RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PRO1854Q9UHT4 67 aa8.92□□□□□ -0.98
C9orf3-217ENST00000479161 TEX49A0A1B0GTD5 131 aa8.91□□□□□ -0.98
C9orf3-217ENST00000479161 J3QR89 54 aa8.91□□□□□ -0.98
C9orf3-217ENST00000479161 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
C9orf3-217ENST00000479161 CFC1P0CG37 223 aa8.91□□□□□ -0.98
C9orf3-217ENST00000479161 VPS25Q9BRG1 176 aa8.91□□□□□ -0.98
C9orf3-217ENST00000479161 SLC25A20O43772 301 aa8.9□□□□□ -0.98
C9orf3-217ENST00000479161 MOBPQ13875 183 aa8.9□□□□□ -0.98
C9orf3-217ENST00000479161 LAMTOR3Q9UHA4 124 aa8.9□□□□□ -0.98
C9orf3-217ENST00000479161 PRO0461Q9UI25 63 aa8.9□□□□□ -0.98
C9orf3-217ENST00000479161 IGLV9-49A0A0B4J1Y8 123 aa8.89□□□□□ -0.99
C9orf3-217ENST00000479161 LINC00575Q6W349 94 aa8.89□□□□□ -0.99
C9orf3-217ENST00000479161 H3BMG7 143 aa8.87□□□□□ -0.99
C9orf3-217ENST00000479161 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
C9orf3-217ENST00000479161 PRR4Q16378 134 aa8.87□□□□□ -0.99
C9orf3-217ENST00000479161 hADV29S1A0JD25 119 aa8.85□□□□□ -0.99
C9orf3-217ENST00000479161 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
C9orf3-217ENST00000479161 LPAP08519 4548 aa8.84□□□□□ -0.99
C9orf3-217ENST00000479161 RNF213Q63HN8 5207 aa8.84□□□□□ -0.99
C9orf3-217ENST00000479161 H0YGX0 51 aa8.84□□□□□ -0.99
C9orf3-217ENST00000479161 LCE2DQ5TA82 110 aaPredicted RBP8.84□□□□□ -0.99
C9orf3-217ENST00000479161 C9orf153Q5TBE3 101 aa8.84□□□□□ -0.99
C9orf3-217ENST00000479161 SMIM29Q86T20 159 aa8.84□□□□□ -0.99
C9orf3-217ENST00000479161 PSMB2P49721 201 aa8.83□□□□□ -1
C9orf3-217ENST00000479161 CD164Q04900 197 aa8.83□□□□□ -1
C9orf3-217ENST00000479161 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.83□□□□□ -1
C9orf3-217ENST00000479161 Q8N377 158 aa8.83□□□□□ -1
C9orf3-217ENST00000479161 PPDPFLQ8WWR9 84 aa8.83□□□□□ -1
C9orf3-217ENST00000479161 TCL1BO95988 128 aa8.82□□□□□ -1
C9orf3-217ENST00000479161 PCP4P48539 62 aa8.82□□□□□ -1
C9orf3-217ENST00000479161 DEFB105AQ8NG35 78 aa8.82□□□□□ -1
C9orf3-217ENST00000479161 SNCGO76070 127 aa8.8□□□□□ -1
C9orf3-217ENST00000479161 SCGB1C2P0DMR2 95 aa8.8□□□□□ -1
C9orf3-217ENST00000479161 TPRXLQ17RH7 258 aa8.8□□□□□ -1
C9orf3-217ENST00000479161 ETDBQ3ZM63 59 aa8.8□□□□□ -1
C9orf3-217ENST00000479161 A0A1B0GX51 115 aa8.79□□□□□ -1
C9orf3-217ENST00000479161 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
C9orf3-217ENST00000479161 ATXN8Q156A1 80 aa8.79□□□□□ -1
C9orf3-217ENST00000479161 Q6ZQY7 126 aa8.79□□□□□ -1
C9orf3-217ENST00000479161 TEN1Q86WV5 123 aa8.79□□□□□ -1
C9orf3-217ENST00000479161 COX6CP09669 75 aa8.78□□□□□ -1
C9orf3-217ENST00000479161 Q1RN00 199 aa8.78□□□□□ -1
C9orf3-217ENST00000479161 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
C9orf3-217ENST00000479161 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
C9orf3-217ENST00000479161 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
C9orf3-217ENST00000479161 H7C2G1 150 aa8.76□□□□□ -1.01
C9orf3-217ENST00000479161 SCGB1A1P11684 91 aa8.76□□□□□ -1.01
C9orf3-217ENST00000479161 Q5XG85 94 aa8.76□□□□□ -1.01
C9orf3-217ENST00000479161 LIMD2Q9BT23 127 aa8.76□□□□□ -1.01
C9orf3-217ENST00000479161 GHRHP01286 108 aa8.75□□□□□ -1.01
C9orf3-217ENST00000479161 F8WEM9 126 aa8.73□□□□□ -1.01
C9orf3-217ENST00000479161 TRIAP1O43715 76 aa8.73□□□□□ -1.01
C9orf3-217ENST00000479161 Q6JHZ5 121 aa8.73□□□□□ -1.01
C9orf3-217ENST00000479161 H3BT86 120 aa8.72□□□□□ -1.01
C9orf3-217ENST00000479161 MTURNQ8N3F0 131 aa8.72□□□□□ -1.01
C9orf3-217ENST00000479161 SIGMAR1Q99720 223 aa8.72□□□□□ -1.01
C9orf3-217ENST00000479161 C9JAW5 83 aa8.71□□□□□ -1.02
C9orf3-217ENST00000479161 ANKRD29Q8N6D5 301 aa8.71□□□□□ -1.02
C9orf3-217ENST00000479161 LST1O00453 97 aa8.7□□□□□ -1.02
C9orf3-217ENST00000479161 FAM218AQ96MZ4 157 aa8.7□□□□□ -1.02
C9orf3-217ENST00000479161 H3BQ85 93 aa8.69□□□□□ -1.02
C9orf3-217ENST00000479161 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
C9orf3-217ENST00000479161 CDIP1Q9H305 208 aa8.67□□□□□ -1.02
C9orf3-217ENST00000479161 CLEC2BQ92478 149 aa8.66□□□□□ -1.02
C9orf3-217ENST00000479161 C21orf62-AS1Q17RA5 79 aa8.65□□□□□ -1.02
C9orf3-217ENST00000479161 TRACP01848 142 aa8.64□□□□□ -1.03
C9orf3-217ENST00000479161 HRCT1Q6UXD1 115 aa8.64□□□□□ -1.03
C9orf3-217ENST00000479161 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
C9orf3-217ENST00000479161 IGFL1Q6UW32 110 aa8.63□□□□□ -1.03
C9orf3-217ENST00000479161 NDUFV3P56181 108 aaKnown RBP8.62□□□□□ -1.03
C9orf3-217ENST00000479161 DNAL4O96015 105 aa8.61□□□□□ -1.03
C9orf3-217ENST00000479161 Q6Q795 121 aa8.61□□□□□ -1.03
C9orf3-217ENST00000479161 FAM240AA0A1B0GVK7 77 aa8.6□□□□□ -1.03
C9orf3-217ENST00000479161 A0A0G2JQZ4 141 aa8.59□□□□□ -1.03
C9orf3-217ENST00000479161 TRBV7-7A0A0K0K1E9 115 aa8.59□□□□□ -1.03
C9orf3-217ENST00000479161 TMEM256-PLSCR3K7ERE1 68 aa8.59□□□□□ -1.03
C9orf3-217ENST00000479161 C1orf195Q5TG92 126 aa8.59□□□□□ -1.03
C9orf3-217ENST00000479161 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
C9orf3-217ENST00000479161 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
C9orf3-217ENST00000479161 XP32Q5T750 250 aa8.54□□□□□ -1.04
C9orf3-217ENST00000479161 ACYP1P07311 99 aa8.53□□□□□ -1.04
C9orf3-217ENST00000479161 MUC2Q02817 5179 aa8.53□□□□□ -1.04
C9orf3-217ENST00000479161 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
C9orf3-217ENST00000479161 MT-ATP8P03928 68 aa8.51□□□□□ -1.05
C9orf3-217ENST00000479161 A0A1B0GV72 72 aa8.5□□□□□ -1.05
C9orf3-217ENST00000479161 SEC61BP60468 96 aaKnown RBP8.5□□□□□ -1.05
C9orf3-217ENST00000479161 BAALC-AS2P0C853 105 aa8.49□□□□□ -1.05
C9orf3-217ENST00000479161 TRBV7-4A0A0J9YYF1 115 aa8.47□□□□□ -1.05
C9orf3-217ENST00000479161 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
C9orf3-217ENST00000479161 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
C9orf3-217ENST00000479161 A0A1W2PNM2 257 aa8.45□□□□□ -1.06
C9orf3-217ENST00000479161 A0A0U1RQV1 116 aa8.44□□□□□ -1.06
C9orf3-217ENST00000479161 A0A087WSZ3 146 aa8.42□□□□□ -1.06
C9orf3-217ENST00000479161 RBM3P98179 157 aaKnown RBP8.42□□□□□ -1.06
C9orf3-217ENST00000479161 OBSCN-AS1Q96MR7 158 aa8.42□□□□□ -1.06
C9orf3-217ENST00000479161 IMUPQ9GZP8 106 aa8.41□□□□□ -1.06
C9orf3-217ENST00000479161 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
C9orf3-217ENST00000479161 LINC00643Q86TS7 51 aa8.4□□□□□ -1.06
C9orf3-217ENST00000479161 JMJD7-PLA2G4BH0Y9G9 81 aa8.39□□□□□ -1.07
C9orf3-217ENST00000479161 DSCR8Q96T75 97 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms