RNA–Protein interactions for RNA: ENST00000484821.1

POLR2B-209, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-209ENST00000484821 CFAP74Q9C0B2 1584 aa0.28□□□□□ -2.36
POLR2B-209ENST00000484821 PRM1P04553 51 aa0.28□□□□□ -2.36
POLR2B-209ENST00000484821 C18orf32Q8TCD1 76 aa0.28□□□□□ -2.36
POLR2B-209ENST00000484821 DCHS1Q96JQ0 3298 aa0.28□□□□□ -2.37
POLR2B-209ENST00000484821 URB2Q14146 1524 aaKnown RBP0.28□□□□□ -2.37
POLR2B-209ENST00000484821 PKDREJQ9NTG1 2253 aa0.27□□□□□ -2.37
POLR2B-209ENST00000484821 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
POLR2B-209ENST00000484821 TLN1Q9Y490 2541 aaKnown RBP0.27□□□□□ -2.37
POLR2B-209ENST00000484821 ITPR2Q14571 2701 aa0.27□□□□□ -2.37
POLR2B-209ENST00000484821 TIAM2Q8IVF5 1701 aa0.27□□□□□ -2.37
POLR2B-209ENST00000484821 WDR87Q6ZQQ6 2873 aa0.26□□□□□ -2.37
POLR2B-209ENST00000484821 SMIM13P0DJ93 91 aa0.26□□□□□ -2.37
POLR2B-209ENST00000484821 MAP3K1Q13233 1512 aa0.26□□□□□ -2.37
POLR2B-209ENST00000484821 IQGAP3Q86VI3 1631 aa0.26□□□□□ -2.37
POLR2B-209ENST00000484821 AKAP6Q13023 2319 aa0.26□□□□□ -2.37
POLR2B-209ENST00000484821 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
POLR2B-209ENST00000484821 MYO5CQ9NQX4 1742 aa0.25□□□□□ -2.37
POLR2B-209ENST00000484821 MAGI3Q5TCQ9 1506 aa0.25□□□□□ -2.37
POLR2B-209ENST00000484821 LAMA1P25391 3075 aa0.24□□□□□ -2.37
POLR2B-209ENST00000484821 ABCC1P33527 1531 aa0.24□□□□□ -2.37
POLR2B-209ENST00000484821 C5orf42Q9H799 3197 aa0.24□□□□□ -2.37
POLR2B-209ENST00000484821 HMGA1P17096 107 aaKnown RBP0.24□□□□□ -2.37
POLR2B-209ENST00000484821 FAT2Q9NYQ8 4349 aa0.24□□□□□ -2.37
POLR2B-209ENST00000484821 RICTORQ6R327 1708 aa0.24□□□□□ -2.37
POLR2B-209ENST00000484821 PLCH1Q4KWH8 1693 aa0.24□□□□□ -2.37
POLR2B-209ENST00000484821 TNRC6CQ9HCJ0 1690 aaKnown RBP0.24□□□□□ -2.37
POLR2B-209ENST00000484821 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.24□□□□□ -2.372e-11■■■■□ 23.4
POLR2B-209ENST00000484821 MUC3AQ02505 3323 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 CLIP1P30622 1438 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 HEPN1Q6WQI6 88 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 C4AP0C0L4 1744 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 C4BP0C0L5 1744 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 CFAP43Q8NDM7 1665 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 PTPN23Q9H3S7 1636 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 NWD1Q149M9 1564 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 TNXBP22105 4242 aa0.23□□□□□ -2.37
POLR2B-209ENST00000484821 PCNX1Q96RV3 2341 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 CD163L1Q9NR16 1453 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 LRBAP50851 2863 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 HRNRQ86YZ3 2850 aaPredicted RBP0.22□□□□□ -2.37
POLR2B-209ENST00000484821 A0A087WXM4 84 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 UMAD1C9J7I0 102 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 SPINK4O60575 86 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 NDUFB1O75438 58 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 NDUFA3O95167 84 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 NREPQ16612 68 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 NESP48681 1621 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 WNK2Q9Y3S1 2297 aa0.22□□□□□ -2.37
POLR2B-209ENST00000484821 ANKARQ7Z5J8 1434 aa0.21□□□□□ -2.38
POLR2B-209ENST00000484821 LCE6AA0A183 80 aa0.21□□□□□ -2.38
POLR2B-209ENST00000484821 IFI27P40305 119 aaPredicted RBP0.21□□□□□ -2.38
POLR2B-209ENST00000484821 ATP5EP2Q5VTU8 51 aa0.21□□□□□ -2.38
POLR2B-209ENST00000484821 CRYBG3Q68DQ2 2970 aa0.21□□□□□ -2.38
POLR2B-209ENST00000484821 WFDC13Q8IUB5 93 aa0.21□□□□□ -2.38
POLR2B-209ENST00000484821 CCL22O00626 93 aa0.2□□□□□ -2.38
POLR2B-209ENST00000484821 CSPG4Q6UVK1 2322 aa0.2□□□□□ -2.38
POLR2B-209ENST00000484821 PARP4Q9UKK3 1724 aaKnown RBP0.19□□□□□ -2.38
POLR2B-209ENST00000484821 BRCA2P51587 3418 aa0.19□□□□□ -2.38
POLR2B-209ENST00000484821 NF1P21359 2839 aa0.19□□□□□ -2.38
POLR2B-209ENST00000484821 NIPBLQ6KC79 2804 aaeCLIP0.19□□□□□ -2.38
POLR2B-209ENST00000484821 UGGT2Q9NYU1 1516 aa0.18□□□□□ -2.38
POLR2B-209ENST00000484821 CCDC88BA6NC98 1476 aa0.18□□□□□ -2.38
POLR2B-209ENST00000484821 KRTAP19-6Q3LI70 58 aa0.18□□□□□ -2.38
POLR2B-209ENST00000484821 CDKN2A-AS1Q9UH64 79 aa0.18□□□□□ -2.38
POLR2B-209ENST00000484821 CEP250Q9BV73 2442 aa0.17□□□□□ -2.38
POLR2B-209ENST00000484821 FAM186AA6NE01 2351 aa0.17□□□□□ -2.38
POLR2B-209ENST00000484821 LOC730098B7Z3J9 87 aa0.17□□□□□ -2.38
POLR2B-209ENST00000484821 APC2O95996 2303 aa0.17□□□□□ -2.38
POLR2B-209ENST00000484821 RPL38P63173 70 aaKnown RBP0.17□□□□□ -2.38
POLR2B-209ENST00000484821 TJP1Q07157 1748 aa0.17□□□□□ -2.38
POLR2B-209ENST00000484821 ITSN1Q15811 1721 aa0.17□□□□□ -2.38
POLR2B-209ENST00000484821 DDX60LQ5H9U9 1706 aaKnown RBP0.16□□□□□ -2.38
POLR2B-209ENST00000484821 NDUFA4O00483 81 aa0.16□□□□□ -2.38
POLR2B-209ENST00000484821 SPTAN1Q13813 2472 aaKnown RBP0.16□□□□□ -2.38
POLR2B-209ENST00000484821 MAP1AP78559 2803 aaPredicted RBP0.16□□□□□ -2.38
POLR2B-209ENST00000484821 ASPMQ8IZT6 3477 aa0.16□□□□□ -2.38
POLR2B-209ENST00000484821 SPTA1P02549 2419 aa0.16□□□□□ -2.38
POLR2B-209ENST00000484821 HUWE1Q7Z6Z7 4374 aaKnown RBP0.16□□□□□ -2.38
POLR2B-209ENST00000484821 MYCBP2O75592 4640 aa0.15□□□□□ -2.38
POLR2B-209ENST00000484821 PDE4DIPQ5VU43 2346 aa0.15□□□□□ -2.38
POLR2B-209ENST00000484821 WIZO95785 1651 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 MTORP42345 2549 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 CENPFP49454 3210 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 MT4P47944 62 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 LAMA5O15230 3695 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 ADAMTS12P58397 1594 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 DIP2AQ14689 1571 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 DNMBPQ6XZF7 1577 aa0.15□□□□□ -2.39
POLR2B-209ENST00000484821 DMXL2Q8TDJ6 3036 aa0.14□□□□□ -2.39
POLR2B-209ENST00000484821 EIF2AK4Q9P2K8 1649 aaKnown RBP0.14□□□□□ -2.39
POLR2B-209ENST00000484821 NRAPQ86VF7 1730 aa0.14□□□□□ -2.39
POLR2B-209ENST00000484821 H3BVH4 76 aa0.14□□□□□ -2.39
POLR2B-209ENST00000484821 SMCO4Q9NRQ5 59 aa0.14□□□□□ -2.39
POLR2B-209ENST00000484821 SPTBN5Q9NRC6 3674 aaKnown RBP0.14□□□□□ -2.39
POLR2B-209ENST00000484821 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
POLR2B-209ENST00000484821 H0YGG7 62 aa0.13□□□□□ -2.39
POLR2B-209ENST00000484821 SPRR2DP22532 72 aa0.13□□□□□ -2.39
POLR2B-209ENST00000484821 DEFA5Q01523 94 aa0.13□□□□□ -2.39
POLR2B-209ENST00000484821 HILPDAQ9Y5L2 63 aa0.13□□□□□ -2.39
POLR2B-209ENST00000484821 CDC42BPGQ6DT37 1551 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms