RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 FLNAP21333 2647 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-207ENST00000485983 PRR26Q8N8Z3 221 aa6.74□□□□□ -1.33
SRGAP3-207ENST00000485983 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
SRGAP3-207ENST00000485983 LUZP6Q538Z0 58 aa6.73□□□□□ -1.33
SRGAP3-207ENST00000485983 KRTAP1-3Q8IUG1 177 aa6.73□□□□□ -1.33
SRGAP3-207ENST00000485983 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
SRGAP3-207ENST00000485983 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
SRGAP3-207ENST00000485983 KRTAP1-1Q07627 177 aa6.72□□□□□ -1.33
SRGAP3-207ENST00000485983 TEP1Q99973 2627 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-207ENST00000485983 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
SRGAP3-207ENST00000485983 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
SRGAP3-207ENST00000485983 LINC00483Q53H64 154 aa6.69□□□□□ -1.34
SRGAP3-207ENST00000485983 BOD1L1Q8NFC6 3051 aa6.68□□□□□ -1.34
SRGAP3-207ENST00000485983 FRYLO94915 3013 aa6.66□□□□□ -1.34
SRGAP3-207ENST00000485983 FREM2Q5SZK8 3169 aa6.66□□□□□ -1.34
SRGAP3-207ENST00000485983 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
SRGAP3-207ENST00000485983 TNRC18O15417 2968 aaPredicted RBP6.66□□□□□ -1.34
SRGAP3-207ENST00000485983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
SRGAP3-207ENST00000485983 MYO15AQ9UKN7 3530 aa6.65□□□□□ -1.34
SRGAP3-207ENST00000485983 HRES1P13985 223 aa6.65□□□□□ -1.35
SRGAP3-207ENST00000485983 STAB1Q9NY15 2570 aa6.64□□□□□ -1.35
SRGAP3-207ENST00000485983 FRYQ5TBA9 3013 aa6.64□□□□□ -1.35
SRGAP3-207ENST00000485983 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
SRGAP3-207ENST00000485983 REV3LO60673 3130 aa6.62□□□□□ -1.35
SRGAP3-207ENST00000485983 H7BZZ5 65 aa6.62□□□□□ -1.35
SRGAP3-207ENST00000485983 A0A1B0GU33 70 aa6.61□□□□□ -1.35
SRGAP3-207ENST00000485983 Q1T7F1 81 aa6.61□□□□□ -1.35
SRGAP3-207ENST00000485983 FLG2Q5D862 2391 aaPredicted RBP6.61□□□□□ -1.35
SRGAP3-207ENST00000485983 BAHCC1Q9P281 2608 aa6.6□□□□□ -1.35
SRGAP3-207ENST00000485983 PLAC8Q9NZF1 115 aa6.6□□□□□ -1.35
SRGAP3-207ENST00000485983 LCA10Q71F78 164 aa6.59□□□□□ -1.35
SRGAP3-207ENST00000485983 ZCCHC13Q8WW36 166 aaKnown RBP6.59□□□□□ -1.35
SRGAP3-207ENST00000485983 DMXL2Q8TDJ6 3036 aa6.59□□□□□ -1.36
SRGAP3-207ENST00000485983 S4R3F8 94 aa6.58□□□□□ -1.36
SRGAP3-207ENST00000485983 WIPF1O43516 503 aa6.56□□□□□ -1.36
SRGAP3-207ENST00000485983 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
SRGAP3-207ENST00000485983 CR1P17927 2039 aa6.56□□□□□ -1.36
SRGAP3-207ENST00000485983 IGSF10Q6WRI0 2623 aa6.56□□□□□ -1.36
SRGAP3-207ENST00000485983 ATMQ13315 3056 aa6.56□□□□□ -1.36
SRGAP3-207ENST00000485983 Q5VSD8 79 aa6.55□□□□□ -1.36
SRGAP3-207ENST00000485983 USP34Q70CQ2 3546 aa6.54□□□□□ -1.36
SRGAP3-207ENST00000485983 R4GN34 69 aa6.54□□□□□ -1.36
SRGAP3-207ENST00000485983 LCE6AA0A183 80 aa6.52□□□□□ -1.37
SRGAP3-207ENST00000485983 DMXL1Q9Y485 3027 aa6.52□□□□□ -1.37
SRGAP3-207ENST00000485983 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
SRGAP3-207ENST00000485983 COL12A1Q99715 3063 aa6.52□□□□□ -1.37
SRGAP3-207ENST00000485983 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
SRGAP3-207ENST00000485983 NOTCH1P46531 2555 aa6.5□□□□□ -1.37
SRGAP3-207ENST00000485983 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
SRGAP3-207ENST00000485983 CFAP47Q6ZTR5 3102 aa6.5□□□□□ -1.37
SRGAP3-207ENST00000485983 SPINK7P58062 85 aa6.49□□□□□ -1.37
SRGAP3-207ENST00000485983 ADGRG4Q8IZF6 3080 aa6.48□□□□□ -1.37
SRGAP3-207ENST00000485983 CHD6Q8TD26 2715 aa6.47□□□□□ -1.37
SRGAP3-207ENST00000485983 TACC2O95359 2948 aa6.46□□□□□ -1.38
SRGAP3-207ENST00000485983 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
SRGAP3-207ENST00000485983 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.38
SRGAP3-207ENST00000485983 ZZEF1O43149 2961 aa6.45□□□□□ -1.38
SRGAP3-207ENST00000485983 OXTP01178 125 aa6.44□□□□□ -1.38
SRGAP3-207ENST00000485983 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
SRGAP3-207ENST00000485983 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
SRGAP3-207ENST00000485983 SPRR1AP35321 89 aa6.43□□□□□ -1.38
SRGAP3-207ENST00000485983 LOC400499M0QZD8 3231 aa6.42□□□□□ -1.38
SRGAP3-207ENST00000485983 Q5W150 140 aa6.42□□□□□ -1.38
SRGAP3-207ENST00000485983 FLNCQ14315 2725 aa6.42□□□□□ -1.38
SRGAP3-207ENST00000485983 SPRR1BP22528 89 aa6.42□□□□□ -1.38
SRGAP3-207ENST00000485983 LRBAP50851 2863 aa6.41□□□□□ -1.38
SRGAP3-207ENST00000485983 COL6A5A8TX70 2615 aa6.41□□□□□ -1.38
SRGAP3-207ENST00000485983 UNC79Q9P2D8 2635 aa6.41□□□□□ -1.38
SRGAP3-207ENST00000485983 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
SRGAP3-207ENST00000485983 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.38
SRGAP3-207ENST00000485983 KALRNO60229 2985 aa6.4□□□□□ -1.39
SRGAP3-207ENST00000485983 NBEAL1Q6ZS30 2694 aa6.38□□□□□ -1.39
SRGAP3-207ENST00000485983 Q75L30 129 aa6.38□□□□□ -1.39
SRGAP3-207ENST00000485983 LINC01558Q9Y6Z2 57 aa6.38□□□□□ -1.39
SRGAP3-207ENST00000485983 GCN1Q92616 2671 aaKnown RBP6.37□□□□□ -1.39
SRGAP3-207ENST00000485983 M0QZ58 72 aa6.37□□□□□ -1.39
SRGAP3-207ENST00000485983 LINC00472Q9H8W2 130 aa6.36□□□□□ -1.39
SRGAP3-207ENST00000485983 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
SRGAP3-207ENST00000485983 KRTAP1-5Q9BYS1 174 aa6.35□□□□□ -1.39
SRGAP3-207ENST00000485983 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
SRGAP3-207ENST00000485983 UBR5O95071 2799 aaPredicted RBP6.34□□□□□ -1.4
SRGAP3-207ENST00000485983 WDFY3Q8IZQ1 3526 aa6.33□□□□□ -1.4
SRGAP3-207ENST00000485983 H3BS24 57 aa6.33□□□□□ -1.4
SRGAP3-207ENST00000485983 RPL37P61927 97 aaKnown RBP6.32□□□□□ -1.4
SRGAP3-207ENST00000485983 MUC3AQ02505 3323 aa6.31□□□□□ -1.4
SRGAP3-207ENST00000485983 Q8NDZ9 215 aa6.29□□□□□ -1.4
SRGAP3-207ENST00000485983 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
SRGAP3-207ENST00000485983 ITPR1Q14643 2758 aa6.29□□□□□ -1.4
SRGAP3-207ENST00000485983 ASPMQ8IZT6 3477 aa6.28□□□□□ -1.4
SRGAP3-207ENST00000485983 NBEAL2Q6ZNJ1 2754 aa6.27□□□□□ -1.41
SRGAP3-207ENST00000485983 H1FX-AS1Q4G0G2 97 aa6.26□□□□□ -1.41
SRGAP3-207ENST00000485983 DMDP11532 3685 aa6.25□□□□□ -1.41
SRGAP3-207ENST00000485983 LAMA5O15230 3695 aa6.25□□□□□ -1.41
SRGAP3-207ENST00000485983 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
SRGAP3-207ENST00000485983 ROMO1P60602 79 aa6.24□□□□□ -1.41
SRGAP3-207ENST00000485983 KRTAP26-1Q6PEX3 210 aa6.24□□□□□ -1.41
SRGAP3-207ENST00000485983 CRYBG3Q68DQ2 2970 aa6.24□□□□□ -1.41
SRGAP3-207ENST00000485983 UTP20O75691 2785 aaKnown RBP6.24□□□□□ -1.41
SRGAP3-207ENST00000485983 DCHS1Q96JQ0 3298 aa6.24□□□□□ -1.41
SRGAP3-207ENST00000485983 ITPR2Q14571 2701 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms