RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 SMIM11BQ8TCY0 68 aa5.75□□□□□ -1.49
PDPN-206ENST00000488631 NHP2Q9NX24 153 aaKnown RBP5.75□□□□□ -1.49
PDPN-206ENST00000488631 LAMTOR3Q9UHA4 124 aa5.75□□□□□ -1.49
PDPN-206ENST00000488631 TRBV7-6A0A0J9YX20 115 aa5.74□□□□□ -1.49
PDPN-206ENST00000488631 Q1RN00 199 aa5.74□□□□□ -1.49
PDPN-206ENST00000488631 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
PDPN-206ENST00000488631 COL5A1-AS1Q5SY13 56 aa5.74□□□□□ -1.49
PDPN-206ENST00000488631 RETNLBQ9BQ08 111 aa5.74□□□□□ -1.49
PDPN-206ENST00000488631 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
PDPN-206ENST00000488631 SNCGO76070 127 aa5.72□□□□□ -1.49
PDPN-206ENST00000488631 PRO1933Q9H354 126 aa5.72□□□□□ -1.49
PDPN-206ENST00000488631 HIGD1BQ9P298 99 aa5.72□□□□□ -1.49
PDPN-206ENST00000488631 UQCR10Q9UDW1 63 aa5.72□□□□□ -1.49
PDPN-206ENST00000488631 TEX49A0A1B0GTD5 131 aa5.71□□□□□ -1.5
PDPN-206ENST00000488631 SSBP3-AS1Q7Z2R9 100 aa5.71□□□□□ -1.5
PDPN-206ENST00000488631 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
PDPN-206ENST00000488631 A0A1B0GV90 55 aa5.69□□□□□ -1.5
PDPN-206ENST00000488631 F8WEM9 126 aa5.69□□□□□ -1.5
PDPN-206ENST00000488631 SPINK1P00995 79 aa5.69□□□□□ -1.5
PDPN-206ENST00000488631 BVES-AS1Q5T3Y7 98 aa5.69□□□□□ -1.5
PDPN-206ENST00000488631 CEND1Q8N111 149 aa5.69□□□□□ -1.5
PDPN-206ENST00000488631 hADV29S1A0JD25 119 aa5.68□□□□□ -1.5
PDPN-206ENST00000488631 C2orf91Q6ZV80 131 aa5.68□□□□□ -1.5
PDPN-206ENST00000488631 IGLV7-46A0A075B6I9 117 aa5.67□□□□□ -1.5
PDPN-206ENST00000488631 CFC1BP0CG36 223 aa5.67□□□□□ -1.5
PDPN-206ENST00000488631 CFC1P0CG37 223 aa5.67□□□□□ -1.5
PDPN-206ENST00000488631 SPRR1BP22528 89 aa5.66□□□□□ -1.5
PDPN-206ENST00000488631 PSMB2P49721 201 aa5.66□□□□□ -1.5
PDPN-206ENST00000488631 HSD52Q0P140 79 aa5.66□□□□□ -1.5
PDPN-206ENST00000488631 LINC00575Q6W349 94 aa5.66□□□□□ -1.5
PDPN-206ENST00000488631 PRO1854Q9UHT4 67 aa5.66□□□□□ -1.5
PDPN-206ENST00000488631 A0A0B4J2C4 111 aa5.65□□□□□ -1.5
PDPN-206ENST00000488631 Q6ZQY7 126 aa5.65□□□□□ -1.5
PDPN-206ENST00000488631 SNHG12Q9BXW3 62 aa5.65□□□□□ -1.5
PDPN-206ENST00000488631 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
PDPN-206ENST00000488631 FXYD2P54710 66 aa5.64□□□□□ -1.51
PDPN-206ENST00000488631 C9orf118A6NHY6 69 aa5.63□□□□□ -1.51
PDPN-206ENST00000488631 H0YGX0 51 aa5.63□□□□□ -1.51
PDPN-206ENST00000488631 LIMD2Q9BT23 127 aa5.63□□□□□ -1.51
PDPN-206ENST00000488631 IGLV5-48A0A075B6I7 105 aa5.62□□□□□ -1.51
PDPN-206ENST00000488631 K7ERJ3 54 aa5.62□□□□□ -1.51
PDPN-206ENST00000488631 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.62□□□□□ -1.51
PDPN-206ENST00000488631 Q8N377 158 aa5.62□□□□□ -1.51
PDPN-206ENST00000488631 COX6CP09669 75 aa5.61□□□□□ -1.51
PDPN-206ENST00000488631 FP248Q71RG6 208 aaPredicted RBP5.61□□□□□ -1.51
PDPN-206ENST00000488631 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
PDPN-206ENST00000488631 DNAL4O96015 105 aa5.6□□□□□ -1.51
PDPN-206ENST00000488631 SCGB1C2P0DMR2 95 aa5.6□□□□□ -1.51
PDPN-206ENST00000488631 FABP2P12104 132 aa5.6□□□□□ -1.51
PDPN-206ENST00000488631 SMIM29Q86T20 159 aa5.6□□□□□ -1.51
PDPN-206ENST00000488631 A0A0G2JQZ4 141 aa5.59□□□□□ -1.51
PDPN-206ENST00000488631 LINC01547P58512 204 aaPredicted RBP5.59□□□□□ -1.51
PDPN-206ENST00000488631 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
PDPN-206ENST00000488631 BATFQ16520 125 aa5.59□□□□□ -1.51
PDPN-206ENST00000488631 UBE2V1Q13404 147 aa5.58□□□□□ -1.52
PDPN-206ENST00000488631 OCIAD2Q56VL3 154 aa5.58□□□□□ -1.52
PDPN-206ENST00000488631 GTF2H5Q6ZYL4 71 aa5.58□□□□□ -1.52
PDPN-206ENST00000488631 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
PDPN-206ENST00000488631 K7ERU9 68 aa5.57□□□□□ -1.52
PDPN-206ENST00000488631 TRIAP1O43715 76 aa5.57□□□□□ -1.52
PDPN-206ENST00000488631 TCL1BO95988 128 aa5.57□□□□□ -1.52
PDPN-206ENST00000488631 CD164Q04900 197 aa5.57□□□□□ -1.52
PDPN-206ENST00000488631 Q6JHZ5 121 aa5.57□□□□□ -1.52
PDPN-206ENST00000488631 H3BUT2 72 aa5.56□□□□□ -1.52
PDPN-206ENST00000488631 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
PDPN-206ENST00000488631 CLEC2BQ92478 149 aa5.56□□□□□ -1.52
PDPN-206ENST00000488631 FAM218AQ96MZ4 157 aa5.56□□□□□ -1.52
PDPN-206ENST00000488631 TPRXLQ17RH7 258 aa5.55□□□□□ -1.52
PDPN-206ENST00000488631 LRP2P98164 4655 aa5.55□□□□□ -1.52
PDPN-206ENST00000488631 A0A1B0GV72 72 aa5.54□□□□□ -1.52
PDPN-206ENST00000488631 A0A1B0GX51 115 aa5.54□□□□□ -1.52
PDPN-206ENST00000488631 NDUFV3P56181 108 aaKnown RBP5.54□□□□□ -1.52
PDPN-206ENST00000488631 J3QR89 54 aa5.53□□□□□ -1.52
PDPN-206ENST00000488631 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
PDPN-206ENST00000488631 LPAP08519 4548 aa5.53□□□□□ -1.52
PDPN-206ENST00000488631 H3BMG7 143 aa5.52□□□□□ -1.53
PDPN-206ENST00000488631 IGFL1Q6UW32 110 aa5.52□□□□□ -1.53
PDPN-206ENST00000488631 C9orf92A6NGG3 77 aa5.51□□□□□ -1.53
PDPN-206ENST00000488631 H3BQ85 93 aa5.5□□□□□ -1.53
PDPN-206ENST00000488631 PCP4P48539 62 aa5.5□□□□□ -1.53
PDPN-206ENST00000488631 KRTAP13-3Q3SY46 172 aa5.5□□□□□ -1.53
PDPN-206ENST00000488631 TRBV7-7A0A0K0K1E9 115 aa5.49□□□□□ -1.53
PDPN-206ENST00000488631 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
PDPN-206ENST00000488631 IGLV8-61A0A075B6I0 122 aa5.48□□□□□ -1.53
PDPN-206ENST00000488631 LYRM7Q5U5X0 104 aa5.48□□□□□ -1.53
PDPN-206ENST00000488631 ANKRD29Q8N6D5 301 aa5.48□□□□□ -1.53
PDPN-206ENST00000488631 NAA38Q9BRA0 125 aaKnown RBP5.48□□□□□ -1.53
PDPN-206ENST00000488631 VPS25Q9BRG1 176 aa5.48□□□□□ -1.53
PDPN-206ENST00000488631 LST1O00453 97 aa5.47□□□□□ -1.53
PDPN-206ENST00000488631 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
PDPN-206ENST00000488631 C1orf195Q5TG92 126 aa5.47□□□□□ -1.53
PDPN-206ENST00000488631 SS18L2Q9UHA2 77 aa5.47□□□□□ -1.53
PDPN-206ENST00000488631 A0A0U1RQV1 116 aa5.46□□□□□ -1.54
PDPN-206ENST00000488631 ATXN8Q156A1 80 aa5.46□□□□□ -1.54
PDPN-206ENST00000488631 Q5XG85 94 aa5.46□□□□□ -1.54
PDPN-206ENST00000488631 TEN1Q86WV5 123 aa5.46□□□□□ -1.54
PDPN-206ENST00000488631 TRACP01848 142 aa5.45□□□□□ -1.54
PDPN-206ENST00000488631 MTURNQ8N3F0 131 aa5.45□□□□□ -1.54
PDPN-206ENST00000488631 A0A087WSZ3 146 aa5.44□□□□□ -1.54
PDPN-206ENST00000488631 BAALC-AS2P0C853 105 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms