RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 WWC2-AS2Q96NR7 200 aa7.5□□□□□ -1.21
TRA2B-214ENST00000487615 SPRR1AP35321 89 aa7.5□□□□□ -1.21
TRA2B-214ENST00000487615 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
TRA2B-214ENST00000487615 CELSR1Q9NYQ6 3014 aa7.49□□□□□ -1.21
TRA2B-214ENST00000487615 H3BPC8 53 aa7.47□□□□□ -1.21
TRA2B-214ENST00000487615 CSMD1Q96PZ7 3565 aa7.47□□□□□ -1.21
TRA2B-214ENST00000487615 TRAV22A0A0B4J277 110 aa7.47□□□□□ -1.21
TRA2B-214ENST00000487615 ZNF861PO60384 105 aa7.46□□□□□ -1.21
TRA2B-214ENST00000487615 LIMD2Q9BT23 127 aa7.46□□□□□ -1.21
TRA2B-214ENST00000487615 H7BZZ5 65 aa7.46□□□□□ -1.21
TRA2B-214ENST00000487615 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
TRA2B-214ENST00000487615 SPRR4Q96PI1 79 aa7.45□□□□□ -1.22
TRA2B-214ENST00000487615 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
TRA2B-214ENST00000487615 PSORS1C2Q9UIG4 136 aa7.44□□□□□ -1.22
TRA2B-214ENST00000487615 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
TRA2B-214ENST00000487615 RETNLBQ9BQ08 111 aa7.4□□□□□ -1.22
TRA2B-214ENST00000487615 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
TRA2B-214ENST00000487615 SPACA4Q8TDM5 124 aa7.4□□□□□ -1.22
TRA2B-214ENST00000487615 A6NED7 52 aa7.4□□□□□ -1.23
TRA2B-214ENST00000487615 C4orf26Q17RF5 130 aa7.4□□□□□ -1.23
TRA2B-214ENST00000487615 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.39□□□□□ -1.23
TRA2B-214ENST00000487615 PSPHP1O15172 72 aa7.39□□□□□ -1.23
TRA2B-214ENST00000487615 SEC61GP60059 68 aa7.39□□□□□ -1.23
TRA2B-214ENST00000487615 TENM4Q6N022 2769 aa7.39□□□□□ -1.23
TRA2B-214ENST00000487615 DSCR10P59022 87 aa7.39□□□□□ -1.23
TRA2B-214ENST00000487615 OCR1Q9BZK8 76 aa7.39□□□□□ -1.23
TRA2B-214ENST00000487615 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
TRA2B-214ENST00000487615 BSNQ9UPA5 3926 aa7.38□□□□□ -1.23
TRA2B-214ENST00000487615 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
TRA2B-214ENST00000487615 STAB2Q8WWQ8 2551 aa7.38□□□□□ -1.23
TRA2B-214ENST00000487615 IGLV7-43P04211 117 aa7.37□□□□□ -1.23
TRA2B-214ENST00000487615 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
TRA2B-214ENST00000487615 MRPL34Q9BQ48 92 aaKnown RBP7.37□□□□□ -1.23
TRA2B-214ENST00000487615 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
TRA2B-214ENST00000487615 PDZD2O15018 2839 aa7.36□□□□□ -1.23
TRA2B-214ENST00000487615 SPENQ96T58 3664 aaKnown RBP7.36□□□□□ -1.23
TRA2B-214ENST00000487615 SVEP1Q4LDE5 3571 aa7.35□□□□□ -1.23
TRA2B-214ENST00000487615 A0A1B0GVX0 72 aa7.35□□□□□ -1.23
TRA2B-214ENST00000487615 KRTAP4-16G5E9R7 235 aaPredicted RBP7.35□□□□□ -1.23
TRA2B-214ENST00000487615 LINC00313P59037 77 aa7.35□□□□□ -1.23
TRA2B-214ENST00000487615 TYMSOSQ8TAI1 123 aa7.35□□□□□ -1.23
TRA2B-214ENST00000487615 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
TRA2B-214ENST00000487615 TNP2Q05952 138 aa7.33□□□□□ -1.24
TRA2B-214ENST00000487615 SPRR1BP22528 89 aa7.32□□□□□ -1.24
TRA2B-214ENST00000487615 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
TRA2B-214ENST00000487615 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
TRA2B-214ENST00000487615 CYSTM1Q9H1C7 97 aa7.31□□□□□ -1.24
TRA2B-214ENST00000487615 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
TRA2B-214ENST00000487615 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
TRA2B-214ENST00000487615 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
TRA2B-214ENST00000487615 PLAC8Q9NZF1 115 aa7.28□□□□□ -1.24
TRA2B-214ENST00000487615 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
TRA2B-214ENST00000487615 FAM229AH3BQW9 127 aa7.28□□□□□ -1.24
TRA2B-214ENST00000487615 TENM1Q9UKZ4 2725 aa7.27□□□□□ -1.24
TRA2B-214ENST00000487615 ACYP2P14621 99 aa7.26□□□□□ -1.25
TRA2B-214ENST00000487615 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
TRA2B-214ENST00000487615 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
TRA2B-214ENST00000487615 SVIPQ8NHG7 77 aa7.23□□□□□ -1.25
TRA2B-214ENST00000487615 TENM3Q9P273 2699 aa7.23□□□□□ -1.25
TRA2B-214ENST00000487615 SPAG11AQ6PDA7 123 aa7.23□□□□□ -1.25
TRA2B-214ENST00000487615 COA5Q86WW8 74 aa7.23□□□□□ -1.25
TRA2B-214ENST00000487615 VWFP04275 2813 aa7.22□□□□□ -1.25
TRA2B-214ENST00000487615 LINC00472Q9H8W2 130 aa7.22□□□□□ -1.25
TRA2B-214ENST00000487615 PANO1I0J062 215 aa7.21□□□□□ -1.25
TRA2B-214ENST00000487615 Q96NJ1 140 aa7.21□□□□□ -1.26
TRA2B-214ENST00000487615 SPINK1P00995 79 aa7.21□□□□□ -1.26
TRA2B-214ENST00000487615 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
TRA2B-214ENST00000487615 OTOGQ6ZRI0 2925 aa7.21□□□□□ -1.26
TRA2B-214ENST00000487615 PMAIP1Q13794 54 aa7.21□□□□□ -1.26
TRA2B-214ENST00000487615 CD164Q04900 197 aa7.2□□□□□ -1.26
TRA2B-214ENST00000487615 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
TRA2B-214ENST00000487615 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
TRA2B-214ENST00000487615 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
TRA2B-214ENST00000487615 LINC00336Q6ZUF6 198 aa7.17□□□□□ -1.26
TRA2B-214ENST00000487615 A8MUN3 132 aa7.17□□□□□ -1.26
TRA2B-214ENST00000487615 SMR3BP02814 79 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-214ENST00000487615 Q6ZR54 194 aa7.16□□□□□ -1.26
TRA2B-214ENST00000487615 Q6ZRN7 208 aaPredicted RBP7.16□□□□□ -1.26
TRA2B-214ENST00000487615 NBPF19A0A087WUL8 3843 aa7.15□□□□□ -1.26
TRA2B-214ENST00000487615 CSMD2Q7Z408 3487 aa7.15□□□□□ -1.27
TRA2B-214ENST00000487615 KRTAP11-1Q8IUC1 163 aa7.15□□□□□ -1.27
TRA2B-214ENST00000487615 A0A1B0GU69 56 aa7.14□□□□□ -1.27
TRA2B-214ENST00000487615 CYP4F30PQ9H0H9 118 aa7.14□□□□□ -1.27
TRA2B-214ENST00000487615 FAM229BQ4G0N7 80 aa7.13□□□□□ -1.27
TRA2B-214ENST00000487615 LINC00483Q53H64 154 aa7.12□□□□□ -1.27
TRA2B-214ENST00000487615 K7ERS5 55 aa7.11□□□□□ -1.27
TRA2B-214ENST00000487615 KRTAP10-2P60368 255 aa7.09□□□□□ -1.27
TRA2B-214ENST00000487615 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
TRA2B-214ENST00000487615 OXTP01178 125 aa7.07□□□□□ -1.28
TRA2B-214ENST00000487615 Q5XG85 94 aa7.07□□□□□ -1.28
TRA2B-214ENST00000487615 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-214ENST00000487615 CUBNO60494 3623 aa7.06□□□□□ -1.28
TRA2B-214ENST00000487615 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-214ENST00000487615 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
TRA2B-214ENST00000487615 Q1T7F1 81 aa7.04□□□□□ -1.28
TRA2B-214ENST00000487615 C9orf92A6NGG3 77 aa7.04□□□□□ -1.28
TRA2B-214ENST00000487615 FBN1P35555 2871 aaKnown RBP7.04□□□□□ -1.28
TRA2B-214ENST00000487615 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
TRA2B-214ENST00000487615 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
TRA2B-214ENST00000487615 ATP11AUNQ6ZP68 121 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms