RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 Q8NBF4 154 aa5.96□□□□□ -1.46
HDAC6-222ENST00000478095 UQCR10Q9UDW1 63 aa5.96□□□□□ -1.46
HDAC6-222ENST00000478095 A0A0B4J2C4 111 aa5.95□□□□□ -1.46
HDAC6-222ENST00000478095 HSD52Q0P140 79 aa5.95□□□□□ -1.46
HDAC6-222ENST00000478095 VAMP3Q15836 100 aa5.95□□□□□ -1.46
HDAC6-222ENST00000478095 C9orf153Q5TBE3 101 aa5.95□□□□□ -1.46
HDAC6-222ENST00000478095 PRO1933Q9H354 126 aa5.94□□□□□ -1.46
HDAC6-222ENST00000478095 SPRR1BP22528 89 aa5.93□□□□□ -1.46
HDAC6-222ENST00000478095 PRR4Q16378 134 aa5.93□□□□□ -1.46
HDAC6-222ENST00000478095 Q1RN00 199 aa5.93□□□□□ -1.46
HDAC6-222ENST00000478095 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
HDAC6-222ENST00000478095 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
HDAC6-222ENST00000478095 NHP2Q9NX24 153 aaKnown RBP5.93□□□□□ -1.46
HDAC6-222ENST00000478095 K7ERJ3 54 aa5.92□□□□□ -1.46
HDAC6-222ENST00000478095 SLC25A20O43772 301 aa5.92□□□□□ -1.46
HDAC6-222ENST00000478095 SMIM6P0DI80 62 aa5.92□□□□□ -1.46
HDAC6-222ENST00000478095 LINC01547P58512 204 aaPredicted RBP5.92□□□□□ -1.46
HDAC6-222ENST00000478095 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
HDAC6-222ENST00000478095 TEX49A0A1B0GTD5 131 aa5.91□□□□□ -1.46
HDAC6-222ENST00000478095 hADV29S1A0JD25 119 aa5.91□□□□□ -1.46
HDAC6-222ENST00000478095 LRP2P98164 4655 aa5.91□□□□□ -1.46
HDAC6-222ENST00000478095 BVES-AS1Q5T3Y7 98 aa5.91□□□□□ -1.46
HDAC6-222ENST00000478095 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
HDAC6-222ENST00000478095 PRO1854Q9UHT4 67 aa5.91□□□□□ -1.46
HDAC6-222ENST00000478095 IGLV5-48A0A075B6I7 105 aa5.9□□□□□ -1.46
HDAC6-222ENST00000478095 LOC105371267A0A1B0GV96 52 aa5.9□□□□□ -1.46
HDAC6-222ENST00000478095 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.46
HDAC6-222ENST00000478095 Q6ZQY7 126 aa5.9□□□□□ -1.46
HDAC6-222ENST00000478095 SSBP3-AS1Q7Z2R9 100 aa5.9□□□□□ -1.46
HDAC6-222ENST00000478095 SMIM29Q86T20 159 aa5.89□□□□□ -1.47
HDAC6-222ENST00000478095 Q8N377 158 aa5.89□□□□□ -1.47
HDAC6-222ENST00000478095 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
HDAC6-222ENST00000478095 FAM218AQ96MZ4 157 aa5.88□□□□□ -1.47
HDAC6-222ENST00000478095 TRIAP1O43715 76 aa5.87□□□□□ -1.47
HDAC6-222ENST00000478095 SPINK1P00995 79 aa5.87□□□□□ -1.47
HDAC6-222ENST00000478095 HRCT1Q6UXD1 115 aa5.87□□□□□ -1.47
HDAC6-222ENST00000478095 CTAG1AP78358 180 aa5.86□□□□□ -1.47
HDAC6-222ENST00000478095 LPAP08519 4548 aa5.86□□□□□ -1.47
HDAC6-222ENST00000478095 A0A0G2JQZ4 141 aa5.85□□□□□ -1.47
HDAC6-222ENST00000478095 H0YGX0 51 aa5.85□□□□□ -1.47
HDAC6-222ENST00000478095 PSMB2P49721 201 aa5.85□□□□□ -1.47
HDAC6-222ENST00000478095 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-222ENST00000478095 CLEC2BQ92478 149 aa5.84□□□□□ -1.47
HDAC6-222ENST00000478095 F8WEM9 126 aa5.83□□□□□ -1.48
HDAC6-222ENST00000478095 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
HDAC6-222ENST00000478095 TSTD3H0UI37 97 aa5.82□□□□□ -1.48
HDAC6-222ENST00000478095 SNCGO76070 127 aa5.82□□□□□ -1.48
HDAC6-222ENST00000478095 RPS29P62273 56 aaKnown RBP5.82□□□□□ -1.48
HDAC6-222ENST00000478095 M0R143 59 aa5.81□□□□□ -1.48
HDAC6-222ENST00000478095 SNHG12Q9BXW3 62 aa5.81□□□□□ -1.48
HDAC6-222ENST00000478095 A0A1B0GX51 115 aa5.79□□□□□ -1.48
HDAC6-222ENST00000478095 H3BUT2 72 aa5.79□□□□□ -1.48
HDAC6-222ENST00000478095 COX6CP09669 75 aa5.79□□□□□ -1.48
HDAC6-222ENST00000478095 PPDPFLQ8WWR9 84 aa5.79□□□□□ -1.48
HDAC6-222ENST00000478095 DNAL4O96015 105 aa5.78□□□□□ -1.48
HDAC6-222ENST00000478095 FABP2P12104 132 aa5.78□□□□□ -1.48
HDAC6-222ENST00000478095 CD164Q04900 197 aa5.78□□□□□ -1.48
HDAC6-222ENST00000478095 BATFQ16520 125 aa5.78□□□□□ -1.48
HDAC6-222ENST00000478095 OCIAD2Q56VL3 154 aa5.78□□□□□ -1.48
HDAC6-222ENST00000478095 FP248Q71RG6 208 aaPredicted RBP5.78□□□□□ -1.48
HDAC6-222ENST00000478095 NAA38Q9BRA0 125 aaKnown RBP5.78□□□□□ -1.48
HDAC6-222ENST00000478095 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
HDAC6-222ENST00000478095 IGLV8-61A0A075B6I0 122 aa5.77□□□□□ -1.49
HDAC6-222ENST00000478095 SCGB1C2P0DMR2 95 aa5.77□□□□□ -1.49
HDAC6-222ENST00000478095 IGFL1Q6UW32 110 aa5.77□□□□□ -1.49
HDAC6-222ENST00000478095 NDUFV3P56181 108 aaKnown RBP5.76□□□□□ -1.49
HDAC6-222ENST00000478095 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
HDAC6-222ENST00000478095 Q6JHZ5 121 aa5.76□□□□□ -1.49
HDAC6-222ENST00000478095 A0A1B0GV72 72 aa5.75□□□□□ -1.49
HDAC6-222ENST00000478095 ORMDL1Q9P0S3 153 aa5.75□□□□□ -1.49
HDAC6-222ENST00000478095 H3BMG7 143 aa5.73□□□□□ -1.49
HDAC6-222ENST00000478095 LST1O00453 97 aa5.73□□□□□ -1.49
HDAC6-222ENST00000478095 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
HDAC6-222ENST00000478095 TRBV7-7A0A0K0K1E9 115 aa5.72□□□□□ -1.49
HDAC6-222ENST00000478095 TRACP01848 142 aa5.72□□□□□ -1.49
HDAC6-222ENST00000478095 Q5XG85 94 aa5.72□□□□□ -1.49
HDAC6-222ENST00000478095 RNF213Q63HN8 5207 aa5.72□□□□□ -1.49
HDAC6-222ENST00000478095 C1orf195Q5TG92 126 aa5.71□□□□□ -1.5
HDAC6-222ENST00000478095 TMEM256-PLSCR3K7ERE1 68 aa5.7□□□□□ -1.5
HDAC6-222ENST00000478095 TCL1BO95988 128 aa5.7□□□□□ -1.5
HDAC6-222ENST00000478095 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
HDAC6-222ENST00000478095 H3BQ85 93 aa5.68□□□□□ -1.5
HDAC6-222ENST00000478095 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
HDAC6-222ENST00000478095 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
HDAC6-222ENST00000478095 A0A087WSZ3 146 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 TAX1BP3O14907 124 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 BAALC-AS2P0C853 105 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 UBE2V1Q13404 147 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 Q6Q795 121 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 TEN1Q86WV5 123 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 ANKRD29Q8N6D5 301 aa5.66□□□□□ -1.5
HDAC6-222ENST00000478095 LYRM7Q5U5X0 104 aa5.65□□□□□ -1.5
HDAC6-222ENST00000478095 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
HDAC6-222ENST00000478095 SS18L2Q9UHA2 77 aa5.63□□□□□ -1.51
HDAC6-222ENST00000478095 TRBV20-1A0A075B6N2 111 aa5.62□□□□□ -1.51
HDAC6-222ENST00000478095 A0A1W2PPM0 123 aa5.62□□□□□ -1.51
HDAC6-222ENST00000478095 PCP4L1A6NKN8 68 aa5.62□□□□□ -1.51
HDAC6-222ENST00000478095 C9JAW5 83 aa5.62□□□□□ -1.51
HDAC6-222ENST00000478095 CCKP06307 115 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms