RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FAM218AQ96MZ4 157 aa15.46■□□□□ 0.07
CCM2-211ENST00000478582 A0A1B0GX51 115 aa15.45■□□□□ 0.06
CCM2-211ENST00000478582 PSMB2P49721 201 aa15.43■□□□□ 0.06
CCM2-211ENST00000478582 PPDPFLQ8WWR9 84 aa15.42■□□□□ 0.06
CCM2-211ENST00000478582 SPINK1P00995 79 aa15.41■□□□□ 0.06
CCM2-211ENST00000478582 COX6CP09669 75 aa15.41■□□□□ 0.06
CCM2-211ENST00000478582 OCIAD2Q56VL3 154 aa15.4■□□□□ 0.06
CCM2-211ENST00000478582 RPS29P62273 56 aaKnown RBP15.36■□□□□ 0.05
CCM2-211ENST00000478582 CLEC2BQ92478 149 aa15.36■□□□□ 0.05
CCM2-211ENST00000478582 PRR4Q16378 134 aa15.34■□□□□ 0.05
CCM2-211ENST00000478582 LPAP08519 4548 aa15.33■□□□□ 0.04
CCM2-211ENST00000478582 F8WEM9 126 aa15.31■□□□□ 0.04
CCM2-211ENST00000478582 GHRHP01286 108 aa15.3■□□□□ 0.04
CCM2-211ENST00000478582 IGLV8-61A0A075B6I0 122 aa15.29■□□□□ 0.04
CCM2-211ENST00000478582 SNHG12Q9BXW3 62 aa15.29■□□□□ 0.04
CCM2-211ENST00000478582 SCGB1C2P0DMR2 95 aa15.28■□□□□ 0.04
CCM2-211ENST00000478582 CD164Q04900 197 aa15.28■□□□□ 0.04
CCM2-211ENST00000478582 DNAL4O96015 105 aa15.25■□□□□ 0.03
CCM2-211ENST00000478582 BATFQ16520 125 aa15.25■□□□□ 0.03
CCM2-211ENST00000478582 RETNLBQ9BQ08 111 aa15.24■□□□□ 0.03
CCM2-211ENST00000478582 TRACP01848 142 aa15.23■□□□□ 0.03
CCM2-211ENST00000478582 Q6JHZ5 121 aa15.23■□□□□ 0.03
CCM2-211ENST00000478582 H3BQ85 93 aa15.22■□□□□ 0.03
CCM2-211ENST00000478582 LST1O00453 97 aa15.22■□□□□ 0.03
CCM2-211ENST00000478582 ORMDL1Q9P0S3 153 aa15.21■□□□□ 0.03
CCM2-211ENST00000478582 NDUFV3P56181 108 aaKnown RBP15.2■□□□□ 0.02
CCM2-211ENST00000478582 HRCT1Q6UXD1 115 aa15.2■□□□□ 0.02
CCM2-211ENST00000478582 A0A0G2JQZ4 141 aa15.19■□□□□ 0.02
CCM2-211ENST00000478582 RNF213Q63HN8 5207 aa15.19■□□□□ 0.02
CCM2-211ENST00000478582 NAA38Q9BRA0 125 aaKnown RBP15.18■□□□□ 0.02
CCM2-211ENST00000478582 FABP2P12104 132 aa15.17■□□□□ 0.02
CCM2-211ENST00000478582 LIMD2Q9BT23 127 aa15.17■□□□□ 0.02
CCM2-211ENST00000478582 IGFL1Q6UW32 110 aa15.16■□□□□ 0.02
CCM2-211ENST00000478582 FP248Q71RG6 208 aaPredicted RBP15.16■□□□□ 0.02
CCM2-211ENST00000478582 TMEM256-PLSCR3K7ERE1 68 aa15.14■□□□□ 0.01
CCM2-211ENST00000478582 Q5XG85 94 aa15.14■□□□□ 0.01
CCM2-211ENST00000478582 H3BUT2 72 aa15.12■□□□□ 0.01
CCM2-211ENST00000478582 IGLV7-46A0A075B6I9 117 aa15.11■□□□□ 0.01
CCM2-211ENST00000478582 TCL1BO95988 128 aa15.11■□□□□ 0.01
CCM2-211ENST00000478582 H3BMG7 143 aa15.1■□□□□ 0.01
CCM2-211ENST00000478582 LYRM7Q5U5X0 104 aa15.1■□□□□ 0.01
CCM2-211ENST00000478582 C9orf118A6NHY6 69 aa15.09■□□□□ 0.01
CCM2-211ENST00000478582 TAX1BP3O14907 124 aa15.09■□□□□ 0.01
CCM2-211ENST00000478582 ATXN8Q156A1 80 aa15.09■□□□□ 0.01
CCM2-211ENST00000478582 UBE2V1Q13404 147 aa15.07■□□□□ 0
CCM2-211ENST00000478582 TRBV20-1A0A075B6N2 111 aa15.04■□□□□ -0
CCM2-211ENST00000478582 TPRXLQ17RH7 258 aa15.04■□□□□ -0
CCM2-211ENST00000478582 TRBV7-7A0A0K0K1E9 115 aa15.03■□□□□ -0
CCM2-211ENST00000478582 Q6Q795 121 aa15.03■□□□□ -0
CCM2-211ENST00000478582 BAALC-AS2P0C853 105 aa15.02■□□□□ -0
CCM2-211ENST00000478582 A0A1W2PPM0 123 aa14.98□□□□□ -0.01
CCM2-211ENST00000478582 TEN1Q86WV5 123 aa14.98□□□□□ -0.01
CCM2-211ENST00000478582 ASB16-AS1Q495Z4 193 aa14.96□□□□□ -0.01
CCM2-211ENST00000478582 COL5A1-AS1Q5SY13 56 aa14.96□□□□□ -0.01
CCM2-211ENST00000478582 ANKRD29Q8N6D5 301 aa14.96□□□□□ -0.01
CCM2-211ENST00000478582 C1orf195Q5TG92 126 aa14.95□□□□□ -0.02
CCM2-211ENST00000478582 PCP4L1A6NKN8 68 aa14.93□□□□□ -0.02
CCM2-211ENST00000478582 KRTAP13-3Q3SY46 172 aa14.93□□□□□ -0.02
CCM2-211ENST00000478582 A0A1W2PNM2 257 aa14.9□□□□□ -0.02
CCM2-211ENST00000478582 CDIP1Q9H305 208 aa14.9□□□□□ -0.02
CCM2-211ENST00000478582 A0A1B0GV72 72 aa14.89□□□□□ -0.03
CCM2-211ENST00000478582 RBM3P98179 157 aaKnown RBP14.89□□□□□ -0.03
CCM2-211ENST00000478582 TRBV7-4A0A0J9YYF1 115 aa14.87□□□□□ -0.03
CCM2-211ENST00000478582 C9JAW5 83 aa14.87□□□□□ -0.03
CCM2-211ENST00000478582 SS18L2Q9UHA2 77 aa14.86□□□□□ -0.03
CCM2-211ENST00000478582 DSCR8Q96T75 97 aa14.83□□□□□ -0.04
CCM2-211ENST00000478582 A0A087WSZ3 146 aa14.82□□□□□ -0.04
CCM2-211ENST00000478582 JMJD7-PLA2G4BH0Y9G9 81 aa14.82□□□□□ -0.04
CCM2-211ENST00000478582 SPCS1Q9Y6A9 102 aa14.81□□□□□ -0.04
CCM2-211ENST00000478582 CCKP06307 115 aa14.8□□□□□ -0.04
CCM2-211ENST00000478582 H3BT86 120 aa14.78□□□□□ -0.04
CCM2-211ENST00000478582 MUC2Q02817 5179 aa14.75□□□□□ -0.05
CCM2-211ENST00000478582 OBSCN-AS1Q96MR7 158 aa14.75□□□□□ -0.05
CCM2-211ENST00000478582 LOC110117498A0A087WWA1 95 aa14.71□□□□□ -0.05
CCM2-211ENST00000478582 PDE6GP18545 87 aa14.7□□□□□ -0.06
CCM2-211ENST00000478582 MUC17Q685J3 4493 aa14.69□□□□□ -0.06
CCM2-211ENST00000478582 A0A0U1RQV1 116 aa14.69□□□□□ -0.06
CCM2-211ENST00000478582 Q6ZQT0 140 aa14.69□□□□□ -0.06
CCM2-211ENST00000478582 MTURNQ8N3F0 131 aa14.69□□□□□ -0.06
CCM2-211ENST00000478582 Q96NJ1 140 aa14.69□□□□□ -0.06
CCM2-211ENST00000478582 VPS25Q9BRG1 176 aa14.68□□□□□ -0.06
CCM2-211ENST00000478582 K7EP34 96 aa14.67□□□□□ -0.06
CCM2-211ENST00000478582 C21orf62-AS1Q17RA5 79 aa14.67□□□□□ -0.06
CCM2-211ENST00000478582 XP32Q5T750 250 aa14.67□□□□□ -0.06
CCM2-211ENST00000478582 C9orf92A6NGG3 77 aa14.65□□□□□ -0.06
CCM2-211ENST00000478582 C14orf132Q9NPU4 83 aa14.65□□□□□ -0.06
CCM2-211ENST00000478582 A0A1B0GW54 56 aa14.63□□□□□ -0.07
CCM2-211ENST00000478582 SMCPP49901 116 aaPredicted RBP14.6□□□□□ -0.07
CCM2-211ENST00000478582 LINC00472Q9H8W2 130 aa14.59□□□□□ -0.07
CCM2-211ENST00000478582 PRO0461Q9UI25 63 aa14.59□□□□□ -0.07
CCM2-211ENST00000478582 GTF2H5Q6ZYL4 71 aa14.58□□□□□ -0.08
CCM2-211ENST00000478582 SEC61BP60468 96 aaKnown RBP14.53□□□□□ -0.08
CCM2-211ENST00000478582 IGKV4-1P06312 121 aa14.52□□□□□ -0.09
CCM2-211ENST00000478582 SIGMAR1Q99720 223 aa14.49□□□□□ -0.09
CCM2-211ENST00000478582 DEFB116Q30KQ4 102 aa14.48□□□□□ -0.09
CCM2-211ENST00000478582 F8W1H4 67 aa14.44□□□□□ -0.1
CCM2-211ENST00000478582 J3KT08 172 aa14.42□□□□□ -0.1
CCM2-211ENST00000478582 RPL37P61927 97 aaKnown RBP14.42□□□□□ -0.1
CCM2-211ENST00000478582 FAT4Q6V0I7 4981 aa14.42□□□□□ -0.1
CCM2-211ENST00000478582 LCE2AQ5TA79 106 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms