RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ALMS1Q8TCU4 4167 aa7.42□□□□□ -1.22
PKP4-213ENST00000486254 IGLV5-52A0A0A0MRZ9 124 aa7.42□□□□□ -1.22
PKP4-213ENST00000486254 UBE2AP49459 152 aa7.42□□□□□ -1.22
PKP4-213ENST00000486254 HIGD2AQ9BW72 106 aa7.41□□□□□ -1.22
PKP4-213ENST00000486254 A0A1W2PNM2 257 aa7.4□□□□□ -1.22
PKP4-213ENST00000486254 C3orf22Q8N5N4 141 aa7.4□□□□□ -1.22
PKP4-213ENST00000486254 CRYGAP11844 174 aa7.39□□□□□ -1.23
PKP4-213ENST00000486254 KMT2AQ03164 3969 aa7.39□□□□□ -1.23
PKP4-213ENST00000486254 TGP01266 2768 aa7.39□□□□□ -1.23
PKP4-213ENST00000486254 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
PKP4-213ENST00000486254 HAMPP81172 84 aa7.37□□□□□ -1.23
PKP4-213ENST00000486254 DPH3Q96FX2 82 aa7.37□□□□□ -1.23
PKP4-213ENST00000486254 NREPQ16612 68 aa7.37□□□□□ -1.23
PKP4-213ENST00000486254 DNAH17Q9UFH2 4485 aa7.36□□□□□ -1.23
PKP4-213ENST00000486254 HECTD4Q9Y4D8 3996 aa7.36□□□□□ -1.23
PKP4-213ENST00000486254 RPL37AP61513 92 aaKnown RBP7.36□□□□□ -1.23
PKP4-213ENST00000486254 LINC00483Q53H64 154 aa7.35□□□□□ -1.23
PKP4-213ENST00000486254 IGFL1Q6UW32 110 aa7.35□□□□□ -1.23
PKP4-213ENST00000486254 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
PKP4-213ENST00000486254 A0A087WVE0 104 aa7.34□□□□□ -1.23
PKP4-213ENST00000486254 UQCRQO14949 82 aa7.34□□□□□ -1.23
PKP4-213ENST00000486254 DNAH2Q9P225 4427 aa7.34□□□□□ -1.23
PKP4-213ENST00000486254 COX7CP15954 63 aa7.33□□□□□ -1.24
PKP4-213ENST00000486254 Q6ZSA8 131 aa7.33□□□□□ -1.24
PKP4-213ENST00000486254 SMIM20Q8N5G0 67 aa7.33□□□□□ -1.24
PKP4-213ENST00000486254 PSORS1C2Q9UIG4 136 aa7.33□□□□□ -1.24
PKP4-213ENST00000486254 SERP2Q8N6R1 65 aa7.32□□□□□ -1.24
PKP4-213ENST00000486254 BPY2O14599 106 aa7.31□□□□□ -1.24
PKP4-213ENST00000486254 ZNF861PO60384 105 aa7.31□□□□□ -1.24
PKP4-213ENST00000486254 CCDC179H3BU77 68 aa7.29□□□□□ -1.24
PKP4-213ENST00000486254 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.29□□□□□ -1.24
PKP4-213ENST00000486254 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
PKP4-213ENST00000486254 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
PKP4-213ENST00000486254 FRAS1Q86XX4 4008 aa7.26□□□□□ -1.25
PKP4-213ENST00000486254 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
PKP4-213ENST00000486254 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
PKP4-213ENST00000486254 TRAV7A0A075B6U4 112 aa7.25□□□□□ -1.25
PKP4-213ENST00000486254 SCXQ7RTU7 201 aa7.25□□□□□ -1.25
PKP4-213ENST00000486254 CIRBP-AS1Q8TBR5 109 aa7.24□□□□□ -1.25
PKP4-213ENST00000486254 A0A087WSZ3 146 aa7.23□□□□□ -1.25
PKP4-213ENST00000486254 C9orf153Q5TBE3 101 aa7.23□□□□□ -1.25
PKP4-213ENST00000486254 LINC00336Q6ZUF6 198 aa7.23□□□□□ -1.25
PKP4-213ENST00000486254 SVIPQ8NHG7 77 aa7.23□□□□□ -1.25
PKP4-213ENST00000486254 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
PKP4-213ENST00000486254 DSCR10P59022 87 aa7.22□□□□□ -1.25
PKP4-213ENST00000486254 FAM30AQ9NZY2 134 aa7.21□□□□□ -1.25
PKP4-213ENST00000486254 LCE6AA0A183 80 aa7.2□□□□□ -1.26
PKP4-213ENST00000486254 J3KT08 172 aa7.2□□□□□ -1.26
PKP4-213ENST00000486254 KRTAP10-1P60331 282 aa7.2□□□□□ -1.26
PKP4-213ENST00000486254 XP32Q5T750 250 aa7.2□□□□□ -1.26
PKP4-213ENST00000486254 Q8N9L7 120 aa7.19□□□□□ -1.26
PKP4-213ENST00000486254 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
PKP4-213ENST00000486254 SS18L2Q9UHA2 77 aa7.19□□□□□ -1.26
PKP4-213ENST00000486254 A0A0G2JQZ4 141 aa7.18□□□□□ -1.26
PKP4-213ENST00000486254 DNAH11Q96DT5 4516 aa7.18□□□□□ -1.26
PKP4-213ENST00000486254 DNAH8Q96JB1 4490 aa7.18□□□□□ -1.26
PKP4-213ENST00000486254 SRRM2Q9UQ35 2752 aaKnown RBP7.17□□□□□ -1.26
PKP4-213ENST00000486254 FAT2Q9NYQ8 4349 aa7.16□□□□□ -1.26
PKP4-213ENST00000486254 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
PKP4-213ENST00000486254 K7EQZ3 153 aa7.16□□□□□ -1.26
PKP4-213ENST00000486254 CD164Q04900 197 aa7.16□□□□□ -1.26
PKP4-213ENST00000486254 OCR1Q9BZK8 76 aa7.16□□□□□ -1.26
PKP4-213ENST00000486254 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
PKP4-213ENST00000486254 KLKP1Q107X0 134 aa7.15□□□□□ -1.27
PKP4-213ENST00000486254 A8MWP4 228 aa7.14□□□□□ -1.27
PKP4-213ENST00000486254 MOBPQ13875 183 aa7.14□□□□□ -1.27
PKP4-213ENST00000486254 FAM229BQ4G0N7 80 aa7.14□□□□□ -1.27
PKP4-213ENST00000486254 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
PKP4-213ENST00000486254 HCG22E2RYF7 251 aa7.13□□□□□ -1.27
PKP4-213ENST00000486254 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
PKP4-213ENST00000486254 PKD1P98161 4303 aa7.12□□□□□ -1.27
PKP4-213ENST00000486254 TMEM258P61165 79 aa7.12□□□□□ -1.27
PKP4-213ENST00000486254 NDUFC1O43677 76 aa7.1□□□□□ -1.27
PKP4-213ENST00000486254 Q96NJ1 140 aa7.1□□□□□ -1.27
PKP4-213ENST00000486254 HYDINQ4G0P3 5121 aa7.1□□□□□ -1.27
PKP4-213ENST00000486254 C20orf197Q8N268 126 aa7.09□□□□□ -1.27
PKP4-213ENST00000486254 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
PKP4-213ENST00000486254 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
PKP4-213ENST00000486254 ASB16-AS1Q495Z4 193 aa7.08□□□□□ -1.28
PKP4-213ENST00000486254 NDUFB1O75438 58 aa7.08□□□□□ -1.28
PKP4-213ENST00000486254 Q5XG85 94 aa7.07□□□□□ -1.28
PKP4-213ENST00000486254 CYSTM1Q9H1C7 97 aa7.07□□□□□ -1.28
PKP4-213ENST00000486254 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
PKP4-213ENST00000486254 TMEM254Q8TBM7 123 aa7.06□□□□□ -1.28
PKP4-213ENST00000486254 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
PKP4-213ENST00000486254 DEFB116Q30KQ4 102 aa7.05□□□□□ -1.28
PKP4-213ENST00000486254 A0A0U1RQV1 116 aa7.03□□□□□ -1.28
PKP4-213ENST00000486254 H7BZZ5 65 aa7.03□□□□□ -1.28
PKP4-213ENST00000486254 KRTAP1-4P0C5Y4 121 aa7.03□□□□□ -1.28
PKP4-213ENST00000486254 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
PKP4-213ENST00000486254 CASC2Q6XLA1 102 aa7.03□□□□□ -1.28
PKP4-213ENST00000486254 MMP24-AS1A0A0U1RRL7 71 aa7.02□□□□□ -1.29
PKP4-213ENST00000486254 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.29
PKP4-213ENST00000486254 A0A087X002 238 aa7□□□□□ -1.29
PKP4-213ENST00000486254 A0A1B0GVX0 72 aa7□□□□□ -1.29
PKP4-213ENST00000486254 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
PKP4-213ENST00000486254 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
PKP4-213ENST00000486254 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
PKP4-213ENST00000486254 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
PKP4-213ENST00000486254 WFDC13Q8IUB5 93 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms