RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 C2CD3Q4AC94 2353 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 C3orf84H3BNL1 204 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 PRB1P04280 392 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 SPRR1BP22528 89 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 CD164Q04900 197 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 Q9BRP9 147 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 HIGD2AQ9BW72 106 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 LINC00474Q9P2X8 69 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 CHD8Q9HCK8 2581 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 CHD6Q8TD26 2715 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 CSMD1Q96PZ7 3565 aa2.99□□□□□ -1.93
SSBP1-211ENST00000484178 PIEZO1Q92508 2521 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 MAP1AP78559 2803 aaPredicted RBP2.98□□□□□ -1.93
SSBP1-211ENST00000484178 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 CNBPP62633 177 aaKnown RBP2.98□□□□□ -1.93
SSBP1-211ENST00000484178 DEFB105AQ8NG35 78 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 TLN2Q9Y4G6 2542 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 PTPN13Q12923 2485 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 IGSF10Q6WRI0 2623 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 CELSR2Q9HCU4 2923 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 FLNCQ14315 2725 aa2.98□□□□□ -1.93
SSBP1-211ENST00000484178 WNK1Q9H4A3 2382 aa2.97□□□□□ -1.93
SSBP1-211ENST00000484178 FBN2P35556 2912 aa2.97□□□□□ -1.93
SSBP1-211ENST00000484178 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.97□□□□□ -1.93
SSBP1-211ENST00000484178 C16orf90A8MZG2 172 aa2.97□□□□□ -1.93
SSBP1-211ENST00000484178 PSCAO43653 123 aa2.97□□□□□ -1.93
SSBP1-211ENST00000484178 C1orf64Q8NEQ6 169 aa2.97□□□□□ -1.93
SSBP1-211ENST00000484178 B9D2Q9BPU9 175 aa2.97□□□□□ -1.93
SSBP1-211ENST00000484178 SPTBN4Q9H254 2564 aa2.97□□□□□ -1.93
SSBP1-211ENST00000484178 RELNP78509 3460 aa2.96□□□□□ -1.93
SSBP1-211ENST00000484178 LRRK2Q5S007 2527 aa2.96□□□□□ -1.93
SSBP1-211ENST00000484178 UTP20O75691 2785 aaKnown RBP2.96□□□□□ -1.94
SSBP1-211ENST00000484178 TEX15Q9BXT5 2789 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 FAM208BQ5VWN6 2430 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 TRAV22A0A0B4J277 110 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 A8MWP4 228 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 UBE2AP49459 152 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 Q8N9L7 120 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 TYMSOSQ8TAI1 123 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 ZNF462Q96JM2 2506 aa2.96□□□□□ -1.94
SSBP1-211ENST00000484178 CRYBG3Q68DQ2 2970 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 EPG5Q9HCE0 2579 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 SETXQ7Z333 2677 aaKnown RBP2.95□□□□□ -1.94
SSBP1-211ENST00000484178 K7EQZ3 153 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 IGFL1Q6UW32 110 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 CASC2Q6XLA1 102 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 LINC00208Q96KT6 92 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 ZANQ9Y493 2812 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 ITPR3Q14573 2671 aa2.95□□□□□ -1.94
SSBP1-211ENST00000484178 MOBPQ13875 183 aa2.94□□□□□ -1.94
SSBP1-211ENST00000484178 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
SSBP1-211ENST00000484178 ZNF706Q9Y5V0 76 aaPredicted RBP2.94□□□□□ -1.94
SSBP1-211ENST00000484178 HIVEP2P31629 2446 aa2.93□□□□□ -1.94
SSBP1-211ENST00000484178 APCP25054 2843 aa2.93□□□□□ -1.94
SSBP1-211ENST00000484178 H0Y9P7 68 aa2.93□□□□□ -1.94
SSBP1-211ENST00000484178 PMAIP1Q13794 54 aa2.93□□□□□ -1.94
SSBP1-211ENST00000484178 POLQO75417 2590 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 SVEP1Q4LDE5 3571 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 A0A087WSZ3 146 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 LOC101927531A0A1B0GV80 90 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 FAM168BA1KXE4 195 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 PSPHP1O15172 72 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 ATP11AUNQ6ZP68 121 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
SSBP1-211ENST00000484178 ST20-AS1Q8NBB2 130 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 LINC00472Q9H8W2 130 aa2.92□□□□□ -1.94
SSBP1-211ENST00000484178 JMJD1CQ15652 2540 aa2.91□□□□□ -1.94
SSBP1-211ENST00000484178 NDUFS5O43920 106 aa2.91□□□□□ -1.94
SSBP1-211ENST00000484178 C9orf163Q8N9P6 203 aa2.91□□□□□ -1.94
SSBP1-211ENST00000484178 ABCA12Q86UK0 2595 aa2.91□□□□□ -1.94
SSBP1-211ENST00000484178 FLNAP21333 2647 aaKnown RBP2.9□□□□□ -1.94
SSBP1-211ENST00000484178 CENPEQ02224 2701 aa2.9□□□□□ -1.95
SSBP1-211ENST00000484178 ASB16-AS1Q495Z4 193 aa2.9□□□□□ -1.95
SSBP1-211ENST00000484178 Q6ZR54 194 aa2.9□□□□□ -1.95
SSBP1-211ENST00000484178 LINC00483Q53H64 154 aa2.89□□□□□ -1.95
SSBP1-211ENST00000484178 WFDC13Q8IUB5 93 aa2.89□□□□□ -1.95
SSBP1-211ENST00000484178 USP24Q9UPU5 2620 aa2.89□□□□□ -1.95
SSBP1-211ENST00000484178 IGHV6-1A0A0B4J1U7 121 aa2.88□□□□□ -1.95
SSBP1-211ENST00000484178 A8MU10 97 aa2.88□□□□□ -1.95
SSBP1-211ENST00000484178 SMR3AQ99954 134 aa2.88□□□□□ -1.95
SSBP1-211ENST00000484178 LINC01558Q9Y6Z2 57 aa2.88□□□□□ -1.95
SSBP1-211ENST00000484178 SONP18583 2426 aaKnown RBP2.88□□□□□ -1.95
SSBP1-211ENST00000484178 VPS13CQ709C8 3753 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 A0A096LNI7 61 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 MMP24-AS1A0A0U1RRL7 71 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 Q5VV11 94 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 PHF5AQ7RTV0 110 aaKnown RBP2.87□□□□□ -1.95
SSBP1-211ENST00000484178 CDC42SE1Q9NRR8 79 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 PDZD2O15018 2839 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
SSBP1-211ENST00000484178 GCN1Q92616 2671 aaKnown RBP2.86□□□□□ -1.95
SSBP1-211ENST00000484178 CCDC168Q8NDH2 2452 aa2.86□□□□□ -1.95
SSBP1-211ENST00000484178 ZFYVE26Q68DK2 2539 aa2.86□□□□□ -1.95
SSBP1-211ENST00000484178 ANK3Q12955 4377 aaKnown RBP2.86□□□□□ -1.95
SSBP1-211ENST00000484178 NF1P21359 2839 aa2.86□□□□□ -1.95
SSBP1-211ENST00000484178 FN1P02751 2386 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms