-204ENST00000490910 IGKV2-30P06310 120 aa7.12□□□□□ -1.27
CRNKL1-204ENST00000490910 ASH1LQ9NR48 2969 aaKnown RBP7.12□□□□□ -1.27
CRNKL1-204ENST00000490910 CASC10Q5T4H9 136 aa7.12□□□□□ -1.27
CRNKL1-204ENST00000490910 ATRQ13535 2644 aa7.11□□□□□ -1.27
CRNKL1-204ENST00000490910 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
CRNKL1-204ENST00000490910 TEX15Q9BXT5 2789 aa7.1□□□□□ -1.27
CRNKL1-204ENST00000490910 A6NN06 94 aa7.09□□□□□ -1.27
CRNKL1-204ENST00000490910 KRTAP10-3P60369 221 aa7.09□□□□□ -1.27
CRNKL1-204ENST00000490910 HRES1P13985 223 aa7.09□□□□□ -1.27
CRNKL1-204ENST00000490910 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
CRNKL1-204ENST00000490910 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
CRNKL1-204ENST00000490910 C9orf163Q8N9P6 203 aa7.07□□□□□ -1.28
CRNKL1-204ENST00000490910 HRNRQ86YZ3 2850 aaPredicted RBP7.07□□□□□ -1.28
CRNKL1-204ENST00000490910 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
CRNKL1-204ENST00000490910 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
CRNKL1-204ENST00000490910 FASNP49327 2511 aaKnown RBP7.07□□□□□ -1.28
CRNKL1-204ENST00000490910 KRTAP4-16G5E9R7 235 aaPredicted RBP7.05□□□□□ -1.28
CRNKL1-204ENST00000490910 KRTAP1-3Q8IUG1 177 aa7.02□□□□□ -1.29
CRNKL1-204ENST00000490910 ZFHX4Q86UP3 3567 aa7.01□□□□□ -1.29
CRNKL1-204ENST00000490910 COL12A1Q99715 3063 aa7□□□□□ -1.29
CRNKL1-204ENST00000490910 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
CRNKL1-204ENST00000490910 SETXQ7Z333 2677 aaKnown RBP6.98□□□□□ -1.29
CRNKL1-204ENST00000490910 CSMD1Q96PZ7 3565 aa6.97□□□□□ -1.29
CRNKL1-204ENST00000490910 SPRR1BP22528 89 aa6.97□□□□□ -1.29
CRNKL1-204ENST00000490910 CFAP46Q8IYW2 2715 aa6.96□□□□□ -1.29
CRNKL1-204ENST00000490910 FLNCQ14315 2725 aa6.96□□□□□ -1.3
CRNKL1-204ENST00000490910 APCP25054 2843 aa6.95□□□□□ -1.3
CRNKL1-204ENST00000490910 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
CRNKL1-204ENST00000490910 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
CRNKL1-204ENST00000490910 UTP20O75691 2785 aaKnown RBP6.95□□□□□ -1.3
CRNKL1-204ENST00000490910 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
CRNKL1-204ENST00000490910 BAHCC1Q9P281 2608 aa6.94□□□□□ -1.3
CRNKL1-204ENST00000490910 ASPMQ8IZT6 3477 aa6.93□□□□□ -1.3
CRNKL1-204ENST00000490910 ANAPC11Q9NYG5 84 aa6.93□□□□□ -1.3
CRNKL1-204ENST00000490910 Q6ZR54 194 aa6.93□□□□□ -1.3
CRNKL1-204ENST00000490910 KRTAP10-11P60412 298 aa6.93□□□□□ -1.3
CRNKL1-204ENST00000490910 DCHS2Q6V1P9 2916 aa6.91□□□□□ -1.3
CRNKL1-204ENST00000490910 IGLV5-52A0A0A0MRZ9 124 aa6.91□□□□□ -1.3
CRNKL1-204ENST00000490910 NOTCH1P46531 2555 aa6.91□□□□□ -1.3
CRNKL1-204ENST00000490910 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.3
CRNKL1-204ENST00000490910 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
CRNKL1-204ENST00000490910 SMG1Q96Q15 3661 aaKnown RBP6.9□□□□□ -1.3
CRNKL1-204ENST00000490910 SSBP3-AS1Q7Z2R9 100 aa6.9□□□□□ -1.31
CRNKL1-204ENST00000490910 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
CRNKL1-204ENST00000490910 ZNF861PO60384 105 aa6.89□□□□□ -1.31
CRNKL1-204ENST00000490910 HECTD1Q9ULT8 2610 aa6.88□□□□□ -1.31
CRNKL1-204ENST00000490910 FBN2P35556 2912 aa6.88□□□□□ -1.31
CRNKL1-204ENST00000490910 C1orf134Q5TEV5 83 aa6.88□□□□□ -1.31
CRNKL1-204ENST00000490910 NBDYA0A0U1RRE5 68 aa6.87□□□□□ -1.31
CRNKL1-204ENST00000490910 NUPR2A6NF83 97 aa6.87□□□□□ -1.31
CRNKL1-204ENST00000490910 SPINT4Q6UDR6 99 aa6.87□□□□□ -1.31
CRNKL1-204ENST00000490910 MGAM2Q2M2H8 2515 aa6.87□□□□□ -1.31
CRNKL1-204ENST00000490910 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
CRNKL1-204ENST00000490910 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
CRNKL1-204ENST00000490910 RTL8CO15255 209 aa6.86□□□□□ -1.31
CRNKL1-204ENST00000490910 TEP1Q99973 2627 aaKnown RBP6.85□□□□□ -1.31
CRNKL1-204ENST00000490910 COL6A5A8TX70 2615 aa6.84□□□□□ -1.31
CRNKL1-204ENST00000490910 K7EIL1 84 aa6.84□□□□□ -1.31
CRNKL1-204ENST00000490910 KRTAP7-1Q8IUC3 87 aa6.84□□□□□ -1.31
CRNKL1-204ENST00000490910 PSORS1C2Q9UIG4 136 aa6.84□□□□□ -1.31
CRNKL1-204ENST00000490910 NF1P21359 2839 aa6.84□□□□□ -1.32
CRNKL1-204ENST00000490910 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
CRNKL1-204ENST00000490910 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
CRNKL1-204ENST00000490910 Q96NJ1 140 aa6.82□□□□□ -1.32
CRNKL1-204ENST00000490910 IGSF10Q6WRI0 2623 aa6.82□□□□□ -1.32
CRNKL1-204ENST00000490910 NBEAL1Q6ZS30 2694 aa6.82□□□□□ -1.32
CRNKL1-204ENST00000490910 MAST4O15021 2626 aa6.81□□□□□ -1.32
CRNKL1-204ENST00000490910 Q5W150 140 aa6.81□□□□□ -1.32
CRNKL1-204ENST00000490910 CELSR2Q9HCU4 2923 aa6.79□□□□□ -1.32
CRNKL1-204ENST00000490910 Q8N1X5 172 aa6.79□□□□□ -1.32
CRNKL1-204ENST00000490910 MXRA5Q9NR99 2828 aa6.78□□□□□ -1.32
CRNKL1-204ENST00000490910 RELNP78509 3460 aa6.78□□□□□ -1.32
CRNKL1-204ENST00000490910 KRTAP24-1Q3LI83 254 aa6.76□□□□□ -1.33
CRNKL1-204ENST00000490910 DMDP11532 3685 aa6.75□□□□□ -1.33
CRNKL1-204ENST00000490910 FLNBO75369 2602 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-204ENST00000490910 A0A087X002 238 aa6.74□□□□□ -1.33
CRNKL1-204ENST00000490910 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
CRNKL1-204ENST00000490910 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
CRNKL1-204ENST00000490910 LY6G6CO95867 125 aa6.74□□□□□ -1.33
CRNKL1-204ENST00000490910 WWC2-AS2Q96NR7 200 aa6.74□□□□□ -1.33
CRNKL1-204ENST00000490910 IGLV7-43P04211 117 aa6.74□□□□□ -1.33
CRNKL1-204ENST00000490910 CELSR1Q9NYQ6 3014 aa6.73□□□□□ -1.33
CRNKL1-204ENST00000490910 A0A1B0GU33 70 aa6.73□□□□□ -1.33
CRNKL1-204ENST00000490910 LAMA5O15230 3695 aa6.72□□□□□ -1.33
CRNKL1-204ENST00000490910 A0A087WTM6 91 aa6.72□□□□□ -1.33
CRNKL1-204ENST00000490910 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
CRNKL1-204ENST00000490910 KRTAP11-1Q8IUC1 163 aa6.71□□□□□ -1.34
CRNKL1-204ENST00000490910 PLAC8Q9NZF1 115 aa6.71□□□□□ -1.34
CRNKL1-204ENST00000490910 HIVEP1P15822 2718 aa6.7□□□□□ -1.34
CRNKL1-204ENST00000490910 SPENQ96T58 3664 aaKnown RBP6.7□□□□□ -1.34
CRNKL1-204ENST00000490910 TYMSOSQ8TAI1 123 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms