RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 ITPR3Q14573 2671 aa8.24□□□□□ -1.09
CACNA1D-206ENST00000481478 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
CACNA1D-206ENST00000481478 HECTD1Q9ULT8 2610 aa8.22□□□□□ -1.09
CACNA1D-206ENST00000481478 CELSR3Q9NYQ7 3312 aa8.21□□□□□ -1.1
CACNA1D-206ENST00000481478 CENPEQ02224 2701 aa8.2□□□□□ -1.1
CACNA1D-206ENST00000481478 CASC10Q5T4H9 136 aa8.19□□□□□ -1.1
CACNA1D-206ENST00000481478 SPTBN5Q9NRC6 3674 aaKnown RBP8.19□□□□□ -1.1
CACNA1D-206ENST00000481478 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
CACNA1D-206ENST00000481478 TNRC18O15417 2968 aaPredicted RBP8.18□□□□□ -1.1
CACNA1D-206ENST00000481478 FRYQ5TBA9 3013 aa8.17□□□□□ -1.1
CACNA1D-206ENST00000481478 TNP2Q05952 138 aa8.16□□□□□ -1.1
CACNA1D-206ENST00000481478 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.1
CACNA1D-206ENST00000481478 S4R3F8 94 aa8.15□□□□□ -1.1
CACNA1D-206ENST00000481478 CFAP46Q8IYW2 2715 aa8.14□□□□□ -1.11
CACNA1D-206ENST00000481478 SEC61BP60468 96 aaKnown RBP8.13□□□□□ -1.11
CACNA1D-206ENST00000481478 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
CACNA1D-206ENST00000481478 USP24Q9UPU5 2620 aa8.12□□□□□ -1.11
CACNA1D-206ENST00000481478 A0A0A0MQY5 61 aa8.12□□□□□ -1.11
CACNA1D-206ENST00000481478 WIPF1O43516 503 aa8.11□□□□□ -1.11
CACNA1D-206ENST00000481478 Q75L30 129 aa8.1□□□□□ -1.11
CACNA1D-206ENST00000481478 FRYLO94915 3013 aa8.1□□□□□ -1.11
CACNA1D-206ENST00000481478 HELZ2Q9BYK8 2649 aaKnown RBP8.09□□□□□ -1.11
CACNA1D-206ENST00000481478 PLAC8Q9NZF1 115 aa8.09□□□□□ -1.11
CACNA1D-206ENST00000481478 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
CACNA1D-206ENST00000481478 NBEAQ8NFP9 2946 aa8.07□□□□□ -1.12
CACNA1D-206ENST00000481478 FLNBO75369 2602 aaKnown RBP8.07□□□□□ -1.12
CACNA1D-206ENST00000481478 COL6A3P12111 3177 aa8.06□□□□□ -1.12
CACNA1D-206ENST00000481478 LINC01558Q9Y6Z2 57 aa8.06□□□□□ -1.12
CACNA1D-206ENST00000481478 EYSQ5T1H1 3165 aa8.06□□□□□ -1.12
CACNA1D-206ENST00000481478 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
CACNA1D-206ENST00000481478 ATRQ13535 2644 aa8.05□□□□□ -1.12
CACNA1D-206ENST00000481478 R4GN34 69 aa8.04□□□□□ -1.12
CACNA1D-206ENST00000481478 BOD1L1Q8NFC6 3051 aa8.03□□□□□ -1.12
CACNA1D-206ENST00000481478 SPEGQ15772 3267 aa8.03□□□□□ -1.12
CACNA1D-206ENST00000481478 MMP24-AS1A0A0U1RRL7 71 aa8.02□□□□□ -1.13
CACNA1D-206ENST00000481478 ADGRG4Q8IZF6 3080 aa8.01□□□□□ -1.13
CACNA1D-206ENST00000481478 SPRR1BP22528 89 aa7.97□□□□□ -1.13
CACNA1D-206ENST00000481478 MAP1AP78559 2803 aaPredicted RBP7.97□□□□□ -1.13
CACNA1D-206ENST00000481478 DMXL2Q8TDJ6 3036 aa7.96□□□□□ -1.13
CACNA1D-206ENST00000481478 FREM2Q5SZK8 3169 aa7.95□□□□□ -1.14
CACNA1D-206ENST00000481478 SPINK7P58062 85 aa7.95□□□□□ -1.14
CACNA1D-206ENST00000481478 SPRR1AP35321 89 aa7.95□□□□□ -1.14
CACNA1D-206ENST00000481478 Q5W150 140 aa7.95□□□□□ -1.14
CACNA1D-206ENST00000481478 CHD6Q8TD26 2715 aa7.94□□□□□ -1.14
CACNA1D-206ENST00000481478 Q8N9P0 234 aaPredicted RBP7.94□□□□□ -1.14
CACNA1D-206ENST00000481478 ATMQ13315 3056 aa7.93□□□□□ -1.14
CACNA1D-206ENST00000481478 TEX15Q9BXT5 2789 aa7.93□□□□□ -1.14
CACNA1D-206ENST00000481478 LRBAP50851 2863 aa7.93□□□□□ -1.14
CACNA1D-206ENST00000481478 Q8NDZ9 215 aa7.93□□□□□ -1.14
CACNA1D-206ENST00000481478 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
CACNA1D-206ENST00000481478 KALRNO60229 2985 aa7.92□□□□□ -1.14
CACNA1D-206ENST00000481478 USP34Q70CQ2 3546 aa7.91□□□□□ -1.14
CACNA1D-206ENST00000481478 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
CACNA1D-206ENST00000481478 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
CACNA1D-206ENST00000481478 FLNCQ14315 2725 aa7.89□□□□□ -1.15
CACNA1D-206ENST00000481478 OXTP01178 125 aa7.89□□□□□ -1.15
CACNA1D-206ENST00000481478 Q5VSD8 79 aa7.89□□□□□ -1.15
CACNA1D-206ENST00000481478 UNC79Q9P2D8 2635 aa7.89□□□□□ -1.15
CACNA1D-206ENST00000481478 MAST4O15021 2626 aa7.88□□□□□ -1.15
CACNA1D-206ENST00000481478 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
CACNA1D-206ENST00000481478 DMXL1Q9Y485 3027 aa7.87□□□□□ -1.15
CACNA1D-206ENST00000481478 ROMO1P60602 79 aa7.86□□□□□ -1.15
CACNA1D-206ENST00000481478 MGAM2Q2M2H8 2515 aa7.86□□□□□ -1.15
CACNA1D-206ENST00000481478 KRTAP26-1Q6PEX3 210 aa7.84□□□□□ -1.15
CACNA1D-206ENST00000481478 GCN1Q92616 2671 aaKnown RBP7.84□□□□□ -1.15
CACNA1D-206ENST00000481478 M0QZ58 72 aa7.84□□□□□ -1.15
CACNA1D-206ENST00000481478 LCE6AA0A183 80 aa7.84□□□□□ -1.15
CACNA1D-206ENST00000481478 SETXQ7Z333 2677 aaKnown RBP7.83□□□□□ -1.16
CACNA1D-206ENST00000481478 COL12A1Q99715 3063 aa7.81□□□□□ -1.16
CACNA1D-206ENST00000481478 LOC400499M0QZD8 3231 aa7.81□□□□□ -1.16
CACNA1D-206ENST00000481478 MYO15AQ9UKN7 3530 aa7.8□□□□□ -1.16
CACNA1D-206ENST00000481478 H1FX-AS1Q4G0G2 97 aa7.79□□□□□ -1.16
CACNA1D-206ENST00000481478 ITPR1Q14643 2758 aa7.78□□□□□ -1.16
CACNA1D-206ENST00000481478 TACC2O95359 2948 aa7.78□□□□□ -1.16
CACNA1D-206ENST00000481478 HRNRQ86YZ3 2850 aaPredicted RBP7.77□□□□□ -1.17
CACNA1D-206ENST00000481478 Q5VV11 94 aa7.77□□□□□ -1.17
CACNA1D-206ENST00000481478 UTP20O75691 2785 aaKnown RBP7.76□□□□□ -1.17
CACNA1D-206ENST00000481478 PRAC1Q96KF2 57 aa7.75□□□□□ -1.17
CACNA1D-206ENST00000481478 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
CACNA1D-206ENST00000481478 ZZEF1O43149 2961 aa7.73□□□□□ -1.17
CACNA1D-206ENST00000481478 TEP1Q99973 2627 aaKnown RBP7.73□□□□□ -1.17
CACNA1D-206ENST00000481478 NBEAL2Q6ZNJ1 2754 aa7.72□□□□□ -1.17
CACNA1D-206ENST00000481478 KRTAP10-1P60331 282 aa7.7□□□□□ -1.18
CACNA1D-206ENST00000481478 ADM2Q7Z4H4 148 aa7.69□□□□□ -1.18
CACNA1D-206ENST00000481478 Q5XG85 94 aa7.69□□□□□ -1.18
CACNA1D-206ENST00000481478 H3BS24 57 aa7.68□□□□□ -1.18
CACNA1D-206ENST00000481478 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
CACNA1D-206ENST00000481478 Q6ZR54 194 aa7.66□□□□□ -1.18
CACNA1D-206ENST00000481478 UBR5O95071 2799 aaPredicted RBP7.65□□□□□ -1.19
CACNA1D-206ENST00000481478 PANO1I0J062 215 aa7.64□□□□□ -1.19
CACNA1D-206ENST00000481478 CYSTM1Q9H1C7 97 aa7.64□□□□□ -1.19
CACNA1D-206ENST00000481478 APCP25054 2843 aa7.64□□□□□ -1.19
CACNA1D-206ENST00000481478 COL6A5A8TX70 2615 aa7.63□□□□□ -1.19
CACNA1D-206ENST00000481478 KRTAP4-16G5E9R7 235 aaPredicted RBP7.63□□□□□ -1.19
CACNA1D-206ENST00000481478 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
CACNA1D-206ENST00000481478 CFAP47Q6ZTR5 3102 aa7.62□□□□□ -1.19
CACNA1D-206ENST00000481478 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
CACNA1D-206ENST00000481478 KRTAP10-2P60368 255 aa7.61□□□□□ -1.19
CACNA1D-206ENST00000481478 ZANQ9Y493 2812 aa7.6□□□□□ -1.19
CACNA1D-206ENST00000481478 ITPR2Q14571 2701 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms