RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 DSPP15924 2871 aaKnown RBP0.26□□□□□ -2.37
RPGR-207ENST00000476559 SMIM31A0A1B0GVY4 71 aa0.26□□□□□ -2.37
RPGR-207ENST00000476559 ITSN2Q9NZM3 1697 aa0.26□□□□□ -2.37
RPGR-207ENST00000476559 TOGARAM1Q9Y4F4 1720 aa0.26□□□□□ -2.37
RPGR-207ENST00000476559 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
RPGR-207ENST00000476559 HFM1A2PYH4 1435 aa0.25□□□□□ -2.37
RPGR-207ENST00000476559 HECTD4Q9Y4D8 3996 aa0.25□□□□□ -2.37
RPGR-207ENST00000476559 C3orf79P0CE67 100 aa0.25□□□□□ -2.37
RPGR-207ENST00000476559 ATXN8Q156A1 80 aa0.25□□□□□ -2.37
RPGR-207ENST00000476559 CACNA1AO00555 2505 aa0.25□□□□□ -2.37
RPGR-207ENST00000476559 SPINK4O60575 86 aa0.24□□□□□ -2.37
RPGR-207ENST00000476559 PRO3102Q9H379 93 aa0.24□□□□□ -2.37
RPGR-207ENST00000476559 MAP1BP46821 2468 aaKnown RBP0.24□□□□□ -2.37
RPGR-207ENST00000476559 PTPN13Q12923 2485 aa0.23□□□□□ -2.37
RPGR-207ENST00000476559 A0A087WWC5 75 aa0.23□□□□□ -2.37
RPGR-207ENST00000476559 THOC2Q8NI27 1593 aaKnown RBP0.23□□□□□ -2.37
RPGR-207ENST00000476559 NBASA2RRP1 2371 aa0.23□□□□□ -2.37
RPGR-207ENST00000476559 HSPG2P98160 4391 aa0.22□□□□□ -2.37
RPGR-207ENST00000476559 TNRC18O15417 2968 aaPredicted RBP0.22□□□□□ -2.37
RPGR-207ENST00000476559 AKAP13Q12802 2813 aa0.22□□□□□ -2.37
RPGR-207ENST00000476559 CROCC2H7BZ55 1655 aa0.22□□□□□ -2.37
RPGR-207ENST00000476559 DEFB131BA0A096LNP1 70 aa0.22□□□□□ -2.37
RPGR-207ENST00000476559 CRIP1P50238 77 aa0.22□□□□□ -2.37
RPGR-207ENST00000476559 LRP1BQ9NZR2 4599 aa0.22□□□□□ -2.37
RPGR-207ENST00000476559 PRRC2CQ9Y520 2896 aaKnown RBP0.21□□□□□ -2.38
RPGR-207ENST00000476559 PKD1P98161 4303 aa0.21□□□□□ -2.38
RPGR-207ENST00000476559 PREX2Q70Z35 1606 aa0.21□□□□□ -2.38
RPGR-207ENST00000476559 LOC730098B7Z3J9 87 aa0.21□□□□□ -2.38
RPGR-207ENST00000476559 LINC00158P58513 81 aa0.21□□□□□ -2.38
RPGR-207ENST00000476559 GNG13Q9P2W3 67 aa0.21□□□□□ -2.38
RPGR-207ENST00000476559 ANKRD36CQ5JPF3 1778 aa0.21□□□□□ -2.38
RPGR-207ENST00000476559 DCHS2Q6V1P9 2916 aa0.2□□□□□ -2.38
RPGR-207ENST00000476559 LINC01549A6NIU2 74 aa0.2□□□□□ -2.38
RPGR-207ENST00000476559 SPRR2DP22532 72 aa0.2□□□□□ -2.38
RPGR-207ENST00000476559 APC2O95996 2303 aa0.2□□□□□ -2.38
RPGR-207ENST00000476559 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
RPGR-207ENST00000476559 ACANP16112 2415 aa0.19□□□□□ -2.38
RPGR-207ENST00000476559 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
RPGR-207ENST00000476559 VPS13BQ7Z7G8 4022 aa0.19□□□□□ -2.38
RPGR-207ENST00000476559 LYNX1G3V0Z9 82 aa0.19□□□□□ -2.38
RPGR-207ENST00000476559 UBL5Q9BZL1 73 aa0.19□□□□□ -2.38
RPGR-207ENST00000476559 MAST1Q9Y2H9 1570 aa0.19□□□□□ -2.38
RPGR-207ENST00000476559 KIAA0586Q9BVV6 1533 aa0.18□□□□□ -2.38
RPGR-207ENST00000476559 COL7A1Q02388 2944 aa0.18□□□□□ -2.38
RPGR-207ENST00000476559 CDC42BPAQ5VT25 1732 aa0.18□□□□□ -2.38
RPGR-207ENST00000476559 ABCA10Q8WWZ4 1543 aa0.18□□□□□ -2.38
RPGR-207ENST00000476559 ETDCA0A1B0GVM5 59 aa0.17□□□□□ -2.38
RPGR-207ENST00000476559 M0R2T5 61 aa0.17□□□□□ -2.38
RPGR-207ENST00000476559 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
RPGR-207ENST00000476559 UGGT1Q9NYU2 1555 aa0.16□□□□□ -2.38
RPGR-207ENST00000476559 DEFB114Q30KQ6 69 aa0.16□□□□□ -2.38
RPGR-207ENST00000476559 PRXQ9BXM0 1461 aa0.16□□□□□ -2.38
RPGR-207ENST00000476559 K7EMI3 77 aa0.15□□□□□ -2.39
RPGR-207ENST00000476559 SFTA3P0C7M3 94 aa0.15□□□□□ -2.39
RPGR-207ENST00000476559 DEFB130BP0DP73 79 aa0.15□□□□□ -2.39
RPGR-207ENST00000476559 DEFB130AP0DP74 79 aa0.15□□□□□ -2.39
RPGR-207ENST00000476559 PCNX1Q96RV3 2341 aa0.14□□□□□ -2.39
RPGR-207ENST00000476559 DMBT1Q9UGM3 2413 aaPredicted RBP0.14□□□□□ -2.39
RPGR-207ENST00000476559 IAPPP10997 89 aa0.14□□□□□ -2.39
RPGR-207ENST00000476559 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
RPGR-207ENST00000476559 PKHD1P08F94 4074 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 LRP2P98164 4655 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 ZZEF1O43149 2961 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 COL6A3P12111 3177 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 HECTD1Q9ULT8 2610 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 PDZD2O15018 2839 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 DEFB135Q30KP9 77 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 S100ZQ8WXG8 99 aa0.13□□□□□ -2.39
RPGR-207ENST00000476559 FLNBO75369 2602 aaKnown RBP0.12□□□□□ -2.39
RPGR-207ENST00000476559 CEP290O15078 2479 aa0.11□□□□□ -2.39
RPGR-207ENST00000476559 MRPL33O75394 65 aaKnown RBP0.11□□□□□ -2.39
RPGR-207ENST00000476559 NCBP2-AS2Q69YL0 99 aa0.11□□□□□ -2.39
RPGR-207ENST00000476559 CUBNO60494 3623 aa0.11□□□□□ -2.39
RPGR-207ENST00000476559 CLASP1Q7Z460 1538 aa0.11□□□□□ -2.39
RPGR-207ENST00000476559 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
RPGR-207ENST00000476559 SACSQ9NZJ4 4579 aa0.11□□□□□ -2.39
RPGR-207ENST00000476559 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
RPGR-207ENST00000476559 FLNCQ14315 2725 aa0.1□□□□□ -2.39
RPGR-207ENST00000476559 SYCP2Q9BX26 1530 aa0.1□□□□□ -2.39
RPGR-207ENST00000476559 SPRR2BP35325 72 aa0.1□□□□□ -2.39
RPGR-207ENST00000476559 PKHD1L1Q86WI1 4243 aa0.1□□□□□ -2.39
RPGR-207ENST00000476559 NRXN3Q9Y4C0 1643 aa0.09□□□□□ -2.39
RPGR-207ENST00000476559 FLGP20930 4061 aaPredicted RBP0.09□□□□□ -2.39
RPGR-207ENST00000476559 CPS1P31327 1500 aa0.09□□□□□ -2.39
RPGR-207ENST00000476559 RPS27P42677 84 aaKnown RBP0.09□□□□□ -2.4
RPGR-207ENST00000476559 RPS27LQ71UM5 84 aaKnown RBP0.09□□□□□ -2.4
RPGR-207ENST00000476559 DNAH9Q9NYC9 4486 aa0.09□□□□□ -2.4
RPGR-207ENST00000476559 CREBBPQ92793 2442 aa0.08□□□□□ -2.4
RPGR-207ENST00000476559 DNAH3Q8TD57 4116 aa0.08□□□□□ -2.4
RPGR-207ENST00000476559 MAP1AP78559 2803 aaPredicted RBP0.08□□□□□ -2.4
RPGR-207ENST00000476559 AGLP35573 1532 aa0.08□□□□□ -2.4
RPGR-207ENST00000476559 NF1P21359 2839 aa0.07□□□□□ -2.4
RPGR-207ENST00000476559 A0A1B0GUL6 1792 aa0.07□□□□□ -2.4
RPGR-207ENST00000476559 M0R1W7 72 aa0.07□□□□□ -2.4
RPGR-207ENST00000476559 ANK3Q12955 4377 aaKnown RBP0.06□□□□□ -2.4
RPGR-207ENST00000476559 FAT3Q8TDW7 4589 aa0.06□□□□□ -2.4
RPGR-207ENST00000476559 APOBP04114 4563 aaKnown RBP0.06□□□□□ -2.4
RPGR-207ENST00000476559 IGIPA6NJ69 53 aa0.06□□□□□ -2.4
RPGR-207ENST00000476559 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
RPGR-207ENST00000476559 LMO7Q8WWI1 1683 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms