RNA–Protein interactions for RNA: ENST00000479853.1

SDHAF3-203, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 2

Gene SDHAF3, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-203ENST00000479853 CSPG4Q6UVK1 2322 aa0.33□□□□□ -2.36
SDHAF3-203ENST00000479853 CELSR1Q9NYQ6 3014 aa0.33□□□□□ -2.36
SDHAF3-203ENST00000479853 ABCA2Q9BZC7 2435 aa0.32□□□□□ -2.36
SDHAF3-203ENST00000479853 LOC730098B7Z3J9 87 aa0.32□□□□□ -2.36
SDHAF3-203ENST00000479853 M0R2T5 61 aa0.32□□□□□ -2.36
SDHAF3-203ENST00000479853 CACNA1AO00555 2505 aa0.31□□□□□ -2.36
SDHAF3-203ENST00000479853 SPRR2DP22532 72 aa0.31□□□□□ -2.36
SDHAF3-203ENST00000479853 SPTA1P02549 2419 aa0.3□□□□□ -2.36
SDHAF3-203ENST00000479853 KMT2DO14686 5537 aa0.3□□□□□ -2.36
SDHAF3-203ENST00000479853 KNL1Q8NG31 2342 aa0.3□□□□□ -2.36
SDHAF3-203ENST00000479853 PKD1L1Q8TDX9 2849 aa0.29□□□□□ -2.36
SDHAF3-203ENST00000479853 EP300Q09472 2414 aaPredicted RBP0.29□□□□□ -2.36
SDHAF3-203ENST00000479853 LY75O60449 1722 aa0.28□□□□□ -2.36
SDHAF3-203ENST00000479853 SFTA3P0C7M3 94 aa0.28□□□□□ -2.36
SDHAF3-203ENST00000479853 DEFB135Q30KP9 77 aa0.28□□□□□ -2.36
SDHAF3-203ENST00000479853 S100ZQ8WXG8 99 aa0.28□□□□□ -2.36
SDHAF3-203ENST00000479853 KIAA0586Q9BVV6 1533 aa0.28□□□□□ -2.37
SDHAF3-203ENST00000479853 ALS2Q96Q42 1657 aa0.27□□□□□ -2.37
SDHAF3-203ENST00000479853 UBR5O95071 2799 aaPredicted RBP0.27□□□□□ -2.37
SDHAF3-203ENST00000479853 IAPPP10997 89 aa0.27□□□□□ -2.37
SDHAF3-203ENST00000479853 DEFB130BP0DP73 79 aa0.26□□□□□ -2.37
SDHAF3-203ENST00000479853 DEFB130AP0DP74 79 aa0.26□□□□□ -2.37
SDHAF3-203ENST00000479853 ABCA10Q8WWZ4 1543 aa0.26□□□□□ -2.37
SDHAF3-203ENST00000479853 ITSN2Q9NZM3 1697 aa0.25□□□□□ -2.37
SDHAF3-203ENST00000479853 TRANK1O15050 2925 aa0.25□□□□□ -2.37
SDHAF3-203ENST00000479853 CHD8Q9HCK8 2581 aa0.25□□□□□ -2.37
SDHAF3-203ENST00000479853 HSPG2P98160 4391 aa0.24□□□□□ -2.37
SDHAF3-203ENST00000479853 DMBT1Q9UGM3 2413 aaPredicted RBP0.24□□□□□ -2.37
SDHAF3-203ENST00000479853 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
SDHAF3-203ENST00000479853 HMCN2Q8NDA2 5059 aa0.23□□□□□ -2.37
SDHAF3-203ENST00000479853 MAST1Q9Y2H9 1570 aa0.23□□□□□ -2.37
SDHAF3-203ENST00000479853 HECTD4Q9Y4D8 3996 aa0.22□□□□□ -2.37
SDHAF3-203ENST00000479853 PRXQ9BXM0 1461 aa0.22□□□□□ -2.37
SDHAF3-203ENST00000479853 AKAP13Q12802 2813 aa0.21□□□□□ -2.38
SDHAF3-203ENST00000479853 BPTFQ12830 3046 aa0.21□□□□□ -2.38
SDHAF3-203ENST00000479853 KIF1AQ12756 1690 aa0.21□□□□□ -2.38
SDHAF3-203ENST00000479853 PREX2Q70Z35 1606 aa0.2□□□□□ -2.38
SDHAF3-203ENST00000479853 SPRR2BP35325 72 aa0.2□□□□□ -2.38
SDHAF3-203ENST00000479853 UGGT1Q9NYU2 1555 aa0.19□□□□□ -2.38
SDHAF3-203ENST00000479853 FSIP2Q5CZC0 6907 aa0.18□□□□□ -2.38
SDHAF3-203ENST00000479853 K7EMI3 77 aa0.18□□□□□ -2.38
SDHAF3-203ENST00000479853 DSPP15924 2871 aaKnown RBP0.18□□□□□ -2.38
SDHAF3-203ENST00000479853 CPS1P31327 1500 aa0.18□□□□□ -2.38
SDHAF3-203ENST00000479853 PDE4DIPQ5VU43 2346 aa0.18□□□□□ -2.38
SDHAF3-203ENST00000479853 SETXQ7Z333 2677 aaKnown RBP0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 M0R1W7 72 aa0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 RPS27P42677 84 aaKnown RBP0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 SMIM5Q71RC9 77 aa0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 RPS27LQ71UM5 84 aaKnown RBP0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 LYSTQ99698 3801 aa0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 CROCC2H7BZ55 1655 aa0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 CLASP1Q7Z460 1538 aa0.17□□□□□ -2.38
SDHAF3-203ENST00000479853 PKD1P98161 4303 aa0.16□□□□□ -2.38
SDHAF3-203ENST00000479853 MINOS1Q5TGZ0 78 aa0.16□□□□□ -2.38
SDHAF3-203ENST00000479853 COL7A1Q02388 2944 aa0.16□□□□□ -2.38
SDHAF3-203ENST00000479853 LRP1BQ9NZR2 4599 aa0.15□□□□□ -2.38
SDHAF3-203ENST00000479853 IGIPA6NJ69 53 aa0.15□□□□□ -2.39
SDHAF3-203ENST00000479853 PKHD1P08F94 4074 aa0.14□□□□□ -2.39
SDHAF3-203ENST00000479853 EEA1Q15075 1411 aa0.14□□□□□ -2.39
SDHAF3-203ENST00000479853 ACANP16112 2415 aa0.14□□□□□ -2.39
SDHAF3-203ENST00000479853 TOGARAM1Q9Y4F4 1720 aa0.14□□□□□ -2.39
SDHAF3-203ENST00000479853 NCBP2-AS2Q69YL0 99 aa0.14□□□□□ -2.39
SDHAF3-203ENST00000479853 NSD1Q96L73 2696 aaPredicted RBP0.14□□□□□ -2.39
SDHAF3-203ENST00000479853 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 H0YGG7 62 aa0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 FCER1GP30273 86 aa0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 S4R3F8 94 aa0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 MAP1BP46821 2468 aaKnown RBP0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 HECTD1Q9ULT8 2610 aa0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 PCNX1Q96RV3 2341 aa0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 SYCP2Q9BX26 1530 aa0.13□□□□□ -2.39
SDHAF3-203ENST00000479853 LRP2P98164 4655 aa0.12□□□□□ -2.39
SDHAF3-203ENST00000479853 MROH2AA6NES4 1674 aa0.12□□□□□ -2.39
SDHAF3-203ENST00000479853 TNRC18O15417 2968 aaPredicted RBP0.12□□□□□ -2.39
SDHAF3-203ENST00000479853 PRLHP81277 87 aa0.12□□□□□ -2.39
SDHAF3-203ENST00000479853 FLNCQ14315 2725 aa0.12□□□□□ -2.39
SDHAF3-203ENST00000479853 PRRC2CQ9Y520 2896 aaKnown RBP0.12□□□□□ -2.39
SDHAF3-203ENST00000479853 CDC42BPAQ5VT25 1732 aa0.11□□□□□ -2.39
SDHAF3-203ENST00000479853 VPS13BQ7Z7G8 4022 aa0.11□□□□□ -2.39
SDHAF3-203ENST00000479853 WT1-ASQ06250 92 aa0.11□□□□□ -2.39
SDHAF3-203ENST00000479853 C6orf48Q9UBA6 75 aa0.11□□□□□ -2.39
SDHAF3-203ENST00000479853 APC2O95996 2303 aa0.11□□□□□ -2.39
SDHAF3-203ENST00000479853 DEFB106AQ8N104 65 aa0.1□□□□□ -2.39
SDHAF3-203ENST00000479853 NMES1Q9C002 83 aa0.1□□□□□ -2.39
SDHAF3-203ENST00000479853 ANKRD36CQ5JPF3 1778 aa0.09□□□□□ -2.39
SDHAF3-203ENST00000479853 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
SDHAF3-203ENST00000479853 COL6A3P12111 3177 aa0.08□□□□□ -2.4
SDHAF3-203ENST00000479853 SERF2P84101 59 aa0.08□□□□□ -2.4
SDHAF3-203ENST00000479853 AGLP35573 1532 aa0.08□□□□□ -2.4
SDHAF3-203ENST00000479853 CREBBPQ92793 2442 aa0.07□□□□□ -2.4
SDHAF3-203ENST00000479853 KRTAP6-2Q3LI66 62 aa0.07□□□□□ -2.4
SDHAF3-203ENST00000479853 DCHS2Q6V1P9 2916 aa0.07□□□□□ -2.4
SDHAF3-203ENST00000479853 FLNBO75369 2602 aaKnown RBP0.06□□□□□ -2.4
SDHAF3-203ENST00000479853 NBASA2RRP1 2371 aa0.04□□□□□ -2.4
SDHAF3-203ENST00000479853 FLGP20930 4061 aaPredicted RBP0.04□□□□□ -2.4
SDHAF3-203ENST00000479853 ADCY10Q96PN6 1610 aa0.03□□□□□ -2.4
SDHAF3-203ENST00000479853 SPRR2AP35326 72 aa0.03□□□□□ -2.4
SDHAF3-203ENST00000479853 FANCD2Q9BXW9 1451 aa0.03□□□□□ -2.41
SDHAF3-203ENST00000479853 NRXN3Q9Y4C0 1643 aa0.02□□□□□ -2.41
SDHAF3-203ENST00000479853 DNAH9Q9NYC9 4486 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms