RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
HLA-F-229ENST00000489502 PRR4Q16378 134 aa8.27□□□□□ -1.09
HLA-F-229ENST00000489502 A0A0G2JQZ4 141 aa8.25□□□□□ -1.09
HLA-F-229ENST00000489502 BATFQ16520 125 aa8.25□□□□□ -1.09
HLA-F-229ENST00000489502 F8WEM9 126 aa8.24□□□□□ -1.09
HLA-F-229ENST00000489502 SPINK1P00995 79 aa8.24□□□□□ -1.09
HLA-F-229ENST00000489502 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
HLA-F-229ENST00000489502 LRP2P98164 4655 aa8.24□□□□□ -1.09
HLA-F-229ENST00000489502 SNCGO76070 127 aa8.23□□□□□ -1.09
HLA-F-229ENST00000489502 NAA38Q9BRA0 125 aaKnown RBP8.23□□□□□ -1.09
HLA-F-229ENST00000489502 A0A1B0GX51 115 aa8.22□□□□□ -1.09
HLA-F-229ENST00000489502 COX6CP09669 75 aa8.22□□□□□ -1.09
HLA-F-229ENST00000489502 PPDPFLQ8WWR9 84 aa8.21□□□□□ -1.1
HLA-F-229ENST00000489502 SNHG12Q9BXW3 62 aa8.2□□□□□ -1.1
HLA-F-229ENST00000489502 H3BUT2 72 aa8.19□□□□□ -1.1
HLA-F-229ENST00000489502 DNAL4O96015 105 aa8.19□□□□□ -1.1
HLA-F-229ENST00000489502 SCGB1C2P0DMR2 95 aa8.19□□□□□ -1.1
HLA-F-229ENST00000489502 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
HLA-F-229ENST00000489502 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
HLA-F-229ENST00000489502 LPAP08519 4548 aa8.19□□□□□ -1.1
HLA-F-229ENST00000489502 LST1O00453 97 aa8.17□□□□□ -1.1
HLA-F-229ENST00000489502 IGLV8-61A0A075B6I0 122 aa8.16□□□□□ -1.1
HLA-F-229ENST00000489502 FABP2P12104 132 aa8.16□□□□□ -1.1
HLA-F-229ENST00000489502 IGFL1Q6UW32 110 aa8.16□□□□□ -1.1
HLA-F-229ENST00000489502 ORMDL1Q9P0S3 153 aa8.16□□□□□ -1.1
HLA-F-229ENST00000489502 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
HLA-F-229ENST00000489502 CD164Q04900 197 aa8.15□□□□□ -1.1
HLA-F-229ENST00000489502 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
HLA-F-229ENST00000489502 IGLV7-46A0A075B6I9 117 aa8.14□□□□□ -1.11
HLA-F-229ENST00000489502 TRACP01848 142 aa8.14□□□□□ -1.11
HLA-F-229ENST00000489502 Q6JHZ5 121 aa8.14□□□□□ -1.11
HLA-F-229ENST00000489502 A0A1B0GV72 72 aa8.13□□□□□ -1.11
HLA-F-229ENST00000489502 TCL1BO95988 128 aa8.12□□□□□ -1.11
HLA-F-229ENST00000489502 UBR4Q5T4S7 5183 aa8.11□□□□□ -1.11
HLA-F-229ENST00000489502 GHRHP01286 108 aa8.11□□□□□ -1.11
HLA-F-229ENST00000489502 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
HLA-F-229ENST00000489502 H3BMG7 143 aa8.1□□□□□ -1.11
HLA-F-229ENST00000489502 TAX1BP3O14907 124 aa8.1□□□□□ -1.11
HLA-F-229ENST00000489502 ATXN8Q156A1 80 aa8.09□□□□□ -1.11
HLA-F-229ENST00000489502 TPRXLQ17RH7 258 aa8.08□□□□□ -1.12
HLA-F-229ENST00000489502 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
HLA-F-229ENST00000489502 TRBV7-7A0A0K0K1E9 115 aa8.07□□□□□ -1.12
HLA-F-229ENST00000489502 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
HLA-F-229ENST00000489502 PCP4L1A6NKN8 68 aa8.07□□□□□ -1.12
HLA-F-229ENST00000489502 TMEM256-PLSCR3K7ERE1 68 aa8.07□□□□□ -1.12
HLA-F-229ENST00000489502 H3BQ85 93 aa8.06□□□□□ -1.12
HLA-F-229ENST00000489502 Q5XG85 94 aa8.06□□□□□ -1.12
HLA-F-229ENST00000489502 BAALC-AS2P0C853 105 aa8.04□□□□□ -1.12
HLA-F-229ENST00000489502 UBE2V1Q13404 147 aa8.04□□□□□ -1.12
HLA-F-229ENST00000489502 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
HLA-F-229ENST00000489502 A0A1W2PPM0 123 aa8.03□□□□□ -1.12
HLA-F-229ENST00000489502 C1orf195Q5TG92 126 aa8.03□□□□□ -1.12
HLA-F-229ENST00000489502 ANKRD29Q8N6D5 301 aa8.03□□□□□ -1.12
HLA-F-229ENST00000489502 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
HLA-F-229ENST00000489502 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
HLA-F-229ENST00000489502 A0A1W2PNM2 257 aa8.01□□□□□ -1.13
HLA-F-229ENST00000489502 Q6Q795 121 aa8.01□□□□□ -1.13
HLA-F-229ENST00000489502 TEN1Q86WV5 123 aa8.01□□□□□ -1.13
HLA-F-229ENST00000489502 C9JAW5 83 aa8□□□□□ -1.13
HLA-F-229ENST00000489502 COL5A1-AS1Q5SY13 56 aa8□□□□□ -1.13
HLA-F-229ENST00000489502 A0A087WSZ3 146 aa7.99□□□□□ -1.13
HLA-F-229ENST00000489502 MTURNQ8N3F0 131 aa7.98□□□□□ -1.13
HLA-F-229ENST00000489502 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
HLA-F-229ENST00000489502 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
HLA-F-229ENST00000489502 C9orf92A6NGG3 77 aa7.96□□□□□ -1.14
HLA-F-229ENST00000489502 CCKP06307 115 aa7.96□□□□□ -1.14
HLA-F-229ENST00000489502 RBM3P98179 157 aaKnown RBP7.96□□□□□ -1.14
HLA-F-229ENST00000489502 SS18L2Q9UHA2 77 aa7.96□□□□□ -1.14
HLA-F-229ENST00000489502 SPCS1Q9Y6A9 102 aa7.96□□□□□ -1.14
HLA-F-229ENST00000489502 VPS25Q9BRG1 176 aa7.95□□□□□ -1.14
HLA-F-229ENST00000489502 DSCR8Q96T75 97 aa7.94□□□□□ -1.14
HLA-F-229ENST00000489502 XP32Q5T750 250 aa7.92□□□□□ -1.14
HLA-F-229ENST00000489502 RNF213Q63HN8 5207 aa7.92□□□□□ -1.14
HLA-F-229ENST00000489502 H3BT86 120 aa7.91□□□□□ -1.14
HLA-F-229ENST00000489502 JMJD7-PLA2G4BH0Y9G9 81 aa7.9□□□□□ -1.14
HLA-F-229ENST00000489502 Q96NJ1 140 aa7.9□□□□□ -1.14
HLA-F-229ENST00000489502 C14orf132Q9NPU4 83 aa7.9□□□□□ -1.14
HLA-F-229ENST00000489502 K7EP34 96 aa7.88□□□□□ -1.15
HLA-F-229ENST00000489502 Q6ZQT0 140 aa7.88□□□□□ -1.15
HLA-F-229ENST00000489502 OBSCN-AS1Q96MR7 158 aa7.87□□□□□ -1.15
HLA-F-229ENST00000489502 SIGMAR1Q99720 223 aa7.87□□□□□ -1.15
HLA-F-229ENST00000489502 MUC17Q685J3 4493 aa7.87□□□□□ -1.15
HLA-F-229ENST00000489502 LOC110117498A0A087WWA1 95 aa7.86□□□□□ -1.15
HLA-F-229ENST00000489502 SMCPP49901 116 aaPredicted RBP7.85□□□□□ -1.15
HLA-F-229ENST00000489502 DEFB116Q30KQ4 102 aa7.83□□□□□ -1.16
HLA-F-229ENST00000489502 PRO0461Q9UI25 63 aa7.82□□□□□ -1.16
HLA-F-229ENST00000489502 IGKV4-1P06312 121 aa7.81□□□□□ -1.16
HLA-F-229ENST00000489502 PDE6GP18545 87 aa7.81□□□□□ -1.16
HLA-F-229ENST00000489502 LINC00472Q9H8W2 130 aa7.81□□□□□ -1.16
HLA-F-229ENST00000489502 SEC61BP60468 96 aaKnown RBP7.8□□□□□ -1.16
HLA-F-229ENST00000489502 GTF2H5Q6ZYL4 71 aa7.78□□□□□ -1.16
HLA-F-229ENST00000489502 DSCR10P59022 87 aa7.77□□□□□ -1.17
HLA-F-229ENST00000489502 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
HLA-F-229ENST00000489502 C21orf62-AS1Q17RA5 79 aa7.76□□□□□ -1.17
HLA-F-229ENST00000489502 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
HLA-F-229ENST00000489502 MUC2Q02817 5179 aa7.76□□□□□ -1.17
HLA-F-229ENST00000489502 KRTAP4-1Q9BYQ7 146 aa7.75□□□□□ -1.17
HLA-F-229ENST00000489502 A0A1B0GW54 56 aa7.74□□□□□ -1.17
HLA-F-229ENST00000489502 IGHV6-1A0A0B4J1U7 121 aa7.72□□□□□ -1.17
HLA-F-229ENST00000489502 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms