RNA–Protein interactions for RNA: ENST00000483289.2

AC008040.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC008040.1, Length 6,251 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008040.1-202ENST00000483289 CHD7Q9P2D1 2997 aa4.06□□□□□ -1.76
AC008040.1-202ENST00000483289 TLN2Q9Y4G6 2542 aa4.06□□□□□ -1.76
AC008040.1-202ENST00000483289 LCE6AA0A183 80 aa4.05□□□□□ -1.76
AC008040.1-202ENST00000483289 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
AC008040.1-202ENST00000483289 DNAH14Q0VDD8 3507 aa4.04□□□□□ -1.76
AC008040.1-202ENST00000483289 PANO1I0J062 215 aa4.04□□□□□ -1.76
AC008040.1-202ENST00000483289 FLNBO75369 2602 aaKnown RBP4.03□□□□□ -1.76
AC008040.1-202ENST00000483289 ANKRD11Q6UB99 2663 aaPredicted RBP4.02□□□□□ -1.77
AC008040.1-202ENST00000483289 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
AC008040.1-202ENST00000483289 POLQO75417 2590 aa4.01□□□□□ -1.77
AC008040.1-202ENST00000483289 SETD2Q9BYW2 2564 aaPredicted RBP4.01□□□□□ -1.77
AC008040.1-202ENST00000483289 BRCA2P51587 3418 aa4□□□□□ -1.77
AC008040.1-202ENST00000483289 CFAP54Q96N23 3096 aa4□□□□□ -1.77
AC008040.1-202ENST00000483289 KRTAP16-1A8MUX0 517 aa4□□□□□ -1.77
AC008040.1-202ENST00000483289 R4GN34 69 aa3.99□□□□□ -1.77
AC008040.1-202ENST00000483289 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
AC008040.1-202ENST00000483289 DOPEY1Q5JWR5 2465 aa3.98□□□□□ -1.77
AC008040.1-202ENST00000483289 HTTP42858 3142 aa3.98□□□□□ -1.77
AC008040.1-202ENST00000483289 EPG5Q9HCE0 2579 aa3.98□□□□□ -1.77
AC008040.1-202ENST00000483289 JMJD1CQ15652 2540 aa3.98□□□□□ -1.77
AC008040.1-202ENST00000483289 USP9YO00507 2555 aaPredicted RBP3.97□□□□□ -1.77
AC008040.1-202ENST00000483289 M0QZ58 72 aa3.97□□□□□ -1.77
AC008040.1-202ENST00000483289 KRTAP10-2P60368 255 aa3.96□□□□□ -1.77
AC008040.1-202ENST00000483289 PRRC2CQ9Y520 2896 aaKnown RBP3.96□□□□□ -1.78
AC008040.1-202ENST00000483289 KRTAP10-1P60331 282 aa3.96□□□□□ -1.78
AC008040.1-202ENST00000483289 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
AC008040.1-202ENST00000483289 CEP295Q9C0D2 2601 aa3.95□□□□□ -1.78
AC008040.1-202ENST00000483289 F8P00451 2351 aa3.94□□□□□ -1.78
AC008040.1-202ENST00000483289 ACANP16112 2415 aa3.93□□□□□ -1.78
AC008040.1-202ENST00000483289 TRIOO75962 3097 aa3.93□□□□□ -1.78
AC008040.1-202ENST00000483289 XIRP2A4UGR9 3374 aa3.93□□□□□ -1.78
AC008040.1-202ENST00000483289 CHD9Q3L8U1 2897 aa3.93□□□□□ -1.78
AC008040.1-202ENST00000483289 MTORP42345 2549 aa3.92□□□□□ -1.78
AC008040.1-202ENST00000483289 CELSR3Q9NYQ7 3312 aa3.91□□□□□ -1.78
AC008040.1-202ENST00000483289 ZFYVE26Q68DK2 2539 aa3.91□□□□□ -1.78
AC008040.1-202ENST00000483289 M0R2T5 61 aa3.91□□□□□ -1.78
AC008040.1-202ENST00000483289 LAMA2P24043 3122 aaKnown RBP3.91□□□□□ -1.78
AC008040.1-202ENST00000483289 CDH23Q9H251 3354 aa3.9□□□□□ -1.78
AC008040.1-202ENST00000483289 SPTBN4Q9H254 2564 aa3.9□□□□□ -1.79
AC008040.1-202ENST00000483289 A8MUU9 505 aa3.89□□□□□ -1.79
AC008040.1-202ENST00000483289 SZT2Q5T011 3432 aa3.89□□□□□ -1.79
AC008040.1-202ENST00000483289 UNC80Q8N2C7 3258 aa3.88□□□□□ -1.79
AC008040.1-202ENST00000483289 RANBP2P49792 3224 aaKnown RBP3.88□□□□□ -1.79
AC008040.1-202ENST00000483289 Q5VSD8 79 aa3.86□□□□□ -1.79
AC008040.1-202ENST00000483289 LAMA3Q16787 3333 aa3.86□□□□□ -1.79
AC008040.1-202ENST00000483289 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
AC008040.1-202ENST00000483289 BAHCC1Q9P281 2608 aa3.85□□□□□ -1.79
AC008040.1-202ENST00000483289 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
AC008040.1-202ENST00000483289 KRTAP13-2Q52LG2 175 aa3.84□□□□□ -1.79
AC008040.1-202ENST00000483289 C20orf166-AS1Q96NR2 134 aa3.83□□□□□ -1.8
AC008040.1-202ENST00000483289 FREM2Q5SZK8 3169 aa3.82□□□□□ -1.8
AC008040.1-202ENST00000483289 Q6ZRN7 208 aaPredicted RBP3.82□□□□□ -1.8
AC008040.1-202ENST00000483289 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
AC008040.1-202ENST00000483289 TRANK1O15050 2925 aa3.81□□□□□ -1.8
AC008040.1-202ENST00000483289 COL6A3P12111 3177 aa3.81□□□□□ -1.8
AC008040.1-202ENST00000483289 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
AC008040.1-202ENST00000483289 VCANP13611 3396 aa3.8□□□□□ -1.8
AC008040.1-202ENST00000483289 VPS13AQ96RL7 3174 aa3.8□□□□□ -1.8
AC008040.1-202ENST00000483289 SPTBN5Q9NRC6 3674 aaKnown RBP3.78□□□□□ -1.8
AC008040.1-202ENST00000483289 MGAQ8IWI9 3026 aa3.78□□□□□ -1.8
AC008040.1-202ENST00000483289 SETXQ7Z333 2677 aaKnown RBP3.78□□□□□ -1.8
AC008040.1-202ENST00000483289 UNC79Q9P2D8 2635 aa3.78□□□□□ -1.8
AC008040.1-202ENST00000483289 H0YAA0 97 aa3.77□□□□□ -1.81
AC008040.1-202ENST00000483289 FLNAP21333 2647 aaKnown RBP3.77□□□□□ -1.81
AC008040.1-202ENST00000483289 FRYQ5TBA9 3013 aa3.77□□□□□ -1.81
AC008040.1-202ENST00000483289 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
AC008040.1-202ENST00000483289 REV3LO60673 3130 aa3.76□□□□□ -1.81
AC008040.1-202ENST00000483289 LAMA1P25391 3075 aa3.75□□□□□ -1.81
AC008040.1-202ENST00000483289 USP34Q70CQ2 3546 aa3.75□□□□□ -1.81
AC008040.1-202ENST00000483289 PRUNE2Q8WUY3 3088 aa3.74□□□□□ -1.81
AC008040.1-202ENST00000483289 ITPR3Q14573 2671 aa3.73□□□□□ -1.81
AC008040.1-202ENST00000483289 KALRNO60229 2985 aa3.73□□□□□ -1.81
AC008040.1-202ENST00000483289 WDFY4Q6ZS81 3184 aa3.73□□□□□ -1.81
AC008040.1-202ENST00000483289 AKAP13Q12802 2813 aa3.71□□□□□ -1.82
AC008040.1-202ENST00000483289 CHD6Q8TD26 2715 aa3.7□□□□□ -1.82
AC008040.1-202ENST00000483289 ZZEF1O43149 2961 aa3.69□□□□□ -1.82
AC008040.1-202ENST00000483289 SPEGQ15772 3267 aa3.69□□□□□ -1.82
AC008040.1-202ENST00000483289 LRBAP50851 2863 aa3.68□□□□□ -1.82
AC008040.1-202ENST00000483289 GCN1Q92616 2671 aaKnown RBP3.68□□□□□ -1.82
AC008040.1-202ENST00000483289 DSPP15924 2871 aaKnown RBP3.67□□□□□ -1.82
AC008040.1-202ENST00000483289 USP24Q9UPU5 2620 aa3.67□□□□□ -1.82
AC008040.1-202ENST00000483289 MYO15AQ9UKN7 3530 aa3.67□□□□□ -1.82
AC008040.1-202ENST00000483289 FRYLO94915 3013 aa3.66□□□□□ -1.82
AC008040.1-202ENST00000483289 NBEAL2Q6ZNJ1 2754 aa3.66□□□□□ -1.82
AC008040.1-202ENST00000483289 HECTD1Q9ULT8 2610 aa3.66□□□□□ -1.82
AC008040.1-202ENST00000483289 TNP1P09430 55 aa3.66□□□□□ -1.82
AC008040.1-202ENST00000483289 ATRQ13535 2644 aa3.65□□□□□ -1.82
AC008040.1-202ENST00000483289 NBEAQ8NFP9 2946 aa3.65□□□□□ -1.83
AC008040.1-202ENST00000483289 MAST4O15021 2626 aa3.65□□□□□ -1.83
AC008040.1-202ENST00000483289 DCHS1Q96JQ0 3298 aa3.65□□□□□ -1.83
AC008040.1-202ENST00000483289 P0C880 135 aa3.65□□□□□ -1.83
AC008040.1-202ENST00000483289 HELZ2Q9BYK8 2649 aaKnown RBP3.64□□□□□ -1.83
AC008040.1-202ENST00000483289 KRTAP10-8P60410 259 aa3.63□□□□□ -1.83
AC008040.1-202ENST00000483289 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
AC008040.1-202ENST00000483289 WDFY3Q8IZQ1 3526 aa3.6□□□□□ -1.83
AC008040.1-202ENST00000483289 CFAP47Q6ZTR5 3102 aa3.6□□□□□ -1.83
AC008040.1-202ENST00000483289 MGAM2Q2M2H8 2515 aa3.6□□□□□ -1.83
AC008040.1-202ENST00000483289 CENPEQ02224 2701 aa3.58□□□□□ -1.84
AC008040.1-202ENST00000483289 BOD1L1Q8NFC6 3051 aa3.58□□□□□ -1.84
AC008040.1-202ENST00000483289 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms