RNA–Protein interactions for RNA: ENST00000484821.1

POLR2B-209, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-209ENST00000484821 AEBP2Q6ZN18 517 aaPredicted RBP35.09■■■■□ 3.21
POLR2B-209ENST00000484821 CHIC1Q5VXU3 224 aa33.36■■■□□ 2.93
POLR2B-209ENST00000484821 SENP3Q9H4L4 574 aaPredicted RBP29.88■■■□□ 2.37
POLR2B-209ENST00000484821 PHF23Q9BUL5 403 aaPredicted RBP29.53■■■□□ 2.32
POLR2B-209ENST00000484821 FOXD1Q16676 465 aa27.87■■■□□ 2.05
POLR2B-209ENST00000484821 PLPPR3Q6T4P5 718 aa26.67■■□□□ 1.86
POLR2B-209ENST00000484821 PPP6R1Q9UPN7 881 aa26.13■■□□□ 1.77
POLR2B-209ENST00000484821 MSH5O43196 834 aa26.03■■□□□ 1.76
POLR2B-209ENST00000484821 ADRA2BP18089 450 aa26.03■■□□□ 1.76
POLR2B-209ENST00000484821 PIAS4Q8N2W9 510 aaPredicted RBP26.03■■□□□ 1.76
POLR2B-209ENST00000484821 POTEDQ86YR6 584 aa25.33■■□□□ 1.65
POLR2B-209ENST00000484821 MAPK8IP2Q13387 824 aaPredicted RBP23.91■■□□□ 1.42
POLR2B-209ENST00000484821 SCAF1Q9H7N4 1312 aaKnown RBP23.79■■□□□ 1.4
POLR2B-209ENST00000484821 DMRT2Q9Y5R5 561 aa23.72■■□□□ 1.39
POLR2B-209ENST00000484821 PPP4R3CPQ6ZMV5 832 aa23.39■■□□□ 1.33
POLR2B-209ENST00000484821 CNKSR2Q8WXI2 1034 aa22.93■■□□□ 1.26
POLR2B-209ENST00000484821 HOXD11P31277 338 aaPredicted RBP22.88■■□□□ 1.25
POLR2B-209ENST00000484821 RNF216Q9NWF9 866 aaPredicted RBP22.72■■□□□ 1.23
POLR2B-209ENST00000484821 DCAF8L1A6NGE4 600 aa22.71■■□□□ 1.23
POLR2B-209ENST00000484821 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
POLR2B-209ENST00000484821 CACNB1Q02641 598 aaPredicted RBP22.3■■□□□ 1.16
POLR2B-209ENST00000484821 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
POLR2B-209ENST00000484821 NPM3O75607 178 aaKnown RBP22.19■■□□□ 1.14
POLR2B-209ENST00000484821 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
POLR2B-209ENST00000484821 C1QBPQ07021 282 aaKnown RBP21.91■■□□□ 1.1
POLR2B-209ENST00000484821 KCNA4P22459 653 aa21.82■■□□□ 1.08
POLR2B-209ENST00000484821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.77■■□□□ 1.08
POLR2B-209ENST00000484821 U3KPZ7 1027 aaPredicted RBP21.34■■□□□ 1.01
POLR2B-209ENST00000484821 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
POLR2B-209ENST00000484821 SPINK5Q9NQ38 1064 aaPredicted RBP21.02■□□□□ 0.96
POLR2B-209ENST00000484821 CAPN15O75808 1086 aa20.95■□□□□ 0.94
POLR2B-209ENST00000484821 DSG3P32926 999 aa20.85■□□□□ 0.93
POLR2B-209ENST00000484821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.72■□□□□ 0.91
POLR2B-209ENST00000484821 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
POLR2B-209ENST00000484821 APLP2Q06481 763 aa20.7■□□□□ 0.9
POLR2B-209ENST00000484821 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
POLR2B-209ENST00000484821 SAMD1Q6SPF0 538 aaPredicted RBP20.61■□□□□ 0.89
POLR2B-209ENST00000484821 SLC4A1APQ9BWU0 796 aaKnown RBP20.59■□□□□ 0.89
POLR2B-209ENST00000484821 ZNF219Q9P2Y4 722 aaPredicted RBP20.59■□□□□ 0.89
POLR2B-209ENST00000484821 MYCNP04198 464 aaPredicted RBP20.5■□□□□ 0.87
POLR2B-209ENST00000484821 ABCB7O75027 752 aa20.48■□□□□ 0.87
POLR2B-209ENST00000484821 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
POLR2B-209ENST00000484821 POLA2Q14181 598 aa20.12■□□□□ 0.81
POLR2B-209ENST00000484821 ZBTB22O15209 634 aa20.08■□□□□ 0.81
POLR2B-209ENST00000484821 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
POLR2B-209ENST00000484821 POTEHQ6S545 545 aa19.85■□□□□ 0.77
POLR2B-209ENST00000484821 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
POLR2B-209ENST00000484821 ATXN8OSP0DMR3 200 aa19.7■□□□□ 0.74
POLR2B-209ENST00000484821 ZBTB12Q9Y330 459 aaPredicted RBP19.67■□□□□ 0.74
POLR2B-209ENST00000484821 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
POLR2B-209ENST00000484821 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
POLR2B-209ENST00000484821 CHRDL2Q6WN34 429 aa19.41■□□□□ 0.7
POLR2B-209ENST00000484821 REM2Q8IYK8 340 aaPredicted RBP19.26■□□□□ 0.67
POLR2B-209ENST00000484821 FBLN2P98095 1184 aa19.22■□□□□ 0.67
POLR2B-209ENST00000484821 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
POLR2B-209ENST00000484821 MKRN4PQ13434 485 aaPredicted RBP19.14■□□□□ 0.65
POLR2B-209ENST00000484821 SPDYE2BA6NHP3 402 aa19.09■□□□□ 0.65
POLR2B-209ENST00000484821 SPDYE6P0CI01 402 aa19.09■□□□□ 0.65
POLR2B-209ENST00000484821 SPDYE2Q495Y8 402 aa19.09■□□□□ 0.65
POLR2B-209ENST00000484821 PITPNM1O00562 1244 aa19.05■□□□□ 0.64
POLR2B-209ENST00000484821 PIP4P2Q8N4L2 257 aa18.98■□□□□ 0.63
POLR2B-209ENST00000484821 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
POLR2B-209ENST00000484821 FXR2P51116 673 aaKnown RBP eCLIP18.89■□□□□ 0.61
POLR2B-209ENST00000484821 ZNF692Q9BU19 519 aaPredicted RBP18.88■□□□□ 0.61
POLR2B-209ENST00000484821 SSUH2Q9Y2M2 353 aa18.86■□□□□ 0.61
POLR2B-209ENST00000484821 SPDYE1Q8NFV5 336 aaPredicted RBP18.74■□□□□ 0.59
POLR2B-209ENST00000484821 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
POLR2B-209ENST00000484821 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
POLR2B-209ENST00000484821 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
POLR2B-209ENST00000484821 HAX1O00165 279 aa18.6■□□□□ 0.57
POLR2B-209ENST00000484821 PRKAR2AP13861 404 aaKnown RBP18.55■□□□□ 0.56
POLR2B-209ENST00000484821 PRR29P0C7W0 189 aa18.42■□□□□ 0.54
POLR2B-209ENST00000484821 EVX2Q03828 476 aa18.42■□□□□ 0.54
POLR2B-209ENST00000484821 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
POLR2B-209ENST00000484821 C19orf67A6NJJ6 358 aa18.28■□□□□ 0.52
POLR2B-209ENST00000484821 SPDYE4A6NLX3 237 aa18.24■□□□□ 0.51
POLR2B-209ENST00000484821 FARP1Q9Y4F1 1045 aaPredicted RBP18.1■□□□□ 0.49
POLR2B-209ENST00000484821 STAG3Q9UJ98 1225 aa18.09■□□□□ 0.49
POLR2B-209ENST00000484821 GABBR2O75899 941 aa17.99■□□□□ 0.47
POLR2B-209ENST00000484821 CREBZFQ9NS37 354 aa17.99■□□□□ 0.47
POLR2B-209ENST00000484821 CD44P16070 742 aaKnown RBP17.96■□□□□ 0.47
POLR2B-209ENST00000484821 PROM2Q8N271 834 aa17.84■□□□□ 0.45
POLR2B-209ENST00000484821 MNX1P50219 401 aaPredicted RBP17.71■□□□□ 0.43
POLR2B-209ENST00000484821 CLCN6P51797 869 aa17.71■□□□□ 0.43
POLR2B-209ENST00000484821 ZRANB1Q9UGI0 708 aa17.71■□□□□ 0.43
POLR2B-209ENST00000484821 ZNF579Q8NAF0 562 aaKnown RBP17.69■□□□□ 0.42
POLR2B-209ENST00000484821 NPM1P06748 294 aaKnown RBP eCLIP17.63■□□□□ 0.41
POLR2B-209ENST00000484821 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
POLR2B-209ENST00000484821 PAK3O75914 559 aaPredicted RBP17.55■□□□□ 0.4
POLR2B-209ENST00000484821 DCBLD2Q96PD2 775 aa17.49■□□□□ 0.39
POLR2B-209ENST00000484821 GALR2O43603 387 aaPredicted RBP17.48■□□□□ 0.39
POLR2B-209ENST00000484821 LHX8Q68G74 356 aa17.48■□□□□ 0.39
POLR2B-209ENST00000484821 PHF12Q96QT6 1004 aa17.48■□□□□ 0.39
POLR2B-209ENST00000484821 FKBP8Q14318 412 aa17.39■□□□□ 0.37
POLR2B-209ENST00000484821 MIER1Q8N108 512 aa17.39■□□□□ 0.37
POLR2B-209ENST00000484821 PLEKHG5O94827 1062 aa17.33■□□□□ 0.36
POLR2B-209ENST00000484821 TSPYL2Q9H2G4 693 aaPredicted RBP17.33■□□□□ 0.36
POLR2B-209ENST00000484821 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
POLR2B-209ENST00000484821 MS4A3Q96HJ5 214 aa17.25■□□□□ 0.35
POLR2B-209ENST00000484821 PLCD3Q8N3E9 789 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms