RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 C5orf42Q9H799 3197 aa5.94□□□□□ -1.46
GARNL3-216ENST00000481242 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
GARNL3-216ENST00000481242 IGSF10Q6WRI0 2623 aa5.94□□□□□ -1.46
GARNL3-216ENST00000481242 A0A087X002 238 aa5.94□□□□□ -1.46
GARNL3-216ENST00000481242 Q6ZSA8 131 aa5.93□□□□□ -1.46
GARNL3-216ENST00000481242 A0A0G2JQZ4 141 aa5.92□□□□□ -1.46
GARNL3-216ENST00000481242 IGLV8-61A0A075B6I0 122 aa5.91□□□□□ -1.46
GARNL3-216ENST00000481242 LCE6AA0A183 80 aa5.91□□□□□ -1.46
GARNL3-216ENST00000481242 SPRR1AP35321 89 aa5.91□□□□□ -1.46
GARNL3-216ENST00000481242 GCN1Q92616 2671 aaKnown RBP5.91□□□□□ -1.46
GARNL3-216ENST00000481242 PRR26Q8N8Z3 221 aa5.9□□□□□ -1.47
GARNL3-216ENST00000481242 SPRR1BP22528 89 aa5.89□□□□□ -1.47
GARNL3-216ENST00000481242 MGAQ8IWI9 3026 aa5.88□□□□□ -1.47
GARNL3-216ENST00000481242 A6NN06 94 aa5.87□□□□□ -1.47
GARNL3-216ENST00000481242 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
GARNL3-216ENST00000481242 RANBP2P49792 3224 aaKnown RBP5.86□□□□□ -1.47
GARNL3-216ENST00000481242 UBR5O95071 2799 aaPredicted RBP5.86□□□□□ -1.47
GARNL3-216ENST00000481242 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
GARNL3-216ENST00000481242 NSD1Q96L73 2696 aaPredicted RBP5.85□□□□□ -1.47
GARNL3-216ENST00000481242 CRIPTQ9P021 101 aa5.85□□□□□ -1.47
GARNL3-216ENST00000481242 DSPP15924 2871 aaKnown RBP5.85□□□□□ -1.47
GARNL3-216ENST00000481242 MAP1AP78559 2803 aaPredicted RBP5.83□□□□□ -1.48
GARNL3-216ENST00000481242 BRCA2P51587 3418 aa5.82□□□□□ -1.48
GARNL3-216ENST00000481242 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
GARNL3-216ENST00000481242 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
GARNL3-216ENST00000481242 Q8N1X5 172 aa5.8□□□□□ -1.48
GARNL3-216ENST00000481242 KRTAP21-3Q3LHN1 58 aa5.79□□□□□ -1.48
GARNL3-216ENST00000481242 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
GARNL3-216ENST00000481242 KRTAP1-5Q9BYS1 174 aa5.79□□□□□ -1.48
GARNL3-216ENST00000481242 ZCCHC13Q8WW36 166 aaKnown RBP5.79□□□□□ -1.48
GARNL3-216ENST00000481242 A0A0C4DFX4 3053 aa5.79□□□□□ -1.48
GARNL3-216ENST00000481242 STAB2Q8WWQ8 2551 aa5.79□□□□□ -1.48
GARNL3-216ENST00000481242 Q8NDZ9 215 aa5.77□□□□□ -1.49
GARNL3-216ENST00000481242 Q5VSD8 79 aa5.77□□□□□ -1.49
GARNL3-216ENST00000481242 ITPR2Q14571 2701 aa5.77□□□□□ -1.49
GARNL3-216ENST00000481242 CSAG1Q6PB30 78 aa5.77□□□□□ -1.49
GARNL3-216ENST00000481242 Q6ZR54 194 aa5.76□□□□□ -1.49
GARNL3-216ENST00000481242 CFAP54Q96N23 3096 aa5.76□□□□□ -1.49
GARNL3-216ENST00000481242 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
GARNL3-216ENST00000481242 M0R2T5 61 aa5.75□□□□□ -1.49
GARNL3-216ENST00000481242 KRTAP10-1P60331 282 aa5.74□□□□□ -1.49
GARNL3-216ENST00000481242 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
GARNL3-216ENST00000481242 LINC00472Q9H8W2 130 aa5.74□□□□□ -1.49
GARNL3-216ENST00000481242 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
GARNL3-216ENST00000481242 HRES1P13985 223 aa5.73□□□□□ -1.49
GARNL3-216ENST00000481242 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
GARNL3-216ENST00000481242 SPINK7P58062 85 aa5.73□□□□□ -1.49
GARNL3-216ENST00000481242 LINC00483Q53H64 154 aa5.71□□□□□ -1.5
GARNL3-216ENST00000481242 KRTAP10-2P60368 255 aa5.71□□□□□ -1.5
GARNL3-216ENST00000481242 KMT2BQ9UMN6 2715 aaPredicted RBP5.7□□□□□ -1.5
GARNL3-216ENST00000481242 LAMA3Q16787 3333 aa5.7□□□□□ -1.5
GARNL3-216ENST00000481242 FLNCQ14315 2725 aa5.7□□□□□ -1.5
GARNL3-216ENST00000481242 ITPR1Q14643 2758 aa5.69□□□□□ -1.5
GARNL3-216ENST00000481242 LAMA2P24043 3122 aaKnown RBP5.69□□□□□ -1.5
GARNL3-216ENST00000481242 WDFY4Q6ZS81 3184 aa5.68□□□□□ -1.5
GARNL3-216ENST00000481242 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
GARNL3-216ENST00000481242 MKI67P46013 3256 aaKnown RBP5.68□□□□□ -1.5
GARNL3-216ENST00000481242 A0A1B0GU33 70 aa5.68□□□□□ -1.5
GARNL3-216ENST00000481242 A0A0D9SG42 100 aa5.67□□□□□ -1.5
GARNL3-216ENST00000481242 SPATA8Q6RVD6 105 aa5.67□□□□□ -1.5
GARNL3-216ENST00000481242 NBEAL2Q6ZNJ1 2754 aa5.66□□□□□ -1.5
GARNL3-216ENST00000481242 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
GARNL3-216ENST00000481242 S4R3F8 94 aa5.66□□□□□ -1.5
GARNL3-216ENST00000481242 Q5W150 140 aa5.65□□□□□ -1.5
GARNL3-216ENST00000481242 KRTAP4-16G5E9R7 235 aaPredicted RBP5.63□□□□□ -1.51
GARNL3-216ENST00000481242 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
GARNL3-216ENST00000481242 USP34Q70CQ2 3546 aa5.62□□□□□ -1.51
GARNL3-216ENST00000481242 HIVEP1P15822 2718 aa5.61□□□□□ -1.51
GARNL3-216ENST00000481242 TENM4Q6N022 2769 aa5.61□□□□□ -1.51
GARNL3-216ENST00000481242 PRUNE2Q8WUY3 3088 aa5.61□□□□□ -1.51
GARNL3-216ENST00000481242 TRIOO75962 3097 aa5.59□□□□□ -1.51
GARNL3-216ENST00000481242 Q6ZRN7 208 aaPredicted RBP5.58□□□□□ -1.52
GARNL3-216ENST00000481242 R4GN34 69 aa5.58□□□□□ -1.52
GARNL3-216ENST00000481242 FRYQ5TBA9 3013 aa5.58□□□□□ -1.52
GARNL3-216ENST00000481242 VPS13AQ96RL7 3174 aa5.57□□□□□ -1.52
GARNL3-216ENST00000481242 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
GARNL3-216ENST00000481242 NIPBLQ6KC79 2804 aaeCLIP5.57□□□□□ -1.52
GARNL3-216ENST00000481242 PANO1I0J062 215 aa5.57□□□□□ -1.52
GARNL3-216ENST00000481242 KRTAP3-3Q9BYR6 98 aa5.57□□□□□ -1.52
GARNL3-216ENST00000481242 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
GARNL3-216ENST00000481242 ROMO1P60602 79 aa5.55□□□□□ -1.52
GARNL3-216ENST00000481242 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
GARNL3-216ENST00000481242 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
GARNL3-216ENST00000481242 UNC80Q8N2C7 3258 aa5.52□□□□□ -1.53
GARNL3-216ENST00000481242 TACC2O95359 2948 aa5.5□□□□□ -1.53
GARNL3-216ENST00000481242 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
GARNL3-216ENST00000481242 UTP20O75691 2785 aaKnown RBP5.48□□□□□ -1.53
GARNL3-216ENST00000481242 REV3LO60673 3130 aa5.46□□□□□ -1.53
GARNL3-216ENST00000481242 CDH23Q9H251 3354 aa5.46□□□□□ -1.54
GARNL3-216ENST00000481242 XIRP2A4UGR9 3374 aa5.46□□□□□ -1.54
GARNL3-216ENST00000481242 COL12A1Q99715 3063 aa5.46□□□□□ -1.54
GARNL3-216ENST00000481242 APCP25054 2843 aa5.46□□□□□ -1.54
GARNL3-216ENST00000481242 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
GARNL3-216ENST00000481242 ATMQ13315 3056 aa5.44□□□□□ -1.54
GARNL3-216ENST00000481242 A8MU10 97 aa5.44□□□□□ -1.54
GARNL3-216ENST00000481242 FRYLO94915 3013 aa5.44□□□□□ -1.54
GARNL3-216ENST00000481242 KRTAP13-1Q8IUC0 172 aa5.43□□□□□ -1.54
GARNL3-216ENST00000481242 M0QZ58 72 aa5.42□□□□□ -1.54
GARNL3-216ENST00000481242 ADM2Q7Z4H4 148 aa5.42□□□□□ -1.54
GARNL3-216ENST00000481242 DNAH14Q0VDD8 3507 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms