RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 FAM168BA1KXE4 195 aa8.61□□□□□ -1.03
HLA-DMA-208ENST00000477541 KRTAP7-1Q8IUC3 87 aa8.61□□□□□ -1.03
HLA-DMA-208ENST00000477541 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
HLA-DMA-208ENST00000477541 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
HLA-DMA-208ENST00000477541 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
HLA-DMA-208ENST00000477541 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
HLA-DMA-208ENST00000477541 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
HLA-DMA-208ENST00000477541 PRR15Q8IV56 129 aa8.57□□□□□ -1.04
HLA-DMA-208ENST00000477541 C1orf195Q5TG92 126 aa8.57□□□□□ -1.04
HLA-DMA-208ENST00000477541 OXLD1Q5BKU9 147 aa8.56□□□□□ -1.04
HLA-DMA-208ENST00000477541 TRAV22A0A0B4J277 110 aa8.55□□□□□ -1.04
HLA-DMA-208ENST00000477541 H0Y9J4 135 aa8.54□□□□□ -1.04
HLA-DMA-208ENST00000477541 SPRR1BP22528 89 aa8.54□□□□□ -1.04
HLA-DMA-208ENST00000477541 BIRC6Q9NR09 4857 aa8.54□□□□□ -1.04
HLA-DMA-208ENST00000477541 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
HLA-DMA-208ENST00000477541 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMA-208ENST00000477541 C16orf90A8MZG2 172 aa8.54□□□□□ -1.04
HLA-DMA-208ENST00000477541 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
HLA-DMA-208ENST00000477541 TENM3Q9P273 2699 aa8.53□□□□□ -1.04
HLA-DMA-208ENST00000477541 CASC10Q5T4H9 136 aa8.51□□□□□ -1.05
HLA-DMA-208ENST00000477541 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
HLA-DMA-208ENST00000477541 A0A087WSZ3 146 aa8.51□□□□□ -1.05
HLA-DMA-208ENST00000477541 B9D2Q9BPU9 175 aa8.5□□□□□ -1.05
HLA-DMA-208ENST00000477541 UBE2AP49459 152 aa8.49□□□□□ -1.05
HLA-DMA-208ENST00000477541 A8MWP4 228 aa8.49□□□□□ -1.05
HLA-DMA-208ENST00000477541 WFDC13Q8IUB5 93 aa8.49□□□□□ -1.05
HLA-DMA-208ENST00000477541 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
HLA-DMA-208ENST00000477541 C14orf177Q52M58 125 aa8.48□□□□□ -1.05
HLA-DMA-208ENST00000477541 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
HLA-DMA-208ENST00000477541 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
HLA-DMA-208ENST00000477541 H0Y9P7 68 aa8.46□□□□□ -1.05
HLA-DMA-208ENST00000477541 LINC00208Q96KT6 92 aa8.46□□□□□ -1.05
HLA-DMA-208ENST00000477541 A0A096LNI7 61 aa8.46□□□□□ -1.06
HLA-DMA-208ENST00000477541 LIMD2Q9BT23 127 aa8.46□□□□□ -1.06
HLA-DMA-208ENST00000477541 PRLHP81277 87 aa8.45□□□□□ -1.06
HLA-DMA-208ENST00000477541 LINC00472Q9H8W2 130 aa8.45□□□□□ -1.06
HLA-DMA-208ENST00000477541 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
HLA-DMA-208ENST00000477541 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
HLA-DMA-208ENST00000477541 DNAH3Q8TD57 4116 aa8.41□□□□□ -1.06
HLA-DMA-208ENST00000477541 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
HLA-DMA-208ENST00000477541 COL7A1Q02388 2944 aa8.41□□□□□ -1.06
HLA-DMA-208ENST00000477541 DEFB116Q30KQ4 102 aa8.4□□□□□ -1.07
HLA-DMA-208ENST00000477541 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.07
HLA-DMA-208ENST00000477541 PSPHP1O15172 72 aa8.39□□□□□ -1.07
HLA-DMA-208ENST00000477541 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
HLA-DMA-208ENST00000477541 DNAH1Q9P2D7 4330 aa8.39□□□□□ -1.07
HLA-DMA-208ENST00000477541 PRR4Q16378 134 aa8.38□□□□□ -1.07
HLA-DMA-208ENST00000477541 RYR2Q92736 4967 aa8.38□□□□□ -1.07
HLA-DMA-208ENST00000477541 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
HLA-DMA-208ENST00000477541 A0A0G2JQZ4 141 aa8.37□□□□□ -1.07
HLA-DMA-208ENST00000477541 PRB2P02812 416 aaPredicted RBP8.37□□□□□ -1.07
HLA-DMA-208ENST00000477541 PMAIP1Q13794 54 aa8.37□□□□□ -1.07
HLA-DMA-208ENST00000477541 MOBPQ13875 183 aa8.37□□□□□ -1.07
HLA-DMA-208ENST00000477541 Q8N9P0 234 aaPredicted RBP8.37□□□□□ -1.07
HLA-DMA-208ENST00000477541 DYNC2H1Q8NCM8 4307 aaKnown RBP8.36□□□□□ -1.07
HLA-DMA-208ENST00000477541 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
HLA-DMA-208ENST00000477541 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
HLA-DMA-208ENST00000477541 A8MUN3 132 aa8.36□□□□□ -1.07
HLA-DMA-208ENST00000477541 Q5VV11 94 aa8.36□□□□□ -1.07
HLA-DMA-208ENST00000477541 WWC2-AS2Q96NR7 200 aa8.36□□□□□ -1.07
HLA-DMA-208ENST00000477541 ASB16-AS1Q495Z4 193 aa8.34□□□□□ -1.07
HLA-DMA-208ENST00000477541 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
HLA-DMA-208ENST00000477541 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
HLA-DMA-208ENST00000477541 Q75L30 129 aa8.32□□□□□ -1.08
HLA-DMA-208ENST00000477541 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
HLA-DMA-208ENST00000477541 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
HLA-DMA-208ENST00000477541 Q6ZR54 194 aa8.3□□□□□ -1.08
HLA-DMA-208ENST00000477541 KRTAP1-5Q9BYS1 174 aa8.3□□□□□ -1.08
HLA-DMA-208ENST00000477541 SEC61GP60059 68 aa8.29□□□□□ -1.08
HLA-DMA-208ENST00000477541 COA5Q86WW8 74 aa8.29□□□□□ -1.08
HLA-DMA-208ENST00000477541 SACSQ9NZJ4 4579 aa8.28□□□□□ -1.08
HLA-DMA-208ENST00000477541 CHKB-CPT1BH3BT56 60 aa8.27□□□□□ -1.09
HLA-DMA-208ENST00000477541 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
HLA-DMA-208ENST00000477541 UBE2DNLQ8IWF7 75 aa8.27□□□□□ -1.09
HLA-DMA-208ENST00000477541 LINC00483Q53H64 154 aa8.26□□□□□ -1.09
HLA-DMA-208ENST00000477541 PRR15LQ9BU68 103 aa8.26□□□□□ -1.09
HLA-DMA-208ENST00000477541 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
HLA-DMA-208ENST00000477541 TENM2Q9NT68 2774 aa8.26□□□□□ -1.09
HLA-DMA-208ENST00000477541 Q96NJ1 140 aa8.26□□□□□ -1.09
HLA-DMA-208ENST00000477541 K7EIL1 84 aa8.25□□□□□ -1.09
HLA-DMA-208ENST00000477541 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
HLA-DMA-208ENST00000477541 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
HLA-DMA-208ENST00000477541 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
HLA-DMA-208ENST00000477541 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
HLA-DMA-208ENST00000477541 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
HLA-DMA-208ENST00000477541 LYSTQ99698 3801 aa8.22□□□□□ -1.09
HLA-DMA-208ENST00000477541 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
HLA-DMA-208ENST00000477541 A0A1B0GVX0 72 aa8.21□□□□□ -1.09
HLA-DMA-208ENST00000477541 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
HLA-DMA-208ENST00000477541 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
HLA-DMA-208ENST00000477541 DNAH7Q8WXX0 4024 aa8.19□□□□□ -1.1
HLA-DMA-208ENST00000477541 CD164Q04900 197 aa8.19□□□□□ -1.1
HLA-DMA-208ENST00000477541 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
HLA-DMA-208ENST00000477541 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
HLA-DMA-208ENST00000477541 A6NED7 52 aa8.17□□□□□ -1.1
HLA-DMA-208ENST00000477541 NDUFS5O43920 106 aa8.17□□□□□ -1.1
HLA-DMA-208ENST00000477541 SPACA4Q8TDM5 124 aa8.17□□□□□ -1.1
HLA-DMA-208ENST00000477541 STAB2Q8WWQ8 2551 aa8.16□□□□□ -1.1
HLA-DMA-208ENST00000477541 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
HLA-DMA-208ENST00000477541 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms