RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 COL4A2P08572 1712 aa6.08□□□□□ -1.44
ALMS1-204ENST00000484298 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
ALMS1-204ENST00000484298 A0A087WTM6 91 aa6.04□□□□□ -1.44
ALMS1-204ENST00000484298 TEP1Q99973 2627 aaKnown RBP6.04□□□□□ -1.44
ALMS1-204ENST00000484298 TEX15Q9BXT5 2789 aa6.03□□□□□ -1.44
ALMS1-204ENST00000484298 IGSF10Q6WRI0 2623 aa6.03□□□□□ -1.44
ALMS1-204ENST00000484298 KLK9Q2XQG4 91 aa6.02□□□□□ -1.45
ALMS1-204ENST00000484298 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
ALMS1-204ENST00000484298 GIG44P09565 113 aaPredicted RBP5.98□□□□□ -1.45
ALMS1-204ENST00000484298 Q5W150 140 aa5.98□□□□□ -1.45
ALMS1-204ENST00000484298 LINC00612Q8N6U2 182 aa5.97□□□□□ -1.45
ALMS1-204ENST00000484298 M0QZ58 72 aa5.96□□□□□ -1.46
ALMS1-204ENST00000484298 KRTAP10-11P60412 298 aa5.96□□□□□ -1.46
ALMS1-204ENST00000484298 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
ALMS1-204ENST00000484298 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
ALMS1-204ENST00000484298 ITPR2Q14571 2701 aa5.94□□□□□ -1.46
ALMS1-204ENST00000484298 K7EIL1 84 aa5.92□□□□□ -1.46
ALMS1-204ENST00000484298 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
ALMS1-204ENST00000484298 CYSTM1Q9H1C7 97 aa5.91□□□□□ -1.46
ALMS1-204ENST00000484298 UTP20O75691 2785 aaKnown RBP5.91□□□□□ -1.46
ALMS1-204ENST00000484298 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.47
ALMS1-204ENST00000484298 LINC00472Q9H8W2 130 aa5.87□□□□□ -1.47
ALMS1-204ENST00000484298 Q8NDZ9 215 aa5.87□□□□□ -1.47
ALMS1-204ENST00000484298 A6NN06 94 aa5.86□□□□□ -1.47
ALMS1-204ENST00000484298 A0A087X002 238 aa5.86□□□□□ -1.47
ALMS1-204ENST00000484298 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
ALMS1-204ENST00000484298 KMT2BQ9UMN6 2715 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-204ENST00000484298 PANO1I0J062 215 aa5.85□□□□□ -1.47
ALMS1-204ENST00000484298 Q6ZR54 194 aa5.84□□□□□ -1.47
ALMS1-204ENST00000484298 SETXQ7Z333 2677 aaKnown RBP5.84□□□□□ -1.47
ALMS1-204ENST00000484298 APCP25054 2843 aa5.83□□□□□ -1.48
ALMS1-204ENST00000484298 MAP1AP78559 2803 aaPredicted RBP5.82□□□□□ -1.48
ALMS1-204ENST00000484298 A0A096LNT2 108 aa5.82□□□□□ -1.48
ALMS1-204ENST00000484298 OXTP01178 125 aa5.82□□□□□ -1.48
ALMS1-204ENST00000484298 C10orf142B7Z368 130 aa5.8□□□□□ -1.48
ALMS1-204ENST00000484298 ADM2Q7Z4H4 148 aa5.8□□□□□ -1.48
ALMS1-204ENST00000484298 Q5VSD8 79 aa5.79□□□□□ -1.48
ALMS1-204ENST00000484298 SPRR1BP22528 89 aa5.77□□□□□ -1.49
ALMS1-204ENST00000484298 SPRR1AP35321 89 aa5.77□□□□□ -1.49
ALMS1-204ENST00000484298 PLAC8Q9NZF1 115 aa5.75□□□□□ -1.49
ALMS1-204ENST00000484298 ZNF292O60281 2723 aa5.75□□□□□ -1.49
ALMS1-204ENST00000484298 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
ALMS1-204ENST00000484298 ITPR1Q14643 2758 aa5.71□□□□□ -1.5
ALMS1-204ENST00000484298 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
ALMS1-204ENST00000484298 UBR5O95071 2799 aaPredicted RBP5.7□□□□□ -1.5
ALMS1-204ENST00000484298 KRTAP26-1Q6PEX3 210 aa5.7□□□□□ -1.5
ALMS1-204ENST00000484298 KRTAP10-3P60369 221 aa5.7□□□□□ -1.5
ALMS1-204ENST00000484298 NBEAL2Q6ZNJ1 2754 aa5.67□□□□□ -1.5
ALMS1-204ENST00000484298 TNP1P09430 55 aa5.64□□□□□ -1.51
ALMS1-204ENST00000484298 A8MUU9 505 aa5.64□□□□□ -1.51
ALMS1-204ENST00000484298 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
ALMS1-204ENST00000484298 CEP350Q5VT06 3117 aa5.6□□□□□ -1.51
ALMS1-204ENST00000484298 KRTAP11-1Q8IUC1 163 aa5.58□□□□□ -1.52
ALMS1-204ENST00000484298 A8MU10 97 aa5.56□□□□□ -1.52
ALMS1-204ENST00000484298 TENM3Q9P273 2699 aa5.54□□□□□ -1.52
ALMS1-204ENST00000484298 LRBAP50851 2863 aa5.54□□□□□ -1.52
ALMS1-204ENST00000484298 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
ALMS1-204ENST00000484298 LCE6AA0A183 80 aa5.54□□□□□ -1.52
ALMS1-204ENST00000484298 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-204ENST00000484298 PCNTO95613 3336 aa5.48□□□□□ -1.53
ALMS1-204ENST00000484298 TRANK1O15050 2925 aa5.47□□□□□ -1.53
ALMS1-204ENST00000484298 SRCAPQ6ZRS2 3230 aa5.47□□□□□ -1.53
ALMS1-204ENST00000484298 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
ALMS1-204ENST00000484298 P0C880 135 aa5.44□□□□□ -1.54
ALMS1-204ENST00000484298 KALRNO60229 2985 aa5.43□□□□□ -1.54
ALMS1-204ENST00000484298 CHD9Q3L8U1 2897 aa5.42□□□□□ -1.54
ALMS1-204ENST00000484298 KRTAP10-1P60331 282 aa5.41□□□□□ -1.54
ALMS1-204ENST00000484298 DSPP15924 2871 aaKnown RBP5.4□□□□□ -1.55
ALMS1-204ENST00000484298 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
ALMS1-204ENST00000484298 FLNCQ14315 2725 aa5.37□□□□□ -1.55
ALMS1-204ENST00000484298 NF1P21359 2839 aa5.37□□□□□ -1.55
ALMS1-204ENST00000484298 DNAH12Q6ZR08 3092 aa5.37□□□□□ -1.55
ALMS1-204ENST00000484298 A0A0C4DFX4 3053 aa5.36□□□□□ -1.55
ALMS1-204ENST00000484298 CFAP54Q96N23 3096 aa5.35□□□□□ -1.55
ALMS1-204ENST00000484298 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
ALMS1-204ENST00000484298 TENM1Q9UKZ4 2725 aa5.34□□□□□ -1.55
ALMS1-204ENST00000484298 KRTAP1-3Q8IUG1 177 aa5.34□□□□□ -1.55
ALMS1-204ENST00000484298 TGP01266 2768 aa5.34□□□□□ -1.55
ALMS1-204ENST00000484298 KRTAP1-5Q9BYS1 174 aa5.33□□□□□ -1.56
ALMS1-204ENST00000484298 HIVEP1P15822 2718 aa5.31□□□□□ -1.56
ALMS1-204ENST00000484298 LAMA2P24043 3122 aaKnown RBP5.27□□□□□ -1.57
ALMS1-204ENST00000484298 Q6ZRN7 208 aaPredicted RBP5.27□□□□□ -1.57
ALMS1-204ENST00000484298 ASH1LQ9NR48 2969 aaKnown RBP5.27□□□□□ -1.57
ALMS1-204ENST00000484298 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
ALMS1-204ENST00000484298 SRRM2Q9UQ35 2752 aaKnown RBP5.26□□□□□ -1.57
ALMS1-204ENST00000484298 EP400Q96L91 3159 aa5.25□□□□□ -1.57
ALMS1-204ENST00000484298 FRYLO94915 3013 aa5.25□□□□□ -1.57
ALMS1-204ENST00000484298 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
ALMS1-204ENST00000484298 C5orf42Q9H799 3197 aa5.24□□□□□ -1.57
ALMS1-204ENST00000484298 NIPBLQ6KC79 2804 aaeCLIP5.23□□□□□ -1.57
ALMS1-204ENST00000484298 H0YAA0 97 aa5.23□□□□□ -1.57
ALMS1-204ENST00000484298 PDZD2O15018 2839 aa5.22□□□□□ -1.57
ALMS1-204ENST00000484298 CELSR2Q9HCU4 2923 aa5.2□□□□□ -1.58
ALMS1-204ENST00000484298 TRIOO75962 3097 aa5.2□□□□□ -1.58
ALMS1-204ENST00000484298 CHD7Q9P2D1 2997 aa5.19□□□□□ -1.58
ALMS1-204ENST00000484298 FRYQ5TBA9 3013 aa5.17□□□□□ -1.58
ALMS1-204ENST00000484298 A0A1B0GVY2 172 aa5.16□□□□□ -1.58
ALMS1-204ENST00000484298 MGAQ8IWI9 3026 aa5.13□□□□□ -1.59
ALMS1-204ENST00000484298 KRTAP13-1Q8IUC0 172 aa5.1□□□□□ -1.59
ALMS1-204ENST00000484298 KRTAP13-2Q52LG2 175 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms