RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.43□□□□□ -1.54
LSAMP-205ENST00000490035 CHD6Q8TD26 2715 aa5.42□□□□□ -1.54
LSAMP-205ENST00000490035 FP248Q71RG6 208 aaPredicted RBP5.42□□□□□ -1.54
LSAMP-205ENST00000490035 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
LSAMP-205ENST00000490035 Q5W150 140 aa5.41□□□□□ -1.54
LSAMP-205ENST00000490035 C5orf42Q9H799 3197 aa5.41□□□□□ -1.54
LSAMP-205ENST00000490035 Q6ZR54 194 aa5.39□□□□□ -1.55
LSAMP-205ENST00000490035 CEP350Q5VT06 3117 aa5.39□□□□□ -1.55
LSAMP-205ENST00000490035 Q5XG85 94 aa5.39□□□□□ -1.55
LSAMP-205ENST00000490035 TEX15Q9BXT5 2789 aa5.38□□□□□ -1.55
LSAMP-205ENST00000490035 Q5VV11 94 aa5.38□□□□□ -1.55
LSAMP-205ENST00000490035 R4GN34 69 aa5.37□□□□□ -1.55
LSAMP-205ENST00000490035 RPL37P61927 97 aaKnown RBP5.36□□□□□ -1.55
LSAMP-205ENST00000490035 SPINK7P58062 85 aa5.36□□□□□ -1.55
LSAMP-205ENST00000490035 UNC79Q9P2D8 2635 aa5.36□□□□□ -1.55
LSAMP-205ENST00000490035 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
LSAMP-205ENST00000490035 M0R2T5 61 aa5.35□□□□□ -1.55
LSAMP-205ENST00000490035 ROMO1P60602 79 aa5.35□□□□□ -1.55
LSAMP-205ENST00000490035 TRANK1O15050 2925 aa5.35□□□□□ -1.55
LSAMP-205ENST00000490035 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
LSAMP-205ENST00000490035 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
LSAMP-205ENST00000490035 GCN1Q92616 2671 aaKnown RBP5.32□□□□□ -1.56
LSAMP-205ENST00000490035 OXTP01178 125 aa5.32□□□□□ -1.56
LSAMP-205ENST00000490035 ITPR2Q14571 2701 aa5.31□□□□□ -1.56
LSAMP-205ENST00000490035 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
LSAMP-205ENST00000490035 CHD7Q9P2D1 2997 aa5.3□□□□□ -1.56
LSAMP-205ENST00000490035 H1FX-AS1Q4G0G2 97 aa5.3□□□□□ -1.56
LSAMP-205ENST00000490035 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
LSAMP-205ENST00000490035 Q8NDZ9 215 aa5.29□□□□□ -1.56
LSAMP-205ENST00000490035 ZNF292O60281 2723 aa5.27□□□□□ -1.57
LSAMP-205ENST00000490035 CFAP54Q96N23 3096 aa5.26□□□□□ -1.57
LSAMP-205ENST00000490035 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
LSAMP-205ENST00000490035 UTRNP46939 3433 aa5.24□□□□□ -1.57
LSAMP-205ENST00000490035 LCE6AA0A183 80 aa5.24□□□□□ -1.57
LSAMP-205ENST00000490035 NOTCH1P46531 2555 aa5.24□□□□□ -1.57
LSAMP-205ENST00000490035 COL6A5A8TX70 2615 aa5.23□□□□□ -1.57
LSAMP-205ENST00000490035 A0A087X002 238 aa5.23□□□□□ -1.57
LSAMP-205ENST00000490035 Q5VSD8 79 aa5.22□□□□□ -1.57
LSAMP-205ENST00000490035 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
LSAMP-205ENST00000490035 CYSTM1Q9H1C7 97 aa5.21□□□□□ -1.57
LSAMP-205ENST00000490035 STAB2Q8WWQ8 2551 aa5.21□□□□□ -1.58
LSAMP-205ENST00000490035 PCNTO95613 3336 aa5.21□□□□□ -1.58
LSAMP-205ENST00000490035 PLAC4Q8WY50 150 aa5.21□□□□□ -1.58
LSAMP-205ENST00000490035 M0QZ58 72 aa5.2□□□□□ -1.58
LSAMP-205ENST00000490035 PANO1I0J062 215 aa5.2□□□□□ -1.58
LSAMP-205ENST00000490035 NSD1Q96L73 2696 aaPredicted RBP5.2□□□□□ -1.58
LSAMP-205ENST00000490035 MGAQ8IWI9 3026 aa5.19□□□□□ -1.58
LSAMP-205ENST00000490035 KRTAP1-5Q9BYS1 174 aa5.19□□□□□ -1.58
LSAMP-205ENST00000490035 SETXQ7Z333 2677 aaKnown RBP5.19□□□□□ -1.58
LSAMP-205ENST00000490035 LAMA2P24043 3122 aaKnown RBP5.17□□□□□ -1.58
LSAMP-205ENST00000490035 H3BS24 57 aa5.16□□□□□ -1.58
LSAMP-205ENST00000490035 KRTAP10-1P60331 282 aa5.16□□□□□ -1.58
LSAMP-205ENST00000490035 A0A0C4DFX4 3053 aa5.15□□□□□ -1.58
LSAMP-205ENST00000490035 APCP25054 2843 aa5.15□□□□□ -1.59
LSAMP-205ENST00000490035 PRAC1Q96KF2 57 aa5.15□□□□□ -1.59
LSAMP-205ENST00000490035 CHD9Q3L8U1 2897 aa5.14□□□□□ -1.59
LSAMP-205ENST00000490035 ADM2Q7Z4H4 148 aa5.14□□□□□ -1.59
LSAMP-205ENST00000490035 KRTAP10-2P60368 255 aa5.1□□□□□ -1.59
LSAMP-205ENST00000490035 MAP1AP78559 2803 aaPredicted RBP5.08□□□□□ -1.6
LSAMP-205ENST00000490035 NBEAL2Q6ZNJ1 2754 aa5.08□□□□□ -1.6
LSAMP-205ENST00000490035 VPS13AQ96RL7 3174 aa5.07□□□□□ -1.6
LSAMP-205ENST00000490035 FRYQ5TBA9 3013 aa5.06□□□□□ -1.6
LSAMP-205ENST00000490035 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
LSAMP-205ENST00000490035 BAHCC1Q9P281 2608 aa5.06□□□□□ -1.6
LSAMP-205ENST00000490035 IGSF10Q6WRI0 2623 aa5.06□□□□□ -1.6
LSAMP-205ENST00000490035 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
LSAMP-205ENST00000490035 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
LSAMP-205ENST00000490035 MKI67P46013 3256 aaKnown RBP5.04□□□□□ -1.6
LSAMP-205ENST00000490035 KRTAP21-3Q3LHN1 58 aa5.04□□□□□ -1.6
LSAMP-205ENST00000490035 A6NN06 94 aa5.04□□□□□ -1.6
LSAMP-205ENST00000490035 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
LSAMP-205ENST00000490035 KRTAP13-1Q8IUC0 172 aa5.04□□□□□ -1.6
LSAMP-205ENST00000490035 A8MUU9 505 aa5.03□□□□□ -1.6
LSAMP-205ENST00000490035 TRIOO75962 3097 aa5.02□□□□□ -1.61
LSAMP-205ENST00000490035 HTTP42858 3142 aa5.02□□□□□ -1.61
LSAMP-205ENST00000490035 DSPP15924 2871 aaKnown RBP5.01□□□□□ -1.61
LSAMP-205ENST00000490035 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
LSAMP-205ENST00000490035 UBR5O95071 2799 aaPredicted RBP4.99□□□□□ -1.61
LSAMP-205ENST00000490035 ITPR1Q14643 2758 aa4.98□□□□□ -1.61
LSAMP-205ENST00000490035 WDFY4Q6ZS81 3184 aa4.97□□□□□ -1.61
LSAMP-205ENST00000490035 UTP20O75691 2785 aaKnown RBP4.96□□□□□ -1.61
LSAMP-205ENST00000490035 TNP1P09430 55 aa4.96□□□□□ -1.62
LSAMP-205ENST00000490035 PRUNE2Q8WUY3 3088 aa4.96□□□□□ -1.62
LSAMP-205ENST00000490035 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.62
LSAMP-205ENST00000490035 RANBP2P49792 3224 aaKnown RBP4.96□□□□□ -1.62
LSAMP-205ENST00000490035 KALRNO60229 2985 aa4.95□□□□□ -1.62
LSAMP-205ENST00000490035 FRYLO94915 3013 aa4.93□□□□□ -1.62
LSAMP-205ENST00000490035 KRTAP13-2Q52LG2 175 aa4.91□□□□□ -1.62
LSAMP-205ENST00000490035 KRTAP7-1Q8IUC3 87 aa4.9□□□□□ -1.62
LSAMP-205ENST00000490035 LRBAP50851 2863 aa4.9□□□□□ -1.63
LSAMP-205ENST00000490035 LAMA3Q16787 3333 aa4.9□□□□□ -1.63
LSAMP-205ENST00000490035 KRTAP11-1Q8IUC1 163 aa4.9□□□□□ -1.63
LSAMP-205ENST00000490035 XIRP2A4UGR9 3374 aa4.86□□□□□ -1.63
LSAMP-205ENST00000490035 UNC80Q8N2C7 3258 aa4.85□□□□□ -1.63
LSAMP-205ENST00000490035 NIPBLQ6KC79 2804 aaeCLIP4.85□□□□□ -1.63
LSAMP-205ENST00000490035 CELSR3Q9NYQ7 3312 aa4.84□□□□□ -1.63
LSAMP-205ENST00000490035 A8MU10 97 aa4.83□□□□□ -1.64
LSAMP-205ENST00000490035 FLNCQ14315 2725 aa4.83□□□□□ -1.64
LSAMP-205ENST00000490035 LAMA1P25391 3075 aa4.81□□□□□ -1.64
LSAMP-205ENST00000490035 REV3LO60673 3130 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 2100.8 ms