RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 J3KT08 172 aa4.04□□□□□ -1.76
BRCA1-215ENST00000478531 A0A1B0GWB2 263 aa4.03□□□□□ -1.76
BRCA1-215ENST00000478531 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
BRCA1-215ENST00000478531 LINC00483Q53H64 154 aa4.03□□□□□ -1.76
BRCA1-215ENST00000478531 LINC00304Q8N9R0 145 aa4.03□□□□□ -1.76
BRCA1-215ENST00000478531 RAB37Q96AX2 223 aa4.03□□□□□ -1.76
BRCA1-215ENST00000478531 TRBV7-6A0A0J9YX20 115 aa4.03□□□□□ -1.76
BRCA1-215ENST00000478531 CEND1Q8N111 149 aa4.03□□□□□ -1.76
BRCA1-215ENST00000478531 CFC1BP0CG36 223 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 CFC1P0CG37 223 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 MOBPQ13875 183 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 C9orf153Q5TBE3 101 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 DEFB105AQ8NG35 78 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 LPAP08519 4548 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 FXYD2P54710 66 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 Q8NBF4 154 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 UQCR10Q9UDW1 63 aa4.02□□□□□ -1.77
BRCA1-215ENST00000478531 SLC25A20O43772 301 aa4.01□□□□□ -1.77
BRCA1-215ENST00000478531 HSD52Q0P140 79 aa4.01□□□□□ -1.77
BRCA1-215ENST00000478531 Q1RN00 199 aa4.01□□□□□ -1.77
BRCA1-215ENST00000478531 A0A0B4J2C4 111 aa4□□□□□ -1.77
BRCA1-215ENST00000478531 FAM236DA0A1B0GTK5 79 aa4□□□□□ -1.77
BRCA1-215ENST00000478531 FAM236CP0DP71 79 aa4□□□□□ -1.77
BRCA1-215ENST00000478531 NHP2Q9NX24 153 aaKnown RBP4□□□□□ -1.77
BRCA1-215ENST00000478531 TRIAP1O43715 76 aa4□□□□□ -1.77
BRCA1-215ENST00000478531 PRR4Q16378 134 aa4□□□□□ -1.77
BRCA1-215ENST00000478531 BVES-AS1Q5T3Y7 98 aa3.99□□□□□ -1.77
BRCA1-215ENST00000478531 RETNLBQ9BQ08 111 aa3.99□□□□□ -1.77
BRCA1-215ENST00000478531 TEX49A0A1B0GTD5 131 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 hADV29S1A0JD25 119 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 C9JAW5 83 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 K7ERJ3 54 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 LINC00575Q6W349 94 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 LAMTOR3Q9UHA4 124 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 SPRR1BP22528 89 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 XP32Q5T750 250 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 Q6ZQY7 126 aa3.98□□□□□ -1.77
BRCA1-215ENST00000478531 LINC01547P58512 204 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-215ENST00000478531 SPAG11AQ6PDA7 123 aa3.97□□□□□ -1.77
BRCA1-215ENST00000478531 SSBP3-AS1Q7Z2R9 100 aa3.97□□□□□ -1.77
BRCA1-215ENST00000478531 IGLV5-48A0A075B6I7 105 aa3.96□□□□□ -1.77
BRCA1-215ENST00000478531 PMAIP1Q13794 54 aa3.96□□□□□ -1.77
BRCA1-215ENST00000478531 Q75L30 129 aa3.96□□□□□ -1.77
BRCA1-215ENST00000478531 HRCT1Q6UXD1 115 aa3.96□□□□□ -1.78
BRCA1-215ENST00000478531 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
BRCA1-215ENST00000478531 Q8N377 158 aa3.96□□□□□ -1.78
BRCA1-215ENST00000478531 SPINK1P00995 79 aa3.95□□□□□ -1.78
BRCA1-215ENST00000478531 PSMB2P49721 201 aa3.95□□□□□ -1.78
BRCA1-215ENST00000478531 SMIM29Q86T20 159 aa3.95□□□□□ -1.78
BRCA1-215ENST00000478531 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
BRCA1-215ENST00000478531 F8WEM9 126 aa3.94□□□□□ -1.78
BRCA1-215ENST00000478531 A0A0G2JQZ4 141 aa3.94□□□□□ -1.78
BRCA1-215ENST00000478531 H0YGX0 51 aa3.94□□□□□ -1.78
BRCA1-215ENST00000478531 SNCGO76070 127 aa3.94□□□□□ -1.78
BRCA1-215ENST00000478531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-215ENST00000478531 CLEC2BQ92478 149 aa3.94□□□□□ -1.78
BRCA1-215ENST00000478531 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
BRCA1-215ENST00000478531 A0A0U1RQV1 116 aa3.93□□□□□ -1.78
BRCA1-215ENST00000478531 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
BRCA1-215ENST00000478531 J3QR89 54 aa3.92□□□□□ -1.78
BRCA1-215ENST00000478531 BATFQ16520 125 aa3.92□□□□□ -1.78
BRCA1-215ENST00000478531 Q5XG85 94 aa3.92□□□□□ -1.78
BRCA1-215ENST00000478531 IGLV7-46A0A075B6I9 117 aa3.91□□□□□ -1.78
BRCA1-215ENST00000478531 DNAL4O96015 105 aa3.91□□□□□ -1.78
BRCA1-215ENST00000478531 COX6CP09669 75 aa3.91□□□□□ -1.78
BRCA1-215ENST00000478531 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
BRCA1-215ENST00000478531 PPDPFLQ8WWR9 84 aa3.91□□□□□ -1.78
BRCA1-215ENST00000478531 LIMD2Q9BT23 127 aa3.91□□□□□ -1.78
BRCA1-215ENST00000478531 H3BUT2 72 aa3.9□□□□□ -1.79
BRCA1-215ENST00000478531 SCGB1C2P0DMR2 95 aa3.9□□□□□ -1.79
BRCA1-215ENST00000478531 CCDC179H3BU77 68 aa3.89□□□□□ -1.79
BRCA1-215ENST00000478531 FABP2P12104 132 aa3.89□□□□□ -1.79
BRCA1-215ENST00000478531 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-215ENST00000478531 Q6JHZ5 121 aa3.89□□□□□ -1.79
BRCA1-215ENST00000478531 IGFL1Q6UW32 110 aa3.89□□□□□ -1.79
BRCA1-215ENST00000478531 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
BRCA1-215ENST00000478531 ORMDL1Q9P0S3 153 aa3.88□□□□□ -1.79
BRCA1-215ENST00000478531 IGLV8-61A0A075B6I0 122 aa3.87□□□□□ -1.79
BRCA1-215ENST00000478531 C8orf87E5RJ46 101 aa3.87□□□□□ -1.79
BRCA1-215ENST00000478531 NDUFV3P56181 108 aaKnown RBP3.87□□□□□ -1.79
BRCA1-215ENST00000478531 MUC2Q02817 5179 aa3.87□□□□□ -1.79
BRCA1-215ENST00000478531 H3BMG7 143 aa3.86□□□□□ -1.79
BRCA1-215ENST00000478531 LST1O00453 97 aa3.86□□□□□ -1.79
BRCA1-215ENST00000478531 TRACP01848 142 aa3.85□□□□□ -1.79
BRCA1-215ENST00000478531 TRBV7-7A0A0K0K1E9 115 aa3.85□□□□□ -1.79
BRCA1-215ENST00000478531 TCL1BO95988 128 aa3.85□□□□□ -1.79
BRCA1-215ENST00000478531 KRTAP13-3Q3SY46 172 aa3.85□□□□□ -1.79
BRCA1-215ENST00000478531 Q6ZVQ6 151 aa3.85□□□□□ -1.79
BRCA1-215ENST00000478531 TMEM256-PLSCR3K7ERE1 68 aa3.84□□□□□ -1.79
BRCA1-215ENST00000478531 H3BQ85 93 aa3.83□□□□□ -1.8
BRCA1-215ENST00000478531 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
BRCA1-215ENST00000478531 LYRM7Q5U5X0 104 aa3.83□□□□□ -1.8
BRCA1-215ENST00000478531 ANKRD29Q8N6D5 301 aa3.83□□□□□ -1.8
BRCA1-215ENST00000478531 RBM12B-AS1Q9P1G2 102 aa3.83□□□□□ -1.8
BRCA1-215ENST00000478531 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
BRCA1-215ENST00000478531 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms