RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 PKDREJQ9NTG1 2253 aa2.18□□□□□ -2.06
PCGF3-212ENST00000488032 S4R3F8 94 aa2.18□□□□□ -2.06
PCGF3-212ENST00000488032 SPTA1P02549 2419 aa2.18□□□□□ -2.06
PCGF3-212ENST00000488032 SPTBN2O15020 2390 aa2.17□□□□□ -2.06
PCGF3-212ENST00000488032 H3BNG1 76 aa2.17□□□□□ -2.06
PCGF3-212ENST00000488032 PTPRZ1P23471 2315 aaPredicted RBP2.16□□□□□ -2.06
PCGF3-212ENST00000488032 DEFB136Q30KP8 78 aa2.16□□□□□ -2.06
PCGF3-212ENST00000488032 APLNQ9ULZ1 77 aa2.16□□□□□ -2.06
PCGF3-212ENST00000488032 MGAQ8IWI9 3026 aa2.16□□□□□ -2.06
PCGF3-212ENST00000488032 FLG2Q5D862 2391 aaPredicted RBP2.15□□□□□ -2.06
PCGF3-212ENST00000488032 FAM208BQ5VWN6 2430 aa2.15□□□□□ -2.07
PCGF3-212ENST00000488032 Q5VSD8 79 aa2.14□□□□□ -2.07
PCGF3-212ENST00000488032 APC2O95996 2303 aa2.14□□□□□ -2.07
PCGF3-212ENST00000488032 CEP250Q9BV73 2442 aa2.13□□□□□ -2.07
PCGF3-212ENST00000488032 COL6A3P12111 3177 aa2.12□□□□□ -2.07
PCGF3-212ENST00000488032 OTOGLQ3ZCN5 2332 aa2.12□□□□□ -2.07
PCGF3-212ENST00000488032 LINC01556Q5JQF7 62 aa2.12□□□□□ -2.07
PCGF3-212ENST00000488032 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
PCGF3-212ENST00000488032 DEFB124Q8NES8 71 aa2.12□□□□□ -2.07
PCGF3-212ENST00000488032 CEP350Q5VT06 3117 aa2.11□□□□□ -2.07
PCGF3-212ENST00000488032 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
PCGF3-212ENST00000488032 HIVEP2P31629 2446 aa2.11□□□□□ -2.07
PCGF3-212ENST00000488032 CSPG4Q6UVK1 2322 aa2.11□□□□□ -2.07
PCGF3-212ENST00000488032 M0QZ58 72 aa2.1□□□□□ -2.07
PCGF3-212ENST00000488032 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
PCGF3-212ENST00000488032 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
PCGF3-212ENST00000488032 CACNA1HO95180 2353 aa2.1□□□□□ -2.07
PCGF3-212ENST00000488032 GPR179Q6PRD1 2367 aa2.09□□□□□ -2.07
PCGF3-212ENST00000488032 A0A096LPF7 62 aa2.09□□□□□ -2.07
PCGF3-212ENST00000488032 SPTBN4Q9H254 2564 aa2.08□□□□□ -2.08
PCGF3-212ENST00000488032 FAM186AA6NE01 2351 aa2.08□□□□□ -2.08
PCGF3-212ENST00000488032 SPART-AS1P0CW21 52 aa2.08□□□□□ -2.08
PCGF3-212ENST00000488032 U3KQA8 63 aa2.08□□□□□ -2.08
PCGF3-212ENST00000488032 ROS1P08922 2347 aa2.08□□□□□ -2.08
PCGF3-212ENST00000488032 SRCAPQ6ZRS2 3230 aa2.07□□□□□ -2.08
PCGF3-212ENST00000488032 A0A0D9SG42 100 aa2.07□□□□□ -2.08
PCGF3-212ENST00000488032 KRTAP13-2Q52LG2 175 aa2.07□□□□□ -2.08
PCGF3-212ENST00000488032 SPINK6Q6UWN8 80 aa2.07□□□□□ -2.08
PCGF3-212ENST00000488032 KRTAP10-8P60410 259 aa2.06□□□□□ -2.08
PCGF3-212ENST00000488032 DEFB103AP81534 67 aa2.06□□□□□ -2.08
PCGF3-212ENST00000488032 PIEZO2Q9H5I5 2752 aa2.06□□□□□ -2.08
PCGF3-212ENST00000488032 A0A096LNI7 61 aa2.05□□□□□ -2.08
PCGF3-212ENST00000488032 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
PCGF3-212ENST00000488032 CHD7Q9P2D1 2997 aa2.05□□□□□ -2.08
PCGF3-212ENST00000488032 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
PCGF3-212ENST00000488032 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
PCGF3-212ENST00000488032 ZNF462Q96JM2 2506 aa2.03□□□□□ -2.08
PCGF3-212ENST00000488032 EP300Q09472 2414 aaPredicted RBP2.02□□□□□ -2.09
PCGF3-212ENST00000488032 GOLGB1Q14789 3259 aaKnown RBP2.02□□□□□ -2.09
PCGF3-212ENST00000488032 GVINP1Q7Z2Y8 2422 aa2□□□□□ -2.09
PCGF3-212ENST00000488032 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
PCGF3-212ENST00000488032 KRTAP13-4Q3LI77 160 aa1.99□□□□□ -2.09
PCGF3-212ENST00000488032 RP1L1Q8IWN7 2480 aaPredicted RBP1.98□□□□□ -2.09
PCGF3-212ENST00000488032 TNRC18O15417 2968 aaPredicted RBP1.98□□□□□ -2.09
PCGF3-212ENST00000488032 HTN3P15516 51 aa1.97□□□□□ -2.09
PCGF3-212ENST00000488032 ABCA2Q9BZC7 2435 aa1.97□□□□□ -2.09
PCGF3-212ENST00000488032 F8P00451 2351 aa1.96□□□□□ -2.09
PCGF3-212ENST00000488032 C2CD3Q4AC94 2353 aa1.96□□□□□ -2.09
PCGF3-212ENST00000488032 RPS29P62273 56 aaKnown RBP1.96□□□□□ -2.1
PCGF3-212ENST00000488032 VPS13AQ96RL7 3174 aa1.96□□□□□ -2.1
PCGF3-212ENST00000488032 PCNTO95613 3336 aa1.96□□□□□ -2.1
PCGF3-212ENST00000488032 JMJD1CQ15652 2540 aa1.96□□□□□ -2.1
PCGF3-212ENST00000488032 NCOR1O75376 2440 aa1.96□□□□□ -2.1
PCGF3-212ENST00000488032 ZZEF1O43149 2961 aa1.95□□□□□ -2.1
PCGF3-212ENST00000488032 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
PCGF3-212ENST00000488032 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
PCGF3-212ENST00000488032 NOTCH2Q04721 2471 aa1.95□□□□□ -2.1
PCGF3-212ENST00000488032 CCDC168Q8NDH2 2452 aa1.95□□□□□ -2.1
PCGF3-212ENST00000488032 UBR5O95071 2799 aaPredicted RBP1.94□□□□□ -2.1
PCGF3-212ENST00000488032 NBASA2RRP1 2371 aa1.94□□□□□ -2.1
PCGF3-212ENST00000488032 UTRNP46939 3433 aa1.94□□□□□ -2.1
PCGF3-212ENST00000488032 SPG11Q96JI7 2443 aa1.93□□□□□ -2.1
PCGF3-212ENST00000488032 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
PCGF3-212ENST00000488032 ASH1LQ9NR48 2969 aaKnown RBP1.93□□□□□ -2.1
PCGF3-212ENST00000488032 MUC6Q6W4X9 2439 aa1.92□□□□□ -2.1
PCGF3-212ENST00000488032 COL6A5A8TX70 2615 aa1.92□□□□□ -2.1
PCGF3-212ENST00000488032 NCOR2Q9Y618 2525 aa1.91□□□□□ -2.1
PCGF3-212ENST00000488032 DEFB135Q30KP9 77 aa1.91□□□□□ -2.1
PCGF3-212ENST00000488032 CFAP54Q96N23 3096 aa1.91□□□□□ -2.1
PCGF3-212ENST00000488032 PRUNE2Q8WUY3 3088 aa1.9□□□□□ -2.11
PCGF3-212ENST00000488032 ANKHD1Q8IWZ3 2542 aaKnown RBP1.9□□□□□ -2.11
PCGF3-212ENST00000488032 NAV2Q8IVL1 2488 aa1.9□□□□□ -2.11
PCGF3-212ENST00000488032 CENPFP49454 3210 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 CEP290O15078 2479 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 TNP1P09430 55 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 RANBP2P49792 3224 aaKnown RBP1.89□□□□□ -2.11
PCGF3-212ENST00000488032 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 CREBBPQ92793 2442 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 OTOGQ6ZRI0 2925 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 NBEAQ8NFP9 2946 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 CHD6Q8TD26 2715 aa1.89□□□□□ -2.11
PCGF3-212ENST00000488032 BAHCC1Q9P281 2608 aa1.88□□□□□ -2.11
PCGF3-212ENST00000488032 CELSR2Q9HCU4 2923 aa1.88□□□□□ -2.11
PCGF3-212ENST00000488032 DSPP15924 2871 aaKnown RBP1.88□□□□□ -2.11
PCGF3-212ENST00000488032 MAP1AP78559 2803 aaPredicted RBP1.87□□□□□ -2.11
PCGF3-212ENST00000488032 PRRC2CQ9Y520 2896 aaKnown RBP1.87□□□□□ -2.11
PCGF3-212ENST00000488032 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
PCGF3-212ENST00000488032 CFAP47Q6ZTR5 3102 aa1.86□□□□□ -2.11
PCGF3-212ENST00000488032 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
PCGF3-212ENST00000488032 REV3LO60673 3130 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms