RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 A0A1B0GU69 56 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 IGLC3P0DOY3 106 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 PLGLAQ15195 96 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 C6orf201Q7Z4U5 140 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 UBE2D4Q9Y2X8 147 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 INO80Q9ULG1 1556 aaPredicted RBP0.64□□□□□ -2.31
GARNL3-214ENST00000478696 ALS2Q96Q42 1657 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 PPLO60437 1756 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 URB1O60287 2271 aaKnown RBP0.64□□□□□ -2.31
GARNL3-214ENST00000478696 LAMA5O15230 3695 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 MXRA5Q9NR99 2828 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 ACACAQ13085 2346 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.64□□□□□ -2.31
GARNL3-214ENST00000478696 CACNA1CQ13936 2221 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 C4AP0C0L4 1744 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 DOT1LQ8TEK3 1739 aa0.64□□□□□ -2.31
GARNL3-214ENST00000478696 RRBP1Q9P2E9 1410 aaKnown RBP0.64□□□□□ -2.31
GARNL3-214ENST00000478696 ADGRG4Q8IZF6 3080 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 NSD1Q96L73 2696 aaPredicted RBP0.63□□□□□ -2.31
GARNL3-214ENST00000478696 NBASA2RRP1 2371 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 PDCD11Q14690 1871 aaKnown RBP0.63□□□□□ -2.31
GARNL3-214ENST00000478696 RGPD2P0DJD1 1756 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 OTOGQ6ZRI0 2925 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 KIF1AQ12756 1690 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 LMO7Q8WWI1 1683 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 PRXQ9BXM0 1461 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 TRBV7-4A0A0J9YYF1 115 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 CEBPZOSA8MTT3 80 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 TP53AIP1Q9HCN2 124 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 C4BP0C0L5 1744 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 APCP25054 2843 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 MAP1AP78559 2803 aaPredicted RBP0.63□□□□□ -2.31
GARNL3-214ENST00000478696 ACANP16112 2415 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 CSPG4Q6UVK1 2322 aa0.63□□□□□ -2.31
GARNL3-214ENST00000478696 MGAM2Q2M2H8 2515 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 SPENQ96T58 3664 aaKnown RBP0.62□□□□□ -2.31
GARNL3-214ENST00000478696 LRRC37AA6NMS7 1700 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 DDX60Q8IY21 1712 aaKnown RBP0.62□□□□□ -2.31
GARNL3-214ENST00000478696 PRRC2CQ9Y520 2896 aaKnown RBP0.62□□□□□ -2.31
GARNL3-214ENST00000478696 IGLC2P0DOY2 106 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 PIGYQ3MUY2 71 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 BVES-AS1Q5T3Y7 98 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 APC2O95996 2303 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 CSMD1Q96PZ7 3565 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 CDC42BPGQ6DT37 1551 aa0.62□□□□□ -2.31
GARNL3-214ENST00000478696 MEGF8Q7Z7M0 2845 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 CSMD2Q7Z408 3487 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 BCORQ6W2J9 1755 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 LINC00959A0A1B0GUT2 108 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 A0A1B0GUT8 65 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 H3BUT2 72 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 I3L2K1 104 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 PRB3Q04118 309 aaPredicted RBP0.61□□□□□ -2.31
GARNL3-214ENST00000478696 AKAP6Q13023 2319 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 TSC2P49815 1807 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 WNK1Q9H4A3 2382 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
GARNL3-214ENST00000478696 ARFGEF2Q9Y6D5 1785 aa0.6□□□□□ -2.31
GARNL3-214ENST00000478696 TENM2Q9NT68 2774 aa0.6□□□□□ -2.31
GARNL3-214ENST00000478696 SCN7AQ01118 1682 aa0.6□□□□□ -2.31
GARNL3-214ENST00000478696 PRO0255Q9UI72 69 aa0.6□□□□□ -2.31
GARNL3-214ENST00000478696 PKDREJQ9NTG1 2253 aa0.6□□□□□ -2.31
GARNL3-214ENST00000478696 TACC2O95359 2948 aa0.6□□□□□ -2.31
GARNL3-214ENST00000478696 CCDC141Q6ZP82 1450 aa0.6□□□□□ -2.31
GARNL3-214ENST00000478696 PLXNB2O15031 1838 aa0.59□□□□□ -2.31
GARNL3-214ENST00000478696 FAM208AQ9UK61 1670 aaKnown RBP0.59□□□□□ -2.31
GARNL3-214ENST00000478696 ABCC6O95255 1503 aa0.59□□□□□ -2.31
GARNL3-214ENST00000478696 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.31
GARNL3-214ENST00000478696 DEFB121Q5J5C9 76 aa0.59□□□□□ -2.31
GARNL3-214ENST00000478696 Q8IZM0 81 aa0.59□□□□□ -2.31
GARNL3-214ENST00000478696 C18orf32Q8TCD1 76 aa0.59□□□□□ -2.31
GARNL3-214ENST00000478696 IQGAP3Q86VI3 1631 aa0.59□□□□□ -2.32
GARNL3-214ENST00000478696 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
GARNL3-214ENST00000478696 CUBNO60494 3623 aa0.58□□□□□ -2.32
GARNL3-214ENST00000478696 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
GARNL3-214ENST00000478696 ZANQ9Y493 2812 aa0.58□□□□□ -2.32
GARNL3-214ENST00000478696 A0A1B0GUL6 1792 aa0.58□□□□□ -2.32
GARNL3-214ENST00000478696 DEFB112Q30KQ8 113 aa0.58□□□□□ -2.32
GARNL3-214ENST00000478696 DNHD1Q96M86 4753 aa0.58□□□□□ -2.32
GARNL3-214ENST00000478696 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
GARNL3-214ENST00000478696 AKAP9Q99996 3911 aa0.57□□□□□ -2.32
GARNL3-214ENST00000478696 KNL1Q8NG31 2342 aa0.57□□□□□ -2.32
GARNL3-214ENST00000478696 KRTAP5-10Q6L8G5 202 aa0.57□□□□□ -2.32
GARNL3-214ENST00000478696 USMG5Q96IX5 58 aa0.57□□□□□ -2.32
GARNL3-214ENST00000478696 SMCO4Q9NRQ5 59 aa0.57□□□□□ -2.32
GARNL3-214ENST00000478696 MYH4Q9Y623 1939 aa0.57□□□□□ -2.32
GARNL3-214ENST00000478696 VPS13CQ709C8 3753 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 ANKARQ7Z5J8 1434 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 FXYD6-FXYD2A0A087WZ82 144 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 NDUFB1O75438 58 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 SMIM13P0DJ93 91 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 GAFA1Q96PS6 74 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 CRIPTQ9P021 101 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 PLCE1Q9P212 2302 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 ZNF831Q5JPB2 1677 aa0.56□□□□□ -2.32
GARNL3-214ENST00000478696 TRAV21A0A0B4J279 112 aa0.55□□□□□ -2.32
GARNL3-214ENST00000478696 K7EQZ3 153 aa0.55□□□□□ -2.32
GARNL3-214ENST00000478696 PDCD5O14737 125 aa0.55□□□□□ -2.32
GARNL3-214ENST00000478696 CFDP00746 253 aaPredicted RBP0.55□□□□□ -2.32
GARNL3-214ENST00000478696 COX6B1P14854 86 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms