RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
ARHGEF39-205ENST00000490638 PCOTHQ58A44 107 aa9.22□□□□□ -0.93
ARHGEF39-205ENST00000490638 NDUFC1O43677 76 aa9.21□□□□□ -0.93
ARHGEF39-205ENST00000490638 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.93
ARHGEF39-205ENST00000490638 CXCL6P80162 114 aa9.2□□□□□ -0.94
ARHGEF39-205ENST00000490638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
ARHGEF39-205ENST00000490638 hDV103S1A0JD37 113 aa9.19□□□□□ -0.94
ARHGEF39-205ENST00000490638 H0Y9P7 68 aa9.19□□□□□ -0.94
ARHGEF39-205ENST00000490638 TRBV7-4A0A0J9YYF1 115 aa9.19□□□□□ -0.94
ARHGEF39-205ENST00000490638 LINC00313P59037 77 aa9.18□□□□□ -0.94
ARHGEF39-205ENST00000490638 KRTAP1-5Q9BYS1 174 aa9.18□□□□□ -0.94
ARHGEF39-205ENST00000490638 Q8N377 158 aa9.18□□□□□ -0.94
ARHGEF39-205ENST00000490638 LCE6AA0A183 80 aa9.18□□□□□ -0.94
ARHGEF39-205ENST00000490638 LOC110117498A0A087WWA1 95 aa9.17□□□□□ -0.94
ARHGEF39-205ENST00000490638 SPAG11AQ6PDA7 123 aa9.17□□□□□ -0.94
ARHGEF39-205ENST00000490638 ERC2-IT1O76042 136 aa9.17□□□□□ -0.94
ARHGEF39-205ENST00000490638 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
ARHGEF39-205ENST00000490638 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
ARHGEF39-205ENST00000490638 FLG2Q5D862 2391 aaPredicted RBP9.15□□□□□ -0.94
ARHGEF39-205ENST00000490638 IGFL1Q6UW32 110 aa9.15□□□□□ -0.94
ARHGEF39-205ENST00000490638 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
ARHGEF39-205ENST00000490638 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
ARHGEF39-205ENST00000490638 KRTAP21-3Q3LHN1 58 aa9.14□□□□□ -0.95
ARHGEF39-205ENST00000490638 Q96NJ1 140 aa9.13□□□□□ -0.95
ARHGEF39-205ENST00000490638 SPRR4Q96PI1 79 aa9.13□□□□□ -0.95
ARHGEF39-205ENST00000490638 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
ARHGEF39-205ENST00000490638 SPINK1P00995 79 aa9.13□□□□□ -0.95
ARHGEF39-205ENST00000490638 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
ARHGEF39-205ENST00000490638 SMIM29Q86T20 159 aa9.13□□□□□ -0.95
ARHGEF39-205ENST00000490638 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
ARHGEF39-205ENST00000490638 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
ARHGEF39-205ENST00000490638 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
ARHGEF39-205ENST00000490638 C1orf64Q8NEQ6 169 aa9.1□□□□□ -0.95
ARHGEF39-205ENST00000490638 TP53AIP1Q9HCN2 124 aa9.09□□□□□ -0.95
ARHGEF39-205ENST00000490638 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
ARHGEF39-205ENST00000490638 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
ARHGEF39-205ENST00000490638 RPS28P62857 69 aaKnown RBP9.08□□□□□ -0.96
ARHGEF39-205ENST00000490638 PKD1L1Q8TDX9 2849 aa9.07□□□□□ -0.96
ARHGEF39-205ENST00000490638 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
ARHGEF39-205ENST00000490638 A8MWP4 228 aa9.04□□□□□ -0.96
ARHGEF39-205ENST00000490638 TENM1Q9UKZ4 2725 aa9.04□□□□□ -0.96
ARHGEF39-205ENST00000490638 C4orf26Q17RF5 130 aa9.04□□□□□ -0.96
ARHGEF39-205ENST00000490638 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
ARHGEF39-205ENST00000490638 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
ARHGEF39-205ENST00000490638 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
ARHGEF39-205ENST00000490638 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
ARHGEF39-205ENST00000490638 K7ERS5 55 aa9.02□□□□□ -0.97
ARHGEF39-205ENST00000490638 PRR26Q8N8Z3 221 aa9.01□□□□□ -0.97
ARHGEF39-205ENST00000490638 K7EQZ3 153 aa9.01□□□□□ -0.97
ARHGEF39-205ENST00000490638 OBSCN-AS1Q96MR7 158 aa9.01□□□□□ -0.97
ARHGEF39-205ENST00000490638 V9GYY9 64 aa9□□□□□ -0.97
ARHGEF39-205ENST00000490638 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
ARHGEF39-205ENST00000490638 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
ARHGEF39-205ENST00000490638 DSCR10P59022 87 aa8.99□□□□□ -0.97
ARHGEF39-205ENST00000490638 MRPL34Q9BQ48 92 aaKnown RBP8.99□□□□□ -0.97
ARHGEF39-205ENST00000490638 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
ARHGEF39-205ENST00000490638 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
ARHGEF39-205ENST00000490638 C1orf195Q5TG92 126 aa8.97□□□□□ -0.97
ARHGEF39-205ENST00000490638 Q6ZR54 194 aa8.97□□□□□ -0.97
ARHGEF39-205ENST00000490638 A0A1W2PNM2 257 aa8.97□□□□□ -0.97
ARHGEF39-205ENST00000490638 KRTAP10-1P60331 282 aa8.97□□□□□ -0.97
ARHGEF39-205ENST00000490638 COX6B2Q6YFQ2 88 aa8.96□□□□□ -0.97
ARHGEF39-205ENST00000490638 C7orf65Q6ZTY9 151 aa8.96□□□□□ -0.97
ARHGEF39-205ENST00000490638 PRR15Q8IV56 129 aa8.95□□□□□ -0.98
ARHGEF39-205ENST00000490638 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
ARHGEF39-205ENST00000490638 A0A1B0GVX0 72 aa8.94□□□□□ -0.98
ARHGEF39-205ENST00000490638 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
ARHGEF39-205ENST00000490638 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
ARHGEF39-205ENST00000490638 Q8NDZ9 215 aa8.92□□□□□ -0.98
ARHGEF39-205ENST00000490638 IGLV5-48A0A075B6I7 105 aa8.91□□□□□ -0.98
ARHGEF39-205ENST00000490638 A6NED7 52 aa8.9□□□□□ -0.99
ARHGEF39-205ENST00000490638 TENM2Q9NT68 2774 aa8.9□□□□□ -0.99
ARHGEF39-205ENST00000490638 LINC01600Q96MT4 127 aa8.9□□□□□ -0.99
ARHGEF39-205ENST00000490638 FBN1P35555 2871 aaKnown RBP8.89□□□□□ -0.99
ARHGEF39-205ENST00000490638 FAM229BQ4G0N7 80 aa8.88□□□□□ -0.99
ARHGEF39-205ENST00000490638 Q5VSD8 79 aa8.88□□□□□ -0.99
ARHGEF39-205ENST00000490638 SPRR1AP35321 89 aa8.87□□□□□ -0.99
ARHGEF39-205ENST00000490638 H3BPC8 53 aa8.86□□□□□ -0.99
ARHGEF39-205ENST00000490638 PDZD2O15018 2839 aa8.86□□□□□ -0.99
ARHGEF39-205ENST00000490638 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
ARHGEF39-205ENST00000490638 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
ARHGEF39-205ENST00000490638 ACYP2P14621 99 aa8.84□□□□□ -0.99
ARHGEF39-205ENST00000490638 PANO1I0J062 215 aa8.82□□□□□ -1
ARHGEF39-205ENST00000490638 CD164Q04900 197 aa8.82□□□□□ -1
ARHGEF39-205ENST00000490638 VWFP04275 2813 aa8.81□□□□□ -1
ARHGEF39-205ENST00000490638 PSPHP1O15172 72 aa8.78□□□□□ -1
ARHGEF39-205ENST00000490638 ZNF469Q96JG9 3925 aaPredicted RBP8.77□□□□□ -1.01
ARHGEF39-205ENST00000490638 Q6ZRN7 208 aaPredicted RBP8.76□□□□□ -1.01
ARHGEF39-205ENST00000490638 PMAIP1Q13794 54 aa8.73□□□□□ -1.01
ARHGEF39-205ENST00000490638 H7BZZ5 65 aa8.73□□□□□ -1.01
ARHGEF39-205ENST00000490638 TGP01266 2768 aa8.72□□□□□ -1.01
ARHGEF39-205ENST00000490638 SPRR1BP22528 89 aa8.72□□□□□ -1.01
ARHGEF39-205ENST00000490638 Q6ZSA8 131 aa8.71□□□□□ -1.01
ARHGEF39-205ENST00000490638 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.01
ARHGEF39-205ENST00000490638 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
ARHGEF39-205ENST00000490638 CYSTM1Q9H1C7 97 aa8.7□□□□□ -1.02
ARHGEF39-205ENST00000490638 A0A1B0GU69 56 aa8.68□□□□□ -1.02
ARHGEF39-205ENST00000490638 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
ARHGEF39-205ENST00000490638 SRRM2Q9UQ35 2752 aaKnown RBP8.6□□□□□ -1.03
ARHGEF39-205ENST00000490638 Q8N1X5 172 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms