RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CFAP54Q96N23 3096 aa2.82□□□□□ -1.96
COPS3-209ENST00000486810 FLG2Q5D862 2391 aaPredicted RBP2.82□□□□□ -1.96
COPS3-209ENST00000486810 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
COPS3-209ENST00000486810 SPTBN2O15020 2390 aa2.81□□□□□ -1.96
COPS3-209ENST00000486810 TENM2Q9NT68 2774 aa2.81□□□□□ -1.96
COPS3-209ENST00000486810 NOTCH2Q04721 2471 aa2.8□□□□□ -1.96
COPS3-209ENST00000486810 ACACAQ13085 2346 aa2.8□□□□□ -1.96
COPS3-209ENST00000486810 LYNX1P0DP58 116 aa2.8□□□□□ -1.96
COPS3-209ENST00000486810 Q6ZRN7 208 aaPredicted RBP2.8□□□□□ -1.96
COPS3-209ENST00000486810 ZZEF1O43149 2961 aa2.79□□□□□ -1.96
COPS3-209ENST00000486810 PCNX1Q96RV3 2341 aa2.79□□□□□ -1.96
COPS3-209ENST00000486810 PRUNE2Q8WUY3 3088 aa2.78□□□□□ -1.96
COPS3-209ENST00000486810 C10orf99Q6UWK7 81 aa2.78□□□□□ -1.96
COPS3-209ENST00000486810 NOP10Q9NPE3 64 aaKnown RBP2.78□□□□□ -1.96
COPS3-209ENST00000486810 SPTA1P02549 2419 aa2.78□□□□□ -1.97
COPS3-209ENST00000486810 APC2O95996 2303 aa2.77□□□□□ -1.97
COPS3-209ENST00000486810 K7EIL1 84 aa2.77□□□□□ -1.97
COPS3-209ENST00000486810 PTPRZ1P23471 2315 aaPredicted RBP2.77□□□□□ -1.97
COPS3-209ENST00000486810 UTRNP46939 3433 aa2.77□□□□□ -1.97
COPS3-209ENST00000486810 PRO0255Q9UI72 69 aa2.76□□□□□ -1.97
COPS3-209ENST00000486810 ASH1LQ9NR48 2969 aaKnown RBP2.75□□□□□ -1.97
COPS3-209ENST00000486810 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
COPS3-209ENST00000486810 CEP250Q9BV73 2442 aa2.75□□□□□ -1.97
COPS3-209ENST00000486810 AKAP6Q13023 2319 aa2.75□□□□□ -1.97
COPS3-209ENST00000486810 VPS13AQ96RL7 3174 aa2.75□□□□□ -1.97
COPS3-209ENST00000486810 CHD6Q8TD26 2715 aa2.75□□□□□ -1.97
COPS3-209ENST00000486810 FAM186AA6NE01 2351 aa2.73□□□□□ -1.97
COPS3-209ENST00000486810 LELP1Q5T871 98 aa2.73□□□□□ -1.97
COPS3-209ENST00000486810 BRD3OSQ6XYD6 125 aa2.73□□□□□ -1.97
COPS3-209ENST00000486810 DEFB123Q8N688 67 aa2.73□□□□□ -1.97
COPS3-209ENST00000486810 U3KQA8 63 aa2.73□□□□□ -1.97
COPS3-209ENST00000486810 PKDREJQ9NTG1 2253 aa2.73□□□□□ -1.97
COPS3-209ENST00000486810 CFAP47Q6ZTR5 3102 aa2.71□□□□□ -1.98
COPS3-209ENST00000486810 RANBP2P49792 3224 aaKnown RBP2.7□□□□□ -1.98
COPS3-209ENST00000486810 SPTBN4Q9H254 2564 aa2.7□□□□□ -1.98
COPS3-209ENST00000486810 FRYLO94915 3013 aa2.7□□□□□ -1.98
COPS3-209ENST00000486810 CELSR2Q9HCU4 2923 aa2.7□□□□□ -1.98
COPS3-209ENST00000486810 PIEZO2Q9H5I5 2752 aa2.7□□□□□ -1.98
COPS3-209ENST00000486810 KALRNO60229 2985 aa2.7□□□□□ -1.98
COPS3-209ENST00000486810 FN1P02751 2386 aaKnown RBP2.69□□□□□ -1.98
COPS3-209ENST00000486810 PRLHP81277 87 aa2.69□□□□□ -1.98
COPS3-209ENST00000486810 DEFB103AP81534 67 aa2.69□□□□□ -1.98
COPS3-209ENST00000486810 DEFB136Q30KP8 78 aa2.69□□□□□ -1.98
COPS3-209ENST00000486810 MKI67P46013 3256 aaKnown RBP2.68□□□□□ -1.98
COPS3-209ENST00000486810 KRTAP10-1P60331 282 aa2.68□□□□□ -1.98
COPS3-209ENST00000486810 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
COPS3-209ENST00000486810 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
COPS3-209ENST00000486810 UBE2DNLQ8IWF7 75 aa2.68□□□□□ -1.98
COPS3-209ENST00000486810 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
COPS3-209ENST00000486810 SZT2Q5T011 3432 aa2.67□□□□□ -1.98
COPS3-209ENST00000486810 FRYQ5TBA9 3013 aa2.66□□□□□ -1.98
COPS3-209ENST00000486810 MAP1BP46821 2468 aaKnown RBP2.66□□□□□ -1.98
COPS3-209ENST00000486810 UBR5O95071 2799 aaPredicted RBP2.66□□□□□ -1.98
COPS3-209ENST00000486810 GPR179Q6PRD1 2367 aa2.65□□□□□ -1.98
COPS3-209ENST00000486810 WDFY4Q6ZS81 3184 aa2.65□□□□□ -1.99
COPS3-209ENST00000486810 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
COPS3-209ENST00000486810 AKAP13Q12802 2813 aa2.64□□□□□ -1.99
COPS3-209ENST00000486810 GVINP1Q7Z2Y8 2422 aa2.64□□□□□ -1.99
COPS3-209ENST00000486810 DSPP15924 2871 aaKnown RBP2.64□□□□□ -1.99
COPS3-209ENST00000486810 SPINK1P00995 79 aa2.63□□□□□ -1.99
COPS3-209ENST00000486810 TRIOO75962 3097 aa2.63□□□□□ -1.99
COPS3-209ENST00000486810 OTOGLQ3ZCN5 2332 aa2.63□□□□□ -1.99
COPS3-209ENST00000486810 DNAH12Q6ZR08 3092 aa2.62□□□□□ -1.99
COPS3-209ENST00000486810 ITPR1Q14643 2758 aa2.62□□□□□ -1.99
COPS3-209ENST00000486810 SPTBN5Q9NRC6 3674 aaKnown RBP2.62□□□□□ -1.99
COPS3-209ENST00000486810 S4R3F8 94 aa2.62□□□□□ -1.99
COPS3-209ENST00000486810 MAP1AP78559 2803 aaPredicted RBP2.62□□□□□ -1.99
COPS3-209ENST00000486810 BOD1L1Q8NFC6 3051 aa2.62□□□□□ -1.99
COPS3-209ENST00000486810 REV3LO60673 3130 aa2.62□□□□□ -1.99
COPS3-209ENST00000486810 C2CD3Q4AC94 2353 aa2.61□□□□□ -1.99
COPS3-209ENST00000486810 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
COPS3-209ENST00000486810 CSPG4Q6UVK1 2322 aa2.6□□□□□ -1.99
COPS3-209ENST00000486810 UNC80Q8N2C7 3258 aa2.6□□□□□ -1.99
COPS3-209ENST00000486810 LRBAP50851 2863 aa2.6□□□□□ -1.99
COPS3-209ENST00000486810 KRTAP10-10P60014 251 aa2.6□□□□□ -1.99
COPS3-209ENST00000486810 NCOR1O75376 2440 aa2.59□□□□□ -1.99
COPS3-209ENST00000486810 RP1L1Q8IWN7 2480 aaPredicted RBP2.59□□□□□ -1.99
COPS3-209ENST00000486810 A0A096LPF7 62 aa2.59□□□□□ -1.99
COPS3-209ENST00000486810 CACNA1HO95180 2353 aa2.59□□□□□ -2
COPS3-209ENST00000486810 HIVEP2P31629 2446 aa2.59□□□□□ -2
COPS3-209ENST00000486810 FAM208BQ5VWN6 2430 aa2.58□□□□□ -2
COPS3-209ENST00000486810 CHD9Q3L8U1 2897 aa2.58□□□□□ -2
COPS3-209ENST00000486810 H3BNG1 76 aa2.58□□□□□ -2
COPS3-209ENST00000486810 USP34Q70CQ2 3546 aa2.58□□□□□ -2
COPS3-209ENST00000486810 VWFP04275 2813 aa2.58□□□□□ -2
COPS3-209ENST00000486810 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
COPS3-209ENST00000486810 ROS1P08922 2347 aa2.57□□□□□ -2
COPS3-209ENST00000486810 TRANK1O15050 2925 aa2.57□□□□□ -2
COPS3-209ENST00000486810 HTTP42858 3142 aa2.57□□□□□ -2
COPS3-209ENST00000486810 C5orf42Q9H799 3197 aa2.57□□□□□ -2
COPS3-209ENST00000486810 LAMA2P24043 3122 aaKnown RBP2.56□□□□□ -2
COPS3-209ENST00000486810 XIRP2A4UGR9 3374 aa2.56□□□□□ -2
COPS3-209ENST00000486810 EP300Q09472 2414 aaPredicted RBP2.56□□□□□ -2
COPS3-209ENST00000486810 KRTAP13-1Q8IUC0 172 aa2.56□□□□□ -2
COPS3-209ENST00000486810 APLNQ9ULZ1 77 aa2.55□□□□□ -2
COPS3-209ENST00000486810 DMDP11532 3685 aa2.54□□□□□ -2
COPS3-209ENST00000486810 LINC01556Q5JQF7 62 aa2.54□□□□□ -2
COPS3-209ENST00000486810 DMXL1Q9Y485 3027 aa2.54□□□□□ -2
COPS3-209ENST00000486810 ZNF462Q96JM2 2506 aa2.53□□□□□ -2
COPS3-209ENST00000486810 SPEGQ15772 3267 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms