RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 PKDREJQ9NTG1 2253 aa1.57□□□□□ -2.16
NUP58-209ENST00000476553 DEFB109BQ30KR1 87 aa1.57□□□□□ -2.16
NUP58-209ENST00000476553 WNK2Q9Y3S1 2297 aa1.57□□□□□ -2.16
NUP58-209ENST00000476553 GVINP1Q7Z2Y8 2422 aa1.57□□□□□ -2.16
NUP58-209ENST00000476553 F8P00451 2351 aa1.56□□□□□ -2.16
NUP58-209ENST00000476553 CELSR2Q9HCU4 2923 aa1.56□□□□□ -2.16
NUP58-209ENST00000476553 TFF3Q07654 80 aa1.56□□□□□ -2.16
NUP58-209ENST00000476553 TENM1Q9UKZ4 2725 aa1.54□□□□□ -2.16
NUP58-209ENST00000476553 SMIM2Q9BVW6 85 aa1.54□□□□□ -2.16
NUP58-209ENST00000476553 KIF21BO75037 1637 aa1.53□□□□□ -2.16
NUP58-209ENST00000476553 WT1-ASQ06250 92 aa1.53□□□□□ -2.16
NUP58-209ENST00000476553 ABCA12Q86UK0 2595 aa1.53□□□□□ -2.16
NUP58-209ENST00000476553 KNL1Q8NG31 2342 aa1.52□□□□□ -2.17
NUP58-209ENST00000476553 ANK2Q01484 3957 aa1.49□□□□□ -2.17
NUP58-209ENST00000476553 CSMD3Q7Z407 3707 aa1.49□□□□□ -2.17
NUP58-209ENST00000476553 BDP1A6H8Y1 2624 aa1.48□□□□□ -2.17
NUP58-209ENST00000476553 TRANK1O15050 2925 aa1.47□□□□□ -2.17
NUP58-209ENST00000476553 SPINK6Q6UWN8 80 aa1.47□□□□□ -2.17
NUP58-209ENST00000476553 DSPP15924 2871 aaKnown RBP1.46□□□□□ -2.18
NUP58-209ENST00000476553 H3BUA1 57 aa1.45□□□□□ -2.18
NUP58-209ENST00000476553 NDUFA1O15239 70 aa1.45□□□□□ -2.18
NUP58-209ENST00000476553 S4R3F8 94 aa1.44□□□□□ -2.18
NUP58-209ENST00000476553 PDE4DIPQ5VU43 2346 aa1.43□□□□□ -2.18
NUP58-209ENST00000476553 ABCA2Q9BZC7 2435 aa1.42□□□□□ -2.18
NUP58-209ENST00000476553 PIEZO1Q92508 2521 aa1.42□□□□□ -2.18
NUP58-209ENST00000476553 AKAP6Q13023 2319 aa1.42□□□□□ -2.18
NUP58-209ENST00000476553 SNRPGP62308 76 aaKnown RBP1.42□□□□□ -2.18
NUP58-209ENST00000476553 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
NUP58-209ENST00000476553 WFDC10BQ8IUB3 73 aa1.42□□□□□ -2.18
NUP58-209ENST00000476553 SMR3AQ99954 134 aa1.42□□□□□ -2.18
NUP58-209ENST00000476553 IGF2RP11717 2491 aa1.42□□□□□ -2.18
NUP58-209ENST00000476553 CLTCL1P53675 1640 aa1.41□□□□□ -2.18
NUP58-209ENST00000476553 TENM4Q6N022 2769 aa1.41□□□□□ -2.18
NUP58-209ENST00000476553 KAAG1Q9UBP8 84 aa1.4□□□□□ -2.19
NUP58-209ENST00000476553 FRAS1Q86XX4 4008 aa1.4□□□□□ -2.19
NUP58-209ENST00000476553 PCNX1Q96RV3 2341 aa1.39□□□□□ -2.19
NUP58-209ENST00000476553 VWFP04275 2813 aa1.39□□□□□ -2.19
NUP58-209ENST00000476553 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
NUP58-209ENST00000476553 DEFB106AQ8N104 65 aa1.39□□□□□ -2.19
NUP58-209ENST00000476553 DUOX1Q9NRD9 1551 aa1.38□□□□□ -2.19
NUP58-209ENST00000476553 ATRQ13535 2644 aa1.37□□□□□ -2.19
NUP58-209ENST00000476553 TPRP12270 2363 aaKnown RBP1.37□□□□□ -2.19
NUP58-209ENST00000476553 FBN2P35556 2912 aa1.36□□□□□ -2.19
NUP58-209ENST00000476553 PRLHP81277 87 aa1.36□□□□□ -2.19
NUP58-209ENST00000476553 CHD6Q8TD26 2715 aa1.35□□□□□ -2.19
NUP58-209ENST00000476553 SPINK1P00995 79 aa1.35□□□□□ -2.19
NUP58-209ENST00000476553 KRTAP2-3P0C7H8 128 aa1.35□□□□□ -2.19
NUP58-209ENST00000476553 KRTAP2-4Q9BYR9 128 aa1.35□□□□□ -2.19
NUP58-209ENST00000476553 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
NUP58-209ENST00000476553 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
NUP58-209ENST00000476553 APCP25054 2843 aa1.34□□□□□ -2.19
NUP58-209ENST00000476553 ZNF469Q96JG9 3925 aaPredicted RBP1.34□□□□□ -2.2
NUP58-209ENST00000476553 CSPG4Q6UVK1 2322 aa1.34□□□□□ -2.2
NUP58-209ENST00000476553 IGLV5-48A0A075B6I7 105 aa1.32□□□□□ -2.2
NUP58-209ENST00000476553 SPTA1P02549 2419 aa1.3□□□□□ -2.2
NUP58-209ENST00000476553 MROH2BQ7Z745 1585 aa1.3□□□□□ -2.2
NUP58-209ENST00000476553 DEFB131AP59861 70 aa1.3□□□□□ -2.2
NUP58-209ENST00000476553 DEFB135Q30KP9 77 aa1.3□□□□□ -2.2
NUP58-209ENST00000476553 PRRC2CQ9Y520 2896 aaKnown RBP1.3□□□□□ -2.2
NUP58-209ENST00000476553 OTOGQ6ZRI0 2925 aa1.3□□□□□ -2.2
NUP58-209ENST00000476553 GCC2Q8IWJ2 1684 aa1.29□□□□□ -2.2
NUP58-209ENST00000476553 PRKDCP78527 4128 aaKnown RBP1.29□□□□□ -2.2
NUP58-209ENST00000476553 BSNQ9UPA5 3926 aa1.29□□□□□ -2.2
NUP58-209ENST00000476553 AKAP13Q12802 2813 aa1.28□□□□□ -2.2
NUP58-209ENST00000476553 M0R2T5 61 aa1.28□□□□□ -2.2
NUP58-209ENST00000476553 U3KQA8 63 aa1.28□□□□□ -2.2
NUP58-209ENST00000476553 MMP24-AS1A0A0U1RRL7 71 aa1.27□□□□□ -2.21
NUP58-209ENST00000476553 H0YGG7 62 aa1.27□□□□□ -2.21
NUP58-209ENST00000476553 NOP10Q9NPE3 64 aaKnown RBP1.27□□□□□ -2.21
NUP58-209ENST00000476553 FAT2Q9NYQ8 4349 aa1.26□□□□□ -2.21
NUP58-209ENST00000476553 NCOR1O75376 2440 aa1.25□□□□□ -2.21
NUP58-209ENST00000476553 CELSR1Q9NYQ6 3014 aa1.23□□□□□ -2.21
NUP58-209ENST00000476553 HECTD1Q9ULT8 2610 aa1.22□□□□□ -2.21
NUP58-209ENST00000476553 A0A0C4DFX4 3053 aa1.21□□□□□ -2.22
NUP58-209ENST00000476553 CEP290O15078 2479 aa1.21□□□□□ -2.22
NUP58-209ENST00000476553 TNXBP22105 4242 aa1.2□□□□□ -2.22
NUP58-209ENST00000476553 CHD8Q9HCK8 2581 aa1.19□□□□□ -2.22
NUP58-209ENST00000476553 EP300Q09472 2414 aaPredicted RBP1.17□□□□□ -2.22
NUP58-209ENST00000476553 HUWE1Q7Z6Z7 4374 aaKnown RBP1.17□□□□□ -2.22
NUP58-209ENST00000476553 UNC79Q9P2D8 2635 aa1.16□□□□□ -2.22
NUP58-209ENST00000476553 PRM1P04553 51 aa1.16□□□□□ -2.22
NUP58-209ENST00000476553 TNRC18O15417 2968 aaPredicted RBP1.16□□□□□ -2.22
NUP58-209ENST00000476553 PKD1L2Q7Z442 2459 aa1.15□□□□□ -2.22
NUP58-209ENST00000476553 NOTCH1P46531 2555 aa1.15□□□□□ -2.23
NUP58-209ENST00000476553 PKD1L1Q8TDX9 2849 aa1.14□□□□□ -2.23
NUP58-209ENST00000476553 ZFYVE26Q68DK2 2539 aa1.13□□□□□ -2.23
NUP58-209ENST00000476553 M0QY20 66 aa1.12□□□□□ -2.23
NUP58-209ENST00000476553 POLR2KP53803 58 aaKnown RBP1.12□□□□□ -2.23
NUP58-209ENST00000476553 LYSTQ99698 3801 aa1.12□□□□□ -2.23
NUP58-209ENST00000476553 CREBBPQ92793 2442 aa1.1□□□□□ -2.23
NUP58-209ENST00000476553 A8MTW9 85 aa1.1□□□□□ -2.23
NUP58-209ENST00000476553 SRRM2Q9UQ35 2752 aaKnown RBP1.09□□□□□ -2.23
NUP58-209ENST00000476553 PTPN13Q12923 2485 aa1.09□□□□□ -2.23
NUP58-209ENST00000476553 RPL39P62891 51 aaKnown RBP1.08□□□□□ -2.24
NUP58-209ENST00000476553 UBR5O95071 2799 aaPredicted RBP1.08□□□□□ -2.24
NUP58-209ENST00000476553 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
NUP58-209ENST00000476553 NBASA2RRP1 2371 aa1.05□□□□□ -2.24
NUP58-209ENST00000476553 C9orf92A6NGG3 77 aa1.05□□□□□ -2.24
NUP58-209ENST00000476553 CLPSL2Q6UWE3 100 aa1.05□□□□□ -2.24
NUP58-209ENST00000476553 MAP1BP46821 2468 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms