RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 C6orf99Q4VX62 202 aa7.87□□□□□ -1.15
SPTLC1-207ENST00000488921 K7ERJ3 54 aa7.86□□□□□ -1.15
SPTLC1-207ENST00000488921 MUC17Q685J3 4493 aa7.86□□□□□ -1.15
SPTLC1-207ENST00000488921 COX7BP24311 80 aa7.85□□□□□ -1.15
SPTLC1-207ENST00000488921 PSMB2P49721 201 aa7.85□□□□□ -1.15
SPTLC1-207ENST00000488921 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
SPTLC1-207ENST00000488921 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
SPTLC1-207ENST00000488921 TRBV7-6A0A0J9YX20 115 aa7.84□□□□□ -1.15
SPTLC1-207ENST00000488921 SNCGO76070 127 aa7.84□□□□□ -1.15
SPTLC1-207ENST00000488921 COX6CP09669 75 aa7.84□□□□□ -1.15
SPTLC1-207ENST00000488921 SLC25A20O43772 301 aa7.82□□□□□ -1.16
SPTLC1-207ENST00000488921 H0YGX0 51 aa7.81□□□□□ -1.16
SPTLC1-207ENST00000488921 SCGB1C2P0DMR2 95 aa7.81□□□□□ -1.16
SPTLC1-207ENST00000488921 ELOF1P60002 83 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-207ENST00000488921 Q8N377 158 aa7.81□□□□□ -1.16
SPTLC1-207ENST00000488921 ST20-AS1Q8NBB2 130 aa7.81□□□□□ -1.16
SPTLC1-207ENST00000488921 SPRR1BP22528 89 aa7.8□□□□□ -1.16
SPTLC1-207ENST00000488921 SNHG12Q9BXW3 62 aa7.8□□□□□ -1.16
SPTLC1-207ENST00000488921 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
SPTLC1-207ENST00000488921 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
SPTLC1-207ENST00000488921 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
SPTLC1-207ENST00000488921 TRIAP1O43715 76 aa7.77□□□□□ -1.17
SPTLC1-207ENST00000488921 LYRM7Q5U5X0 104 aa7.76□□□□□ -1.17
SPTLC1-207ENST00000488921 LINC00575Q6W349 94 aa7.76□□□□□ -1.17
SPTLC1-207ENST00000488921 LIMD2Q9BT23 127 aa7.76□□□□□ -1.17
SPTLC1-207ENST00000488921 hADV29S1A0JD25 119 aa7.75□□□□□ -1.17
SPTLC1-207ENST00000488921 C9orf118A6NHY6 69 aa7.74□□□□□ -1.17
SPTLC1-207ENST00000488921 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
SPTLC1-207ENST00000488921 H3BUT2 72 aa7.73□□□□□ -1.17
SPTLC1-207ENST00000488921 TAX1BP3O14907 124 aa7.73□□□□□ -1.17
SPTLC1-207ENST00000488921 A0A1B0GX51 115 aa7.72□□□□□ -1.17
SPTLC1-207ENST00000488921 NAA38Q9BRA0 125 aaKnown RBP7.72□□□□□ -1.17
SPTLC1-207ENST00000488921 DNAL4O96015 105 aa7.71□□□□□ -1.18
SPTLC1-207ENST00000488921 GHRHP01286 108 aa7.71□□□□□ -1.18
SPTLC1-207ENST00000488921 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.18
SPTLC1-207ENST00000488921 DEFB105AQ8NG35 78 aa7.71□□□□□ -1.18
SPTLC1-207ENST00000488921 CLEC2BQ92478 149 aa7.71□□□□□ -1.18
SPTLC1-207ENST00000488921 FABP2P12104 132 aa7.7□□□□□ -1.18
SPTLC1-207ENST00000488921 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
SPTLC1-207ENST00000488921 TRBV20-1A0A075B6N2 111 aa7.69□□□□□ -1.18
SPTLC1-207ENST00000488921 CD164Q04900 197 aa7.69□□□□□ -1.18
SPTLC1-207ENST00000488921 ATXN8Q156A1 80 aa7.69□□□□□ -1.18
SPTLC1-207ENST00000488921 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
SPTLC1-207ENST00000488921 IGLV5-48A0A075B6I7 105 aa7.68□□□□□ -1.18
SPTLC1-207ENST00000488921 A0A1W2PPM0 123 aa7.68□□□□□ -1.18
SPTLC1-207ENST00000488921 OCIAD2Q56VL3 154 aa7.68□□□□□ -1.18
SPTLC1-207ENST00000488921 HRCT1Q6UXD1 115 aa7.68□□□□□ -1.18
SPTLC1-207ENST00000488921 Q6ZQY7 126 aa7.68□□□□□ -1.18
SPTLC1-207ENST00000488921 FAM218AQ96MZ4 157 aa7.68□□□□□ -1.18
SPTLC1-207ENST00000488921 TRACP01848 142 aa7.67□□□□□ -1.18
SPTLC1-207ENST00000488921 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
SPTLC1-207ENST00000488921 H3BQ85 93 aa7.66□□□□□ -1.18
SPTLC1-207ENST00000488921 LST1O00453 97 aa7.66□□□□□ -1.18
SPTLC1-207ENST00000488921 LINC01547P58512 204 aaPredicted RBP7.65□□□□□ -1.18
SPTLC1-207ENST00000488921 TCL1BO95988 128 aa7.64□□□□□ -1.19
SPTLC1-207ENST00000488921 XP32Q5T750 250 aa7.64□□□□□ -1.19
SPTLC1-207ENST00000488921 SMIM29Q86T20 159 aa7.64□□□□□ -1.19
SPTLC1-207ENST00000488921 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
SPTLC1-207ENST00000488921 ORMDL1Q9P0S3 153 aa7.64□□□□□ -1.19
SPTLC1-207ENST00000488921 SPCS1Q9Y6A9 102 aa7.63□□□□□ -1.19
SPTLC1-207ENST00000488921 F8WEM9 126 aa7.61□□□□□ -1.19
SPTLC1-207ENST00000488921 TMEM256-PLSCR3K7ERE1 68 aa7.61□□□□□ -1.19
SPTLC1-207ENST00000488921 Q5XG85 94 aa7.61□□□□□ -1.19
SPTLC1-207ENST00000488921 GTF2H5Q6ZYL4 71 aa7.6□□□□□ -1.19
SPTLC1-207ENST00000488921 H3BMG7 143 aa7.58□□□□□ -1.2
SPTLC1-207ENST00000488921 BAALC-AS2P0C853 105 aa7.58□□□□□ -1.2
SPTLC1-207ENST00000488921 C9JAW5 83 aa7.57□□□□□ -1.2
SPTLC1-207ENST00000488921 C9orf92A6NGG3 77 aa7.56□□□□□ -1.2
SPTLC1-207ENST00000488921 K7EP34 96 aa7.56□□□□□ -1.2
SPTLC1-207ENST00000488921 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
SPTLC1-207ENST00000488921 UBE2V1Q13404 147 aa7.55□□□□□ -1.2
SPTLC1-207ENST00000488921 C1orf195Q5TG92 126 aa7.54□□□□□ -1.2
SPTLC1-207ENST00000488921 Q6JHZ5 121 aa7.54□□□□□ -1.2
SPTLC1-207ENST00000488921 KRTAP4-1Q9BYQ7 146 aa7.54□□□□□ -1.2
SPTLC1-207ENST00000488921 A0A0G2JQZ4 141 aa7.53□□□□□ -1.2
SPTLC1-207ENST00000488921 ANKRD29Q8N6D5 301 aa7.53□□□□□ -1.2
SPTLC1-207ENST00000488921 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
SPTLC1-207ENST00000488921 H3BT86 120 aa7.51□□□□□ -1.21
SPTLC1-207ENST00000488921 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
SPTLC1-207ENST00000488921 PCOTHQ58A44 107 aa7.49□□□□□ -1.21
SPTLC1-207ENST00000488921 RBM3P98179 157 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-207ENST00000488921 IGFL1Q6UW32 110 aa7.48□□□□□ -1.21
SPTLC1-207ENST00000488921 MTURNQ8N3F0 131 aa7.48□□□□□ -1.21
SPTLC1-207ENST00000488921 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
SPTLC1-207ENST00000488921 TRBV7-7A0A0K0K1E9 115 aa7.47□□□□□ -1.21
SPTLC1-207ENST00000488921 A0A1B0GV72 72 aa7.47□□□□□ -1.21
SPTLC1-207ENST00000488921 A0A1B0GV90 55 aa7.47□□□□□ -1.21
SPTLC1-207ENST00000488921 F8W1H4 67 aa7.47□□□□□ -1.21
SPTLC1-207ENST00000488921 DSCR8Q96T75 97 aa7.47□□□□□ -1.21
SPTLC1-207ENST00000488921 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
SPTLC1-207ENST00000488921 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
SPTLC1-207ENST00000488921 PDE6GP18545 87 aa7.42□□□□□ -1.22
SPTLC1-207ENST00000488921 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
SPTLC1-207ENST00000488921 SS18L2Q9UHA2 77 aa7.41□□□□□ -1.22
SPTLC1-207ENST00000488921 C21orf62-AS1Q17RA5 79 aa7.4□□□□□ -1.22
SPTLC1-207ENST00000488921 TEN1Q86WV5 123 aa7.4□□□□□ -1.22
SPTLC1-207ENST00000488921 TRBV7-4A0A0J9YYF1 115 aa7.39□□□□□ -1.23
SPTLC1-207ENST00000488921 CCKP06307 115 aa7.39□□□□□ -1.23
SPTLC1-207ENST00000488921 VPS25Q9BRG1 176 aa7.39□□□□□ -1.23
SPTLC1-207ENST00000488921 Q6Q795 121 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms