RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CCDC168Q8NDH2 2452 aa6.7□□□□□ -1.34
SIK3-210ENST00000480468 CACNA1AO00555 2505 aa6.7□□□□□ -1.34
SIK3-210ENST00000480468 A0A0G2JQZ4 141 aa6.69□□□□□ -1.34
SIK3-210ENST00000480468 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
SIK3-210ENST00000480468 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
SIK3-210ENST00000480468 LINC00472Q9H8W2 130 aa6.68□□□□□ -1.34
SIK3-210ENST00000480468 FLNAP21333 2647 aaKnown RBP6.68□□□□□ -1.34
SIK3-210ENST00000480468 KRTAP1-1Q07627 177 aa6.68□□□□□ -1.34
SIK3-210ENST00000480468 UNC79Q9P2D8 2635 aa6.65□□□□□ -1.34
SIK3-210ENST00000480468 MMP24-AS1A0A0U1RRL7 71 aa6.65□□□□□ -1.35
SIK3-210ENST00000480468 TP53AIP1Q9HCN2 124 aa6.65□□□□□ -1.35
SIK3-210ENST00000480468 MTORP42345 2549 aa6.65□□□□□ -1.35
SIK3-210ENST00000480468 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
SIK3-210ENST00000480468 HIVEP1P15822 2718 aa6.64□□□□□ -1.35
SIK3-210ENST00000480468 SPRR1BP22528 89 aa6.63□□□□□ -1.35
SIK3-210ENST00000480468 SPAG11AQ6PDA7 123 aa6.63□□□□□ -1.35
SIK3-210ENST00000480468 UBR5O95071 2799 aaPredicted RBP6.63□□□□□ -1.35
SIK3-210ENST00000480468 VWFP04275 2813 aa6.63□□□□□ -1.35
SIK3-210ENST00000480468 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
SIK3-210ENST00000480468 Q6ZR54 194 aa6.62□□□□□ -1.35
SIK3-210ENST00000480468 SPINK7P58062 85 aa6.61□□□□□ -1.35
SIK3-210ENST00000480468 PCOTHQ58A44 107 aa6.6□□□□□ -1.35
SIK3-210ENST00000480468 ZNF462Q96JM2 2506 aa6.59□□□□□ -1.35
SIK3-210ENST00000480468 C8orf87E5RJ46 101 aa6.59□□□□□ -1.35
SIK3-210ENST00000480468 HRES1P13985 223 aa6.58□□□□□ -1.36
SIK3-210ENST00000480468 PRLHP81277 87 aa6.58□□□□□ -1.36
SIK3-210ENST00000480468 H0Y9J4 135 aa6.58□□□□□ -1.36
SIK3-210ENST00000480468 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
SIK3-210ENST00000480468 IGKV2-24A0A0C4DH68 120 aa6.57□□□□□ -1.36
SIK3-210ENST00000480468 C11orf45Q8TAV5 145 aa6.57□□□□□ -1.36
SIK3-210ENST00000480468 F8P00451 2351 aa6.56□□□□□ -1.36
SIK3-210ENST00000480468 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
SIK3-210ENST00000480468 ACANP16112 2415 aa6.56□□□□□ -1.36
SIK3-210ENST00000480468 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
SIK3-210ENST00000480468 A0A087X002 238 aa6.54□□□□□ -1.36
SIK3-210ENST00000480468 LINC00313P59037 77 aa6.54□□□□□ -1.36
SIK3-210ENST00000480468 OTOGQ6ZRI0 2925 aa6.52□□□□□ -1.37
SIK3-210ENST00000480468 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
SIK3-210ENST00000480468 LCE2DQ5TA82 110 aaPredicted RBP6.52□□□□□ -1.37
SIK3-210ENST00000480468 DNAH1Q9P2D7 4330 aa6.52□□□□□ -1.37
SIK3-210ENST00000480468 C8orf17Q9NRJ1 99 aa6.52□□□□□ -1.37
SIK3-210ENST00000480468 Q96NJ1 140 aa6.51□□□□□ -1.37
SIK3-210ENST00000480468 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
SIK3-210ENST00000480468 USP24Q9UPU5 2620 aa6.5□□□□□ -1.37
SIK3-210ENST00000480468 A0A096LNI7 61 aa6.5□□□□□ -1.37
SIK3-210ENST00000480468 KMT2BQ9UMN6 2715 aaPredicted RBP6.49□□□□□ -1.37
SIK3-210ENST00000480468 TENM2Q9NT68 2774 aa6.47□□□□□ -1.37
SIK3-210ENST00000480468 NOTCH2Q04721 2471 aa6.47□□□□□ -1.37
SIK3-210ENST00000480468 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
SIK3-210ENST00000480468 A0A1B0GVX0 72 aa6.46□□□□□ -1.37
SIK3-210ENST00000480468 PRAC1Q96KF2 57 aa6.46□□□□□ -1.38
SIK3-210ENST00000480468 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
SIK3-210ENST00000480468 PDZD2O15018 2839 aa6.46□□□□□ -1.38
SIK3-210ENST00000480468 BAHCC1Q9P281 2608 aa6.45□□□□□ -1.38
SIK3-210ENST00000480468 ALMS1Q8TCU4 4167 aa6.45□□□□□ -1.38
SIK3-210ENST00000480468 PRR26Q8N8Z3 221 aa6.44□□□□□ -1.38
SIK3-210ENST00000480468 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
SIK3-210ENST00000480468 TENM1Q9UKZ4 2725 aa6.43□□□□□ -1.38
SIK3-210ENST00000480468 RTL8CO15255 209 aa6.43□□□□□ -1.38
SIK3-210ENST00000480468 ACYP2P14621 99 aa6.43□□□□□ -1.38
SIK3-210ENST00000480468 MDFIQ99750 246 aa6.43□□□□□ -1.38
SIK3-210ENST00000480468 TEP1Q99973 2627 aaKnown RBP6.43□□□□□ -1.38
SIK3-210ENST00000480468 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
SIK3-210ENST00000480468 IGHV6-1A0A0B4J1U7 121 aa6.41□□□□□ -1.38
SIK3-210ENST00000480468 KRTAP13-1Q8IUC0 172 aa6.41□□□□□ -1.38
SIK3-210ENST00000480468 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
SIK3-210ENST00000480468 TENM3Q9P273 2699 aa6.4□□□□□ -1.38
SIK3-210ENST00000480468 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
SIK3-210ENST00000480468 CDK2AP2O75956 126 aa6.4□□□□□ -1.39
SIK3-210ENST00000480468 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.39
SIK3-210ENST00000480468 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
SIK3-210ENST00000480468 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
SIK3-210ENST00000480468 SMR3AQ99954 134 aa6.38□□□□□ -1.39
SIK3-210ENST00000480468 LINC00483Q53H64 154 aa6.37□□□□□ -1.39
SIK3-210ENST00000480468 A0A1B0GU69 56 aa6.36□□□□□ -1.39
SIK3-210ENST00000480468 TRRAPQ9Y4A5 3859 aa6.36□□□□□ -1.39
SIK3-210ENST00000480468 ATRQ13535 2644 aa6.36□□□□□ -1.39
SIK3-210ENST00000480468 CHTF8P0CG12 524 aa6.35□□□□□ -1.39
SIK3-210ENST00000480468 C14orf177Q52M58 125 aa6.35□□□□□ -1.39
SIK3-210ENST00000480468 ITPR2Q14571 2701 aa6.35□□□□□ -1.39
SIK3-210ENST00000480468 H3BS24 57 aa6.34□□□□□ -1.39
SIK3-210ENST00000480468 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
SIK3-210ENST00000480468 OXLD1Q5BKU9 147 aa6.34□□□□□ -1.39
SIK3-210ENST00000480468 Q5W150 140 aa6.34□□□□□ -1.39
SIK3-210ENST00000480468 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
SIK3-210ENST00000480468 K7EIL1 84 aa6.33□□□□□ -1.4
SIK3-210ENST00000480468 UQCR11O14957 56 aa6.33□□□□□ -1.4
SIK3-210ENST00000480468 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
SIK3-210ENST00000480468 ANK2Q01484 3957 aa6.31□□□□□ -1.4
SIK3-210ENST00000480468 FASNP49327 2511 aaKnown RBP6.31□□□□□ -1.4
SIK3-210ENST00000480468 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
SIK3-210ENST00000480468 ZNF706Q9Y5V0 76 aaPredicted RBP6.3□□□□□ -1.4
SIK3-210ENST00000480468 KRTAP1-5Q9BYS1 174 aa6.29□□□□□ -1.4
SIK3-210ENST00000480468 NSD1Q96L73 2696 aaPredicted RBP6.29□□□□□ -1.4
SIK3-210ENST00000480468 WWC2-AS2Q96NR7 200 aa6.29□□□□□ -1.4
SIK3-210ENST00000480468 INAFM1C9JVW0 142 aa6.28□□□□□ -1.4
SIK3-210ENST00000480468 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
SIK3-210ENST00000480468 TENM4Q6N022 2769 aa6.26□□□□□ -1.41
SIK3-210ENST00000480468 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
SIK3-210ENST00000480468 HELZ2Q9BYK8 2649 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms