RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 FABP2P12104 132 aa7.57□□□□□ -1.2
HDAC6-229ENST00000486665 TRACP01848 142 aa7.56□□□□□ -1.2
HDAC6-229ENST00000486665 ATXN8Q156A1 80 aa7.56□□□□□ -1.2
HDAC6-229ENST00000486665 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
HDAC6-229ENST00000486665 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
HDAC6-229ENST00000486665 SMIM29Q86T20 159 aa7.56□□□□□ -1.2
HDAC6-229ENST00000486665 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
HDAC6-229ENST00000486665 LINC01600Q96MT4 127 aa7.56□□□□□ -1.2
HDAC6-229ENST00000486665 KRTAP13-2Q52LG2 175 aa7.55□□□□□ -1.2
HDAC6-229ENST00000486665 TRBV20-1A0A075B6N2 111 aa7.54□□□□□ -1.2
HDAC6-229ENST00000486665 DNAL4O96015 105 aa7.54□□□□□ -1.2
HDAC6-229ENST00000486665 CRYGAP11844 174 aa7.54□□□□□ -1.2
HDAC6-229ENST00000486665 C3orf22Q8N5N4 141 aa7.54□□□□□ -1.2
HDAC6-229ENST00000486665 KRTAP10-8P60410 259 aa7.53□□□□□ -1.2
HDAC6-229ENST00000486665 OCIAD2Q56VL3 154 aa7.53□□□□□ -1.2
HDAC6-229ENST00000486665 SPCS1Q9Y6A9 102 aa7.53□□□□□ -1.2
HDAC6-229ENST00000486665 ORMDL1Q9P0S3 153 aa7.52□□□□□ -1.21
HDAC6-229ENST00000486665 IGLV9-49A0A0B4J1Y8 123 aa7.51□□□□□ -1.21
HDAC6-229ENST00000486665 H3BMG7 143 aa7.51□□□□□ -1.21
HDAC6-229ENST00000486665 LAMTOR3Q9UHA4 124 aa7.51□□□□□ -1.21
HDAC6-229ENST00000486665 BAALC-AS2P0C853 105 aa7.5□□□□□ -1.21
HDAC6-229ENST00000486665 PPDPFLQ8WWR9 84 aa7.5□□□□□ -1.21
HDAC6-229ENST00000486665 K7EP34 96 aa7.49□□□□□ -1.21
HDAC6-229ENST00000486665 C9JAW5 83 aa7.48□□□□□ -1.21
HDAC6-229ENST00000486665 MOBPQ13875 183 aa7.48□□□□□ -1.21
HDAC6-229ENST00000486665 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
HDAC6-229ENST00000486665 TMEM256-PLSCR3K7ERE1 68 aa7.47□□□□□ -1.21
HDAC6-229ENST00000486665 GHRHP01286 108 aa7.47□□□□□ -1.21
HDAC6-229ENST00000486665 NDUFV3P56181 108 aaKnown RBP7.47□□□□□ -1.21
HDAC6-229ENST00000486665 C9orf153Q5TBE3 101 aa7.47□□□□□ -1.21
HDAC6-229ENST00000486665 MTURNQ8N3F0 131 aa7.47□□□□□ -1.21
HDAC6-229ENST00000486665 H3BQ85 93 aa7.46□□□□□ -1.22
HDAC6-229ENST00000486665 A0A0G2JQZ4 141 aa7.45□□□□□ -1.22
HDAC6-229ENST00000486665 UBE2V1Q13404 147 aa7.45□□□□□ -1.22
HDAC6-229ENST00000486665 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
HDAC6-229ENST00000486665 A0A1B0GV90 55 aa7.44□□□□□ -1.22
HDAC6-229ENST00000486665 Q8NBF4 154 aa7.44□□□□□ -1.22
HDAC6-229ENST00000486665 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
HDAC6-229ENST00000486665 A0A1B0GV72 72 aa7.43□□□□□ -1.22
HDAC6-229ENST00000486665 F8WEM9 126 aa7.43□□□□□ -1.22
HDAC6-229ENST00000486665 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-229ENST00000486665 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
HDAC6-229ENST00000486665 ANKRD29Q8N6D5 301 aa7.43□□□□□ -1.22
HDAC6-229ENST00000486665 PRO0461Q9UI25 63 aa7.43□□□□□ -1.22
HDAC6-229ENST00000486665 LPAP08519 4548 aa7.43□□□□□ -1.22
HDAC6-229ENST00000486665 H3BT86 120 aa7.41□□□□□ -1.22
HDAC6-229ENST00000486665 IGFL1Q6UW32 110 aa7.4□□□□□ -1.22
HDAC6-229ENST00000486665 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
HDAC6-229ENST00000486665 Q6JHZ5 121 aa7.38□□□□□ -1.23
HDAC6-229ENST00000486665 HRCT1Q6UXD1 115 aa7.38□□□□□ -1.23
HDAC6-229ENST00000486665 RBM3P98179 157 aaKnown RBP7.36□□□□□ -1.23
HDAC6-229ENST00000486665 OBSCN-AS1Q96MR7 158 aa7.36□□□□□ -1.23
HDAC6-229ENST00000486665 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
HDAC6-229ENST00000486665 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
HDAC6-229ENST00000486665 A0A1W2PNM2 257 aa7.34□□□□□ -1.23
HDAC6-229ENST00000486665 F8W1H4 67 aa7.34□□□□□ -1.23
HDAC6-229ENST00000486665 JMJD7-PLA2G4BH0Y9G9 81 aa7.34□□□□□ -1.23
HDAC6-229ENST00000486665 TRBV7-4A0A0J9YYF1 115 aa7.33□□□□□ -1.24
HDAC6-229ENST00000486665 CD164Q04900 197 aa7.33□□□□□ -1.24
HDAC6-229ENST00000486665 SPINK1P00995 79 aa7.32□□□□□ -1.24
HDAC6-229ENST00000486665 DSCR8Q96T75 97 aa7.32□□□□□ -1.24
HDAC6-229ENST00000486665 C14orf132Q9NPU4 83 aa7.32□□□□□ -1.24
HDAC6-229ENST00000486665 LOC110117498A0A087WWA1 95 aa7.3□□□□□ -1.24
HDAC6-229ENST00000486665 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
HDAC6-229ENST00000486665 CCKP06307 115 aa7.29□□□□□ -1.24
HDAC6-229ENST00000486665 Q6Q795 121 aa7.29□□□□□ -1.24
HDAC6-229ENST00000486665 Q6ZQT0 140 aa7.29□□□□□ -1.24
HDAC6-229ENST00000486665 TEN1Q86WV5 123 aa7.29□□□□□ -1.24
HDAC6-229ENST00000486665 ETDBQ3ZM63 59 aa7.28□□□□□ -1.24
HDAC6-229ENST00000486665 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
HDAC6-229ENST00000486665 VPS25Q9BRG1 176 aa7.27□□□□□ -1.25
HDAC6-229ENST00000486665 MUC2Q02817 5179 aa7.25□□□□□ -1.25
HDAC6-229ENST00000486665 PDE6GP18545 87 aa7.25□□□□□ -1.25
HDAC6-229ENST00000486665 A0A087WSZ3 146 aa7.24□□□□□ -1.25
HDAC6-229ENST00000486665 Q5XG85 94 aa7.24□□□□□ -1.25
HDAC6-229ENST00000486665 RETNLBQ9BQ08 111 aa7.24□□□□□ -1.25
HDAC6-229ENST00000486665 LIMD2Q9BT23 127 aa7.23□□□□□ -1.25
HDAC6-229ENST00000486665 ASB16-AS1Q495Z4 193 aa7.2□□□□□ -1.26
HDAC6-229ENST00000486665 C1orf195Q5TG92 126 aa7.2□□□□□ -1.26
HDAC6-229ENST00000486665 A0A1B0GW54 56 aa7.17□□□□□ -1.26
HDAC6-229ENST00000486665 C21orf62-AS1Q17RA5 79 aa7.17□□□□□ -1.26
HDAC6-229ENST00000486665 SS18L2Q9UHA2 77 aa7.17□□□□□ -1.26
HDAC6-229ENST00000486665 PRR4Q16378 134 aa7.16□□□□□ -1.26
HDAC6-229ENST00000486665 Q96NJ1 140 aa7.16□□□□□ -1.26
HDAC6-229ENST00000486665 DEFB116Q30KQ4 102 aa7.14□□□□□ -1.27
HDAC6-229ENST00000486665 LINC00472Q9H8W2 130 aa7.14□□□□□ -1.27
HDAC6-229ENST00000486665 FP248Q71RG6 208 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-229ENST00000486665 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
HDAC6-229ENST00000486665 LINC00846Q9NV44 126 aa7.12□□□□□ -1.27
HDAC6-229ENST00000486665 NREPQ16612 68 aa7.11□□□□□ -1.27
HDAC6-229ENST00000486665 IGKV4-1P06312 121 aa7.09□□□□□ -1.27
HDAC6-229ENST00000486665 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
HDAC6-229ENST00000486665 Q6ZVQ6 151 aa7.08□□□□□ -1.28
HDAC6-229ENST00000486665 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
HDAC6-229ENST00000486665 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
HDAC6-229ENST00000486665 SIGMAR1Q99720 223 aa7.05□□□□□ -1.28
HDAC6-229ENST00000486665 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
HDAC6-229ENST00000486665 J3KT08 172 aa7.04□□□□□ -1.28
HDAC6-229ENST00000486665 ACYP1P07311 99 aa7.04□□□□□ -1.28
HDAC6-229ENST00000486665 UBL5Q9BZL1 73 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms