RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 TPRXLQ17RH7 258 aa11.14□□□□□ -0.63
LIMK1-206ENST00000486361 CDIP1Q9H305 208 aa11.13□□□□□ -0.63
LIMK1-206ENST00000486361 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-206ENST00000486361 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
LIMK1-206ENST00000486361 K7ERJ3 54 aa11.1□□□□□ -0.63
LIMK1-206ENST00000486361 RNF213Q63HN8 5207 aa11.1□□□□□ -0.63
LIMK1-206ENST00000486361 H0YGX0 51 aa11.09□□□□□ -0.63
LIMK1-206ENST00000486361 F8WEM9 126 aa11.07□□□□□ -0.64
LIMK1-206ENST00000486361 CD164Q04900 197 aa11.07□□□□□ -0.64
LIMK1-206ENST00000486361 KRTAP13-3Q3SY46 172 aa11.07□□□□□ -0.64
LIMK1-206ENST00000486361 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
LIMK1-206ENST00000486361 TRIAP1O43715 76 aa11.05□□□□□ -0.64
LIMK1-206ENST00000486361 SNHG12Q9BXW3 62 aa11.04□□□□□ -0.64
LIMK1-206ENST00000486361 OCIAD2Q56VL3 154 aa11.03□□□□□ -0.64
LIMK1-206ENST00000486361 SNCGO76070 127 aa11.02□□□□□ -0.65
LIMK1-206ENST00000486361 PSMB2P49721 201 aa11.01□□□□□ -0.65
LIMK1-206ENST00000486361 CLEC2BQ92478 149 aa11.01□□□□□ -0.65
LIMK1-206ENST00000486361 IGFL1Q6UW32 110 aa11□□□□□ -0.65
LIMK1-206ENST00000486361 PPDPFLQ8WWR9 84 aa11□□□□□ -0.65
LIMK1-206ENST00000486361 IGLV8-61A0A075B6I0 122 aa10.99□□□□□ -0.65
LIMK1-206ENST00000486361 H3BUT2 72 aa10.99□□□□□ -0.65
LIMK1-206ENST00000486361 Q6JHZ5 121 aa10.98□□□□□ -0.65
LIMK1-206ENST00000486361 MUC17Q685J3 4493 aa10.96□□□□□ -0.65
LIMK1-206ENST00000486361 A0A1B0GX51 115 aa10.96□□□□□ -0.65
LIMK1-206ENST00000486361 SMIM6P0DI80 62 aa10.96□□□□□ -0.65
LIMK1-206ENST00000486361 Q5XG85 94 aa10.96□□□□□ -0.65
LIMK1-206ENST00000486361 C1orf195Q5TG92 126 aa10.95□□□□□ -0.66
LIMK1-206ENST00000486361 NDUFV3P56181 108 aaKnown RBP10.94□□□□□ -0.66
LIMK1-206ENST00000486361 FABP2P12104 132 aa10.93□□□□□ -0.66
LIMK1-206ENST00000486361 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
LIMK1-206ENST00000486361 COX6CP09669 75 aa10.92□□□□□ -0.66
LIMK1-206ENST00000486361 TRBV7-7A0A0K0K1E9 115 aa10.91□□□□□ -0.66
LIMK1-206ENST00000486361 C9orf92A6NGG3 77 aa10.9□□□□□ -0.66
LIMK1-206ENST00000486361 TCL1BO95988 128 aa10.9□□□□□ -0.66
LIMK1-206ENST00000486361 H3BMG7 143 aa10.88□□□□□ -0.67
LIMK1-206ENST00000486361 DNAL4O96015 105 aa10.88□□□□□ -0.67
LIMK1-206ENST00000486361 SCGB1C2P0DMR2 95 aa10.88□□□□□ -0.67
LIMK1-206ENST00000486361 XP32Q5T750 250 aa10.88□□□□□ -0.67
LIMK1-206ENST00000486361 MUC2Q02817 5179 aa10.88□□□□□ -0.67
LIMK1-206ENST00000486361 GHRHP01286 108 aa10.86□□□□□ -0.67
LIMK1-206ENST00000486361 ORMDL1Q9P0S3 153 aa10.86□□□□□ -0.67
LIMK1-206ENST00000486361 M0R143 59 aa10.85□□□□□ -0.67
LIMK1-206ENST00000486361 A0A1B0GV72 72 aa10.84□□□□□ -0.67
LIMK1-206ENST00000486361 ASB16-AS1Q495Z4 193 aa10.84□□□□□ -0.67
LIMK1-206ENST00000486361 NAA38Q9BRA0 125 aaKnown RBP10.83□□□□□ -0.68
LIMK1-206ENST00000486361 TSTD3H0UI37 97 aa10.81□□□□□ -0.68
LIMK1-206ENST00000486361 LST1O00453 97 aa10.8□□□□□ -0.68
LIMK1-206ENST00000486361 SEC61BP60468 96 aaKnown RBP10.8□□□□□ -0.68
LIMK1-206ENST00000486361 TEN1Q86WV5 123 aa10.79□□□□□ -0.68
LIMK1-206ENST00000486361 TMEM256-PLSCR3K7ERE1 68 aa10.78□□□□□ -0.68
LIMK1-206ENST00000486361 TRACP01848 142 aa10.78□□□□□ -0.68
LIMK1-206ENST00000486361 Q6Q795 121 aa10.78□□□□□ -0.68
LIMK1-206ENST00000486361 KRTAP4-1Q9BYQ7 146 aa10.77□□□□□ -0.69
LIMK1-206ENST00000486361 A0A1W2PNM2 257 aa10.76□□□□□ -0.69
LIMK1-206ENST00000486361 H3BQ85 93 aa10.76□□□□□ -0.69
LIMK1-206ENST00000486361 BATFQ16520 125 aa10.76□□□□□ -0.69
LIMK1-206ENST00000486361 A0A087WSZ3 146 aa10.75□□□□□ -0.69
LIMK1-206ENST00000486361 ANKRD29Q8N6D5 301 aa10.75□□□□□ -0.69
LIMK1-206ENST00000486361 UBE2V1Q13404 147 aa10.72□□□□□ -0.69
LIMK1-206ENST00000486361 SS18L2Q9UHA2 77 aa10.71□□□□□ -0.69
LIMK1-206ENST00000486361 A0A0U1RQV1 116 aa10.7□□□□□ -0.7
LIMK1-206ENST00000486361 BAALC-AS2P0C853 105 aa10.7□□□□□ -0.7
LIMK1-206ENST00000486361 PCOTHQ58A44 107 aa10.7□□□□□ -0.7
LIMK1-206ENST00000486361 ATXN8Q156A1 80 aa10.68□□□□□ -0.7
LIMK1-206ENST00000486361 Q96NJ1 140 aa10.65□□□□□ -0.7
LIMK1-206ENST00000486361 TRBV7-4A0A0J9YYF1 115 aa10.64□□□□□ -0.71
LIMK1-206ENST00000486361 CCKP06307 115 aa10.64□□□□□ -0.71
LIMK1-206ENST00000486361 RBM3P98179 157 aaKnown RBP10.64□□□□□ -0.71
LIMK1-206ENST00000486361 OBSCN-AS1Q96MR7 158 aa10.63□□□□□ -0.71
LIMK1-206ENST00000486361 FAT4Q6V0I7 4981 aa10.63□□□□□ -0.71
LIMK1-206ENST00000486361 RPL37P61927 97 aaKnown RBP10.62□□□□□ -0.71
LIMK1-206ENST00000486361 VPS25Q9BRG1 176 aa10.62□□□□□ -0.71
LIMK1-206ENST00000486361 DSCR8Q96T75 97 aa10.6□□□□□ -0.71
LIMK1-206ENST00000486361 TAX1BP3O14907 124 aa10.59□□□□□ -0.71
LIMK1-206ENST00000486361 C9orf118A6NHY6 69 aa10.57□□□□□ -0.72
LIMK1-206ENST00000486361 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
LIMK1-206ENST00000486361 LYRM7Q5U5X0 104 aa10.57□□□□□ -0.72
LIMK1-206ENST00000486361 SIGMAR1Q99720 223 aa10.56□□□□□ -0.72
LIMK1-206ENST00000486361 C9JAW5 83 aa10.55□□□□□ -0.72
LIMK1-206ENST00000486361 TRBV20-1A0A075B6N2 111 aa10.54□□□□□ -0.72
LIMK1-206ENST00000486361 IGKV4-1P06312 121 aa10.54□□□□□ -0.72
LIMK1-206ENST00000486361 LINC00472Q9H8W2 130 aa10.53□□□□□ -0.72
LIMK1-206ENST00000486361 DSCR10P59022 87 aa10.52□□□□□ -0.73
LIMK1-206ENST00000486361 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
LIMK1-206ENST00000486361 A0A1W2PPM0 123 aa10.51□□□□□ -0.73
LIMK1-206ENST00000486361 JMJD7-PLA2G4BH0Y9G9 81 aa10.49□□□□□ -0.73
LIMK1-206ENST00000486361 Q75L30 129 aa10.48□□□□□ -0.73
LIMK1-206ENST00000486361 MTURNQ8N3F0 131 aa10.48□□□□□ -0.73
LIMK1-206ENST00000486361 Q6ZQT0 140 aa10.47□□□□□ -0.73
LIMK1-206ENST00000486361 C14orf132Q9NPU4 83 aa10.47□□□□□ -0.73
LIMK1-206ENST00000486361 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
LIMK1-206ENST00000486361 NOTCH2NLQ7Z3S9 236 aa10.45□□□□□ -0.74
LIMK1-206ENST00000486361 LOC110117498A0A087WWA1 95 aa10.44□□□□□ -0.74
LIMK1-206ENST00000486361 LINC00313P59037 77 aa10.43□□□□□ -0.74
LIMK1-206ENST00000486361 C20orf166-AS1Q96NR2 134 aa10.42□□□□□ -0.74
LIMK1-206ENST00000486361 IGHV6-1A0A0B4J1U7 121 aa10.41□□□□□ -0.74
LIMK1-206ENST00000486361 A8MUU9 505 aa10.41□□□□□ -0.74
LIMK1-206ENST00000486361 KRTAP19-2Q3LHN2 52 aa10.41□□□□□ -0.74
LIMK1-206ENST00000486361 LCE2CQ5TA81 110 aa10.41□□□□□ -0.74
LIMK1-206ENST00000486361 PDE6GP18545 87 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms